Onychostoma macrolepis: 131552193
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Entry
131552193 CDS
T09350
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
omc
Onychostoma macrolepis
Pathway
omc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131552193 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omc04990
]
131552193 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
omc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
131552193 (pdlim1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
131552193
NCBI-ProteinID:
XP_058651785
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All DBs
Position
13:complement(16752196..16759064)
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AA seq
322 aa
AA seq
DB search
MPLRVVLQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQADLCMGDMILAIDGESTEGM
THLEAQNKIKACIEEMVLSIDRSESKMWSPLVTEEGKANPYKMNLANKETQDVKQIGSAH
NRSAMPFSSGSPRVVTNMYNNPSGLYSSENIKSFNSAVDDVQTSAASIEANKNPDPCIPG
QPKPALAADSEVYKMLQENQELNEPPRQSASFKVLQEILETGDTEKPSGFRSVKAPSTKI
GASLGNPEKLSLCDKCGSGIVGMTVKLRDKFRHPECYVCTDCGINLKQKGHFFVEDKIYC
EKHARERFTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctttacgagttgttttacaaggtcccggaccgtggggcttccgtctggtcggggga
aaagatttcgaacaacctctgactatctcgagggtgaccccaggaagcaaagcggctcaa
gctgacctttgtatgggggacatgatcctggccatagatggagagtcaacagagggcatg
actcacctggaagcacagaataaaatcaaagcttgcattgaggaaatggttctttccatt
gacagatcagagtcgaaaatgtggtctccactggtcactgaagaaggaaaggccaatcca
tacaagatgaatctggccaataaagaaacacaggatgtgaaacaaataggctctgctcat
aacaggagcgccatgcctttcagttctggcagtccaagggtggtcaccaacatgtacaat
aacccctctggcctgtattcctctgagaacattaagagtttcaacagtgcagtggatgac
gttcagacttctgctgcctccattgaagccaataagaacccagatccctgtatacctggc
cagccaaagcctgcgttagctgcagactctgaggtgtacaaaatgctgcaggagaatcaa
gaattaaatgagcctcctcgccagtctgcctcttttaaagttctgcaggagatcctggaa
accggtgatacagagaaaccctcaggcttcagaagtgtcaaggctcccagcacaaaaatt
ggagcctcgcttgggaatcctgaaaagctctctctttgtgacaaatgtggttcagggatt
gtaggaatgacggtcaaacttcgagataagtttcgccacccagaatgctacgtctgcaca
gactgcgggatcaatcttaagcaaaaaggacacttttttgtcgaggacaagatttactgc
gagaaacacgcacgtgagcgcttcactcctccagagggttatgatgtcgtcaccgttttt
cctaagtag
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