Onychostoma macrolepis: 131552009
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Entry
131552009 CDS
T09350
Name
(RefSeq) toll-like receptor 4 isoform X1
KO
K10160
toll-like receptor 4
Organism
omc
Onychostoma macrolepis
Pathway
omc04145
Phagosome
omc04217
Necroptosis
omc04620
Toll-like receptor signaling pathway
omc04621
NOD-like receptor signaling pathway
omc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
131552009
09143 Cell growth and death
04217 Necroptosis
131552009
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
131552009
04621 NOD-like receptor signaling pathway
131552009
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
131552009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131552009
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omc04054
]
131552009
04090 CD molecules [BR:
omc04090
]
131552009
00536 Glycosaminoglycan binding proteins [BR:
omc00536
]
131552009
Membrane trafficking [BR:
omc04131
]
Endocytosis
Phagocytosis
Toll-like receptors
131552009
Pattern recognition receptors [BR:
omc04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
131552009
CD molecules [BR:
omc04090
]
Proteins
131552009
Glycosaminoglycan binding proteins [BR:
omc00536
]
Hyaluronan
Cell surface receptors
131552009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_1
LRR_14
LRR_9
LRR_R13L1-DRL21
DHU1_N
ThsB_TIR
DUF4327
Motif
Other DBs
NCBI-GeneID:
131552009
NCBI-ProteinID:
XP_058651323
LinkDB
All DBs
Position
13:10406280..10420387
Genome browser
AA seq
817 aa
AA seq
DB search
MTFFTVSAFMIYFSISAGESCTKITENLHYSCMGRNLSYIPPSIPSSVQILDFSFNVLKH
LQKTVFPVLYFLQVLDLSRCQIKHIENDTFYNVKNLTTLILTGNPIAYFGPGCLNSLHNL
QRLVLVDVGLSSLQLQMNNLTKLQELRVGTNIIQSISLPPFMSTFKDFSLLDLHANNISI
IKTDHTVLLREISRNMTLILSRNPLLYIEPGAFKDIYLRELNIRSAFVSPAAQKAGLKAL
YGLNVKMLMFGKYRCDYKILSSDANYLDGLCFINFHEVYYYMKEKHNVPVSIFRCMKNAT
NVAVKGGIIREIANVPFYEIKELYLVSNQLDTVPGKQLAHLHTLEKLVFTNNVATQIPDF
IDMPSLQYVDLSSNQITLTSCCSFFSGTPQLRYLNLSLNPQISLSTGPFDGLGSLEILDF
HHTRVVGMGYLSLFSNLKYLRYLDISYSSVIFINIYCFYGLRNLNVLKMAGSNFQGDVAR
YLFNNLTFLEHLDMSYCRVVELHPSSFKNLQRLRLLNLRGNNLMNIDFLALPNLKQLTSL
YVDKNSITSIPLHVLQTLPTNLSEFDLSSNPIDCSCSQTDFILWIMQNQKVLKKLENIFC
KTFSPNLDFRATDFDIDSCVHKKRLTIVLSVCFVTVVVLFSFLVYRFQFYLQYCCILLRG
YRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIQLCLHMRDFQAGKSIASNII
DEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFMMERSANIIIIILEDVEERKSKKVF
GLHKHLKKNTYLKWSRDPFSNMRFWIRLRKAIIATNQ
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgactttctttactgtaagtgctttcatgatatatttttccataagtgctggagaatca
tgtacaaaaattactgagaatctgcactactcatgcatgggaagaaacctcagttacata
ccacccagtataccttcctctgttcaaattctggatttcagttttaatgttttgaaacac
ttacagaagactgttttccctgttttgtatttcctgcaagtccttgatctgtcaagatgc
caaatcaagcacattgaaaatgatactttctacaatgtgaagaatttgactactttgatt
ctcactggaaatcctattgcatattttggacctggatgcttaaattctttacataatcta
caaagactagttcttgtggatgttggtctctcatcattacagcttcaaatgaataaccta
accaagctgcaggagcttagagtcgggacaaatatcatccagtccatatctctccctcca
ttcatgagcaccttcaaagatttcagtttactcgatctacatgccaataatatatccatc
atcaaaactgatcacacagttttgttgcgagagatcagcagaaacatgactttgatcctc
tctaggaatccgttattatacattgaaccaggagctttcaaagacatttatcttagagaa
ctgaacatccgatctgcctttgtttcacctgctgctcagaaagctggtctaaaagctcta
tatggtcttaatgtcaaaatgctcatgtttggaaagtacaggtgtgattacaagattttg
tcatcagatgcaaattatttagatggtctttgctttattaattttcatgaggtatattat
tacatgaaagaaaaacataatgtgccagttagtatctttcgctgtatgaaaaatgcaaca
aatgtagctgtgaagggtggtataattcgtgaaatagcaaatgtgccattttatgaaatc
aaggagctttatttggtttccaatcaattagatactgtgccaggcaaacaacttgcacat
ctccatactttagaaaaactagtatttaccaacaatgttgcaacccaaattccagacttc
atagacatgcctagtcttcagtatgtggatctgagttcaaaccaaattacattaacatca
tgttgctcatttttttctggcacccctcaattgaggtatctaaatttgagtctaaatcca
caaattagtctttctacaggaccatttgatggacttggttcccttgagattctagatttc
catcatacaagggttgtaggtatgggatacctttctcttttttctaacttgaagtatttg
agatatctagatatttcttattcaagtgtcatctttattaacatatattgcttttatgga
ttgaggaatcttaatgttcttaagatggccggcagtaattttcagggtgatgtagcaaga
tatttgtttaataatctcacttttctagagcatcttgacatgtcgtattgccgtgtggta
gagttacatccaagctcattcaaaaatcttcaaaggcttagacttttaaatttgagagga
aacaatttaatgaatatagattttctggccctcccaaacctgaaacagttaacttcactt
tatgtcgataaaaacagcattactagcatcccacttcatgttctccaaacgttgcccaca
aatctttcagagtttgatttgtcgtctaaccccatcgattgctcctgctcccagacagat
tttattttgtggattatgcaaaatcagaaagttttgaagaaactagaaaatattttctgt
aaaaccttttcaccaaatttagattttagagcaacagactttgacattgacagctgtgtg
cacaagaaaagactcacaattgttttatctgtatgttttgttacagtagtagttcttttt
tcattcttggtttataggttccagttttatcttcagtattgctgtattctactgagaggc
tatagatcacctggtcaacaagaatgttcctatgacgcatttgtgattttctccagctat
gatgaagtctgggtcatgaatgaactgatggagaatctggagaacggtgttccacctatt
cagctttgccttcatatgcgggactttcaagcagggaagtccatcgcctctaacattatc
gatgaaggaataatgggcagtcgtaaaatcattgtggtcgtgtctcaacacttcattgat
agtgcctggtgtcgctttgagtttgaattagctcagtctcgctttatgatggaacgcagt
gccaacatcatcatcatcattctggaagatgtggaagagaggaagtctaagaaagtgttt
ggacttcataagcatctgaaaaagaacacgtacctaaagtggagcagagaccctttcagt
aacatgagattctggatacgcctcaggaaagctattattgccacgaaccaataa
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