KEGG   Onychostoma macrolepis: 131552009
Entry
131552009         CDS       T09350                                 
Name
(RefSeq) toll-like receptor 4 isoform X1
  KO
K10160  toll-like receptor 4
Organism
omc  Onychostoma macrolepis
Pathway
omc04145  Phagosome
omc04217  Necroptosis
omc04620  Toll-like receptor signaling pathway
omc04621  NOD-like receptor signaling pathway
omc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    131552009
  09143 Cell growth and death
   04217 Necroptosis
    131552009
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    131552009
   04621 NOD-like receptor signaling pathway
    131552009
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    131552009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omc04131]
    131552009
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:omc04054]
    131552009
   04090 CD molecules [BR:omc04090]
    131552009
   00536 Glycosaminoglycan binding proteins [BR:omc00536]
    131552009
Membrane trafficking [BR:omc04131]
 Endocytosis
  Phagocytosis
   Toll-like receptors
    131552009
Pattern recognition receptors [BR:omc04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   131552009
CD molecules [BR:omc04090]
 Proteins
  131552009
Glycosaminoglycan binding proteins [BR:omc00536]
 Hyaluronan
  Cell surface receptors
   131552009
SSDB
Motif
Pfam: LRR_8 LRR_4 TIR LRR_5 TIR_2 LRR_1 LRR_14 LRR_9 LRR_R13L1-DRL21 DHU1_N ThsB_TIR DUF4327
Other DBs
NCBI-GeneID: 131552009
NCBI-ProteinID: XP_058651323
LinkDB
Position
13:10406280..10420387
AA seq 817 aa
MTFFTVSAFMIYFSISAGESCTKITENLHYSCMGRNLSYIPPSIPSSVQILDFSFNVLKH
LQKTVFPVLYFLQVLDLSRCQIKHIENDTFYNVKNLTTLILTGNPIAYFGPGCLNSLHNL
QRLVLVDVGLSSLQLQMNNLTKLQELRVGTNIIQSISLPPFMSTFKDFSLLDLHANNISI
IKTDHTVLLREISRNMTLILSRNPLLYIEPGAFKDIYLRELNIRSAFVSPAAQKAGLKAL
YGLNVKMLMFGKYRCDYKILSSDANYLDGLCFINFHEVYYYMKEKHNVPVSIFRCMKNAT
NVAVKGGIIREIANVPFYEIKELYLVSNQLDTVPGKQLAHLHTLEKLVFTNNVATQIPDF
IDMPSLQYVDLSSNQITLTSCCSFFSGTPQLRYLNLSLNPQISLSTGPFDGLGSLEILDF
HHTRVVGMGYLSLFSNLKYLRYLDISYSSVIFINIYCFYGLRNLNVLKMAGSNFQGDVAR
YLFNNLTFLEHLDMSYCRVVELHPSSFKNLQRLRLLNLRGNNLMNIDFLALPNLKQLTSL
YVDKNSITSIPLHVLQTLPTNLSEFDLSSNPIDCSCSQTDFILWIMQNQKVLKKLENIFC
KTFSPNLDFRATDFDIDSCVHKKRLTIVLSVCFVTVVVLFSFLVYRFQFYLQYCCILLRG
YRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIQLCLHMRDFQAGKSIASNII
DEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFMMERSANIIIIILEDVEERKSKKVF
GLHKHLKKNTYLKWSRDPFSNMRFWIRLRKAIIATNQ
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgactttctttactgtaagtgctttcatgatatatttttccataagtgctggagaatca
tgtacaaaaattactgagaatctgcactactcatgcatgggaagaaacctcagttacata
ccacccagtataccttcctctgttcaaattctggatttcagttttaatgttttgaaacac
ttacagaagactgttttccctgttttgtatttcctgcaagtccttgatctgtcaagatgc
caaatcaagcacattgaaaatgatactttctacaatgtgaagaatttgactactttgatt
ctcactggaaatcctattgcatattttggacctggatgcttaaattctttacataatcta
caaagactagttcttgtggatgttggtctctcatcattacagcttcaaatgaataaccta
accaagctgcaggagcttagagtcgggacaaatatcatccagtccatatctctccctcca
ttcatgagcaccttcaaagatttcagtttactcgatctacatgccaataatatatccatc
atcaaaactgatcacacagttttgttgcgagagatcagcagaaacatgactttgatcctc
tctaggaatccgttattatacattgaaccaggagctttcaaagacatttatcttagagaa
ctgaacatccgatctgcctttgtttcacctgctgctcagaaagctggtctaaaagctcta
tatggtcttaatgtcaaaatgctcatgtttggaaagtacaggtgtgattacaagattttg
tcatcagatgcaaattatttagatggtctttgctttattaattttcatgaggtatattat
tacatgaaagaaaaacataatgtgccagttagtatctttcgctgtatgaaaaatgcaaca
aatgtagctgtgaagggtggtataattcgtgaaatagcaaatgtgccattttatgaaatc
aaggagctttatttggtttccaatcaattagatactgtgccaggcaaacaacttgcacat
ctccatactttagaaaaactagtatttaccaacaatgttgcaacccaaattccagacttc
atagacatgcctagtcttcagtatgtggatctgagttcaaaccaaattacattaacatca
tgttgctcatttttttctggcacccctcaattgaggtatctaaatttgagtctaaatcca
caaattagtctttctacaggaccatttgatggacttggttcccttgagattctagatttc
catcatacaagggttgtaggtatgggatacctttctcttttttctaacttgaagtatttg
agatatctagatatttcttattcaagtgtcatctttattaacatatattgcttttatgga
ttgaggaatcttaatgttcttaagatggccggcagtaattttcagggtgatgtagcaaga
tatttgtttaataatctcacttttctagagcatcttgacatgtcgtattgccgtgtggta
gagttacatccaagctcattcaaaaatcttcaaaggcttagacttttaaatttgagagga
aacaatttaatgaatatagattttctggccctcccaaacctgaaacagttaacttcactt
tatgtcgataaaaacagcattactagcatcccacttcatgttctccaaacgttgcccaca
aatctttcagagtttgatttgtcgtctaaccccatcgattgctcctgctcccagacagat
tttattttgtggattatgcaaaatcagaaagttttgaagaaactagaaaatattttctgt
aaaaccttttcaccaaatttagattttagagcaacagactttgacattgacagctgtgtg
cacaagaaaagactcacaattgttttatctgtatgttttgttacagtagtagttcttttt
tcattcttggtttataggttccagttttatcttcagtattgctgtattctactgagaggc
tatagatcacctggtcaacaagaatgttcctatgacgcatttgtgattttctccagctat
gatgaagtctgggtcatgaatgaactgatggagaatctggagaacggtgttccacctatt
cagctttgccttcatatgcgggactttcaagcagggaagtccatcgcctctaacattatc
gatgaaggaataatgggcagtcgtaaaatcattgtggtcgtgtctcaacacttcattgat
agtgcctggtgtcgctttgagtttgaattagctcagtctcgctttatgatggaacgcagt
gccaacatcatcatcatcattctggaagatgtggaagagaggaagtctaagaaagtgttt
ggacttcataagcatctgaaaaagaacacgtacctaaagtggagcagagaccctttcagt
aacatgagattctggatacgcctcaggaaagctattattgccacgaaccaataa

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