Onychostoma macrolepis: 131552285
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Entry
131552285 CDS
T09350
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
omc
Onychostoma macrolepis
Pathway
omc03022
Basal transcription factors
omc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131552285 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
131552285 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131552285 (mnat1)
03400 DNA repair and recombination proteins [BR:
omc03400
]
131552285 (mnat1)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131552285 (mnat1)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131552285 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
zf-UDP
zf-C3HC4
zf-RING_2
zf-P11
DUF604
TRAF6_Z2
Motif
Other DBs
NCBI-GeneID:
131552285
NCBI-ProteinID:
XP_058651933
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All DBs
Position
13:19981712..20001446
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVEMLFVRGSGNCVQCNTPLRKSNFRV
QLFEDPAIDKEVEIRKKVLKIYNKREFDFPALKEYNDYLEQVEDIVFNLTNNIDVERTKQ
IMEQYQRDNKDVIQRNKAKLTREQEELEELLLQEQQDSEQRRLDTLQEEQRQLQAKRKNK
QALLDELESSKLPAAMLLAQHKDRASQLETQIEKQKQNVKPANIFSTGIMMGQTVSFASV
SRMEEVLYVYQPLCIDTYGPPVPELDQLGRLGYLNHVRTASPQDQAGGYSSGLACHRAIQ
DAFSGLFPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagggatgcccgaggtgcaagacgaccaaatacagaaatccatctctgaag
ctgatggtgaatgtgtgcggacacacgctgtgtgagagctgtgtggagatgctgtttgtc
cgtggctcaggtaactgtgtgcagtgcaacactcctctcagaaagagtaatttccgtgtg
cagctctttgaagatccagccatcgataaagaggtggagatccgcaagaaggttctcaaa
atctataataagagggaatttgattttcccgctctgaaagaatataatgactacctggag
caagtggaagacattgtgtttaacctgactaataacatagatgttgaaaggaccaagcag
attatggaacagtaccagcgagataacaaagacgttatacagagaaacaaagccaaacta
acacgtgagcaggaggagttggaagagctgttgttacaggagcagcaggattcagagcag
aggagactggacaccctgcaggaggaacagagacaactacaggccaagaggaaaaacaaa
caggccctgctggatgagctggaaagttccaagttacctgcggctatgctgttggcccaa
cataaagatcgagcttctcaactggagacccagatagaaaaacaaaagcaaaatgtcaag
ccagcaaacatcttctctactggaataatgatgggtcagactgtttcttttgcttccgtg
tctcgtatggaggaggtgttgtacgtctatcagcctctgtgcattgacacatacgggccg
cccgttccagaactggatcaattgggccgattagggtatctgaatcatgtgcgcacagcg
tctccgcaggatcaggctggtggttattcatcaggattggcatgccatcgtgccatccaa
gatgctttcagtggcctcttcccctcatga
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