Onychostoma macrolepis: 131552018
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Entry
131552018 CDS
T09350
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131552018 (zswim8)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
131552018 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
131552018
NCBI-ProteinID:
XP_058651337
LinkDB
All DBs
Position
13:14484965..14519014
Genome browser
AA seq
1931 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRVRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTHEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASMCDEMVVLWRLA
VLDPTMSPQRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVECCYFNWEVAY
PLPGITYCSADKKNASFCWARMVQQQRGAKAGTSGEPGEGGRGGTSEGSSSEHKSRSNSH
LPQQEVAVRPKETIVGKRKGVSGVNSGGVLVCLGGRVSLSLQEGGKGMYKASSSSPSAGS
KSKLTQSSKGSCGSSSGVSGKHPSAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEASNT
FDFLPPPPEMLPSPSPLLREPLKYSGTASKERAFETKRVLPSAADSHACTIATPVVVAME
KEVEVEADLDENGGDEDPVDDTQPSASLPSKAQRGCREGDGSGASGASGPQAAEAAAGAD
AVGEDDYQAYYLSAASEEGADRGVADSNHEEEPDIFAGIKPLEQEGRMEILFACAEALYA
HGYSNEACRLAVELARDLLSNPPDLKVEQPQTKGKKSKVSTSKQTQVATNTLSKVAFLLT
VLSERLELHNLAFNTGMFSLELQRPPASTKALEVKLAYQESEVVALLKKIPLGLVEMTSI
RDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEMPGDEELGF
EAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQ
THKPQTLSSFYSSKPATSSQKSPSKHATHGASGATGGVSKHTPSATSAAVQGVTGGGAAG
QQGSLVGGGVQSTVTGDGIADNRDQEGAQSTSCEQQSEAAPFKPEGTVPSRLALGGRGAY
GTRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWTAASWGRGQDSDSIS
SSSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKGRRPECHAPHVPNQPSEAAAHFYFELA
KTVLIKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYS
SHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAAELALSC
LPHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYE
QTVGGGSGAQREGSGRCGANGGAGRTPPEGVCGILDNTGVLDTSGVAAVTTTVTAAAVVP
VISVGSTIYQSHALPGSAMAHTQGLHPYTTIQTHLPTVCTPQYLGHPLQHVPRPAVFPVS
GAAYPQVYDLRKTYQPGFKSVCLSSQGMHPAFIGAQYPFSVATGPHPPMAATAVTFPGVP
VPSMTQIAVHPYHTAEAALPLSTTVAAGGVHSGSAIQAIQGASLPGLSSQPASLVSAPFP
VEDEQHSQPISQQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGL
AARLGVNHVYQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQ
AYLQYIHHRLIHLTPADYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQ
RISLEMATFSP
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgttcgctgagtgggaagatggagagaggttctcctttgaagattcggac
cgttttgaggaggactccctgtgctcattcatatcagaggcggaaagtctctgccagaac
tggagaggatggaggaaacagtctgccggcccaaattcacccactgtgaagattaaagat
ggacaagttattcctctggtggagctgtcggccaagcaggtggcgttccatattccattt
gaggttgtggaaaaagtctatcctcccgttcctgagcagctgcaattgcggattgcctac
tggagcttcccagagaacgaggaggacatcagattatactcctgtttggccaacggcagc
cctgatgagttccagcgtggcgagcagctctatagagtgagggctgtgaaagaccctctg
cagataggtttccacctcagtgccacagtagtgtcaccccaggctggccaatcaaaagga
gcctacaatgtggctgtaatgtttgaccgctgccgcatcacttcctgcagctgcacctgt
ggagcaggagccaaatggtgtgcccacgttgtggccctctgcctcttcagaattcataat
gcttctgcggtgtgtcttcgagcacctgtgtcagagtcgctgtccagattacagcgggat
caactccagaagtttgcacaatacctcatcagtgaactcccacagcagatattgccgaca
gctcagcgtcttttagatgagcttctgtcctcccagtctaccgctattaacaccgtgtgt
ggagccccggatcctactgctggcccttcagcctctgaccagagcacctggtatctagat
gagtccaccctcagtgacaacataaagaagaccttgcacaagttctgtggcccatcacct
gtggtgtttagtgatgtgaactccatgtacctgtcatccactgaacctccggcagctgct
gaatgggcttgtttgctgaggcccctgcgaggtagagagccagagggcatctggaacctt
ctgtccatcgtcagagagatgtttaagaggagagacagcaatgctgcgcctctgttagaa
atcctcactgaacagtgtctcacccatgaacagatcattggctggtggtatagtgtgagg
acatccgcctctcacagcagtgctagcgggcacacaggtcgcagtaatggccagacagag
gttgcagcacatgcgtgtgccagcatgtgtgatgaaatggttgtcttgtggagactggca
gtgctagaccctaccatgagtccccagaggcgtttggaacttgctgcccagctaaagcag
tggcatctgaaggttatagagattgtgaaacgggggcagcaccgcaagtctcttgacaaa
ctcttccagggcttcaaaccagctgtggagtgctgctacttcaactgggaagtggcctac
cctttacctggcatcacttattgcagtgcagataagaaaaatgcctcattttgttgggcc
aggatggtgcagcagcagaggggcgctaaagctgggaccagtggggaaccaggagaagga
ggtcgcggtggaacatcagaaggttcttcctctgaacacaagtcacggagcaactcccat
cttccccagcaggaggtggctgtccgccctaaggagaccattgtgggcaagaggaaagga
gtgtctggcgtgaacagtggaggcgtgctggtttgtctaggtggaagggtctctctctca
cttcaggaaggaggtaaaggcatgtataaagccagtagctcctccccatcagctggtagt
aagtccaagcttacacagagcagcaagggttcatgtggaagttcaagtggcgtcagcggg
aagcaccccagtgctaaacggcgaactagcagtgaggacagctctctagagcctgatatg
gcagagctgagtctggatgatggctccagcctggcgctcggagcggaggcctccaacacc
tttgatttccttcctcctccgccggagatgttgccctcacccagccctcttctccgagag
ccactcaaatacagtggtactgcttcaaaagagcgtgcttttgagacaaaacgtgtgctg
ccctctgctgctgattcccatgcctgcaccattgcaactccagtagtggtagctatggag
aaagaggtggaagtggaggcagatctggatgagaacggaggagacgaggaccctgtagat
gatactcagccctctgcatcgctccccagcaaggctcagcggggctgtagagagggagat
gggagtggggcttccggggcctcaggacctcaagcagccgaggccgcagcaggagcagat
gctgtgggtgaagatgactatcaagcatattaccttagtgctgcatcagaagagggagcg
gatagaggggttgcagacagcaaccatgaagaagagccagacatctttgctgggattaaa
cctctggagcaggagggcaggatggagatactgtttgcctgtgcagaggctctctatgct
catggctatagtaatgaagcatgccgattggctgttgaacttgctcgagatttgctgtct
aacccacccgacctaaaggtggagcagccgcaaacaaagggtaagaaaagtaaagtgtca
accagtaaacagacacaggtggccactaacaccttatctaaagtagccttcctgttgact
gtgttgagtgagaggctggagctccataacctggcattcaacactggcatgttctccttg
gagctgcagagaccaccagcttctactaaagctctggaggtgaagctggcatatcaggag
tcagaggtggtggctttgctgaagaagattcctctgggtcttgttgaaatgacttccata
agggacagagcagagcagctccgtgatggaaacttctgcgactatcgaccggttctgccc
ctcatgctggcaagcttcatatttgacgtactgtgcacccctgtggtctctcccacgggc
tctcgacctcctagccggaaccgtaacaatgaaatgcctggtgatgaggagctgggattt
gaggcagctgtagcagctcttggcatgaagacaacggtcagtgaggcagagcatcctctg
ctatgtgaaggcacacggagagagaaaggagacctggctctagcactgatgatcacttat
aaagatgaccaaagcaagcttaaaaagattctggacaagctcctggatcgtgagagccag
acccataagcctcagactctgagctcgttttactctagcaaaccagccaccagcagccaa
aagagcccatctaaacatgccacccatggtgctagcggagccacgggaggagtgtcaaag
cacaccccttcagcaacatcagctgctgtgcagggcgtgaccggtgggggagcggcaggg
cagcagggcagtttggtgggtggtggagttcagagcacagtgactggagatggcatcgct
gacaacagagatcaagagggtgcacagtcgacctcctgtgagcagcagagtgaagctgcg
cccttcaagcccgagggcactgtgcccagtcgtctggcactggggggccgtggggcatac
ggtacgcgctgctggggatcacctgtacggcagaaaaagaaacacactggcatggcaagc
attgacagtagtgctccagagaccacctcagacagctctcctaccctcagtcgacgtcca
cttcgaggtggttggacagctgcttcctgggggagaggccaggacagtgacagcattagc
agctcttcctctgattcacttggctcatcgtcatccagcggctcacgcagagctggagga
ggagccagagccaagagtactgacaccagcaggtataaaggccgccggcctgaatgccac
gctccacacgtgcccaaccagccatccgaggcagctgcccatttttactttgagctggcc
aagactgtgctgattaaagctggtggaaacagctccacctccattttcactcaaccctct
gccagtggaggccatcaaggaccccaccgcaacctgcatctgtgtgcctttgaaattggc
ctgtatgccctcggcctgcataattttgtgtctccaaactggctgtcaaggacgtattcc
tcacatgtatcctggattacaggccaggccatggagattgggagtgctgccctcaacatc
cttgtggaatgctgggatgggcacctcacacctccggaggtggcgtcactcgcagaccgt
gcatcacgagcacgggatcccaacatggtgcgtgctgcggcagagctggccttgagctgc
ttgcctcacgctcacgccctcaaccccaacgagattcagagagccctggtgcagtgcaag
gagcaggataatgtgatgctggagaaagcttgcatggcagttgaggaggctgcaaaggga
ggtggtgtttatcctgaagtcttgtttgaggtggctcatcagtggtattggctgtatgag
caaacagtgggtggaggctctggggcccagcgagaggggtctggccgctgtggagccaat
ggcggagcaggaagaacaccacccgagggagtctgtggtatcctggataacacgggagtc
ttggacacttcaggtgtcgcagctgtaactacaacagtgacggcagccgctgtagttcct
gtcatttctgtcggctccactatctatcagtcacatgcgctgccgggctcagccatggca
cacacgcaaggcctgcatccctacaccaccatccaaacccatctgcccaccgtctgcacc
ccgcagtatttgggccacccccttcagcacgttccccgtcctgctgtcttccccgtgtct
ggggcggcctacccacaagtatatgacttgaggaagacgtatcaacctggttttaagagc
gtctgtttgtcttctcagggaatgcaccctgcttttattggtgctcagtacccattctct
gtggctactggccctcatcctcctatggcggcgactgctgtcactttccctggagtccca
gtgccgtccatgactcagatcgctgtccacccgtaccataccgcagaggcagccctgcct
cttagcactactgtggcagcaggaggagtacactcaggctctgccatccaggctattcag
ggggcttctcttccaggactctcatcccagcctgcctcattggtcagcgcacccttccct
gtggaagacgagcagcacagtcaaccaatcagccagcagggcctgcactacctccactcg
gcctacagagtcggcatgctggccttggagatgttgggaaggagggcccacaacgatcat
ccaaacaacttttcccgtagccccccgtacaccgaagacgtcaaatggctgttgggcctg
gctgcgcgtcttggtgtgaaccatgtgtaccagttttgtgtgggggcagcgaaaggtgtt
cttagtccgtttgtcctgcaggagatcattatggaggctctgcagaggttaaaccctgca
catatccacgcacacctccgcactcctgccttccatcagcttgtgcagcgctgccagcag
gcctacttacagtacatccatcataggctgatccatctgactcccgcggactacgacgac
tttgtgaacatcatccgaagtgcccgcggggcgttttgcctgacaccagttggcatgatg
cagttcaatgatgtgctgcagaacctgaagaggggcaaacagactaaagaactatggcag
cggatctcgttggagatggccactttctcaccctga
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