Onychostoma macrolepis: 131551800
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Entry
131551800 CDS
T09350
Symbol
trim55a
Name
(RefSeq) tripartite motif-containing protein 55a
KO
K10654
tripartite motif-containing protein 55
Organism
omc
Onychostoma macrolepis
Pathway
omc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131551800 (trim55a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131551800 (trim55a)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
131551800 (trim55a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
Sina_RING
CoiA_N
LTXXQ
Hex_IIIa
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
131551800
NCBI-ProteinID:
XP_058650908
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All DBs
Position
02:complement(26883568..26889584)
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AA seq
468 aa
AA seq
DB search
MNVGLDYWCPRTRETMESLERQLICPICLEIFTKPVVILPCQHNLCRKCANDIFQASNPY
LPTRGGSSLGSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQESSSSKPEPEL
KNDVLLCEEHQDEKINIYCVTCSVPTCSLCKVFGSHQSCEVAPLKSVYETQKTELSDGVA
VLVGNNDRIQGIISQLEESCRTVEENGRRQKSRVCEWFDRLYALLEERRGELTLKITAEQ
QEKLDYIGGLQRKYREHLDNTAKLVETGIQTMEESEMAIFLQNTKPLLQKIAEGRNVSHL
EKVERGYEKMDHFTANFSPERRAILSIDFTKDDNEEDDDEEEELAGTVNPETQTSSVATP
APGQQRQTPVPTSPPMAASGATPIPTPQRQTPVPTSPPMAADSTQMSSKPSQSVNTNAAE
NTPLFTPTPDVSHTSSTDAPAQVTAGPNQTSEDSPRHVFSFSWLNMPK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgggtttggattattggtgcccaagaacgcgcgagaccatggagagtttggag
aggcagctgatatgccctatttgccttgagatcttcaccaaaccggtggtgatcttaccg
tgccagcacaacctctgccgcaaatgtgccaatgacatctttcaggcctcaaacccctac
ttgcccacacgaggaggttcttcattaggctctggcggccggttccgctgcccatcctgt
agacatgaagtggttctggatagacatggggtgtatggcctgcaaaggaacctgctggtg
gagaacatcatagatatgtacaaacaggaatccagcagcagtaagcctgaaccagaactg
aagaacgatgtgttgctgtgtgaggagcatcaggatgagaagatcaatatatactgtgtg
acctgctctgttcccacttgttcactatgtaaagtttttgggagtcatcagtcctgtgaa
gttgctccgctcaaatcggtctacgaaacacagaaaaccgagttgtctgatggcgttgct
gtgttggttggcaacaatgacagaattcagggcatcatcagtcagctagaggaaagctgc
agaactgtggaggagaatggtcgcaggcagaagtctcgtgtatgtgagtggtttgatcgt
ctgtacgctcttctggaagagcgcagaggagaacttacactgaagatcaccgcagaacag
caggagaaacttgactacatcggtggcctacagcgcaagtacagagagcacctggataac
acagccaagctagtggagacaggaattcagacgatggaggaatctgagatggccatcttc
ctgcagaacacgaagcctctactacaaaagatagcagaaggcaggaatgtgtctcattta
gaaaaggtggaacgtggatatgaaaaaatggatcatttcactgcaaacttcagccctgaa
cgaagagcaatactcagcatagattttaccaaggatgacaatgaagaggatgatgatgaa
gaggaagaattagcaggtactgttaatccagagacccagacatcttcagtggctacgcct
gccccgggccagcagagacaaacccctgtaccgacctctccacccatggcagcttcaggg
gctacgcccatcccaaccccgcagagacaaacccctgtaccgacctctccaccaatggca
gcagactccacccagatgtcatcaaaacctagccaatcagtaaacaccaacgcagcagag
aacacacccttatttacacccactccagacgtcagtcacacctcttctacagatgcacct
gctcaggtaactgccggtcccaaccagacatctgaggatagcccacgccacgttttctct
ttttcctggttaaatatgccaaaataa
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