Onychostoma macrolepis: 131552302
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Entry
131552302 CDS
T09350
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
omc
Onychostoma macrolepis
Pathway
omc04137
Mitophagy - animal
omc04140
Autophagy - animal
omc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131552302 (hif1aa)
04137 Mitophagy - animal
131552302 (hif1aa)
04148 Efferocytosis
131552302 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131552302 (hif1aa)
Transcription factors [BR:
omc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
131552302 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
131552302
NCBI-ProteinID:
XP_058651965
LinkDB
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Position
13:20042673..20058880
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AA seq
729 aa
AA seq
DB search
MLESRLTMDSVAPGKKRVSSERRKEKSRDAARCRRGKESEVFYELARELPLPHSVTSNLD
KASVMRLALSYLRLRKLLNTDVPNVESELDSQWNSSYLKALDGFLMVLSADGDIVYLSEN
VSKCLGLPQIDLTGHSVFEFTHPCDHEELREMLARRTGQSKKAKEQHTNRSFLLRMKCTL
TSRGRTVNVKSASWKVLRCSGHIHTTDGIKKGGCEEKNVCSTYLVLICESIPHPANIEAP
LDSRTFLSRHTLDMRFTYCDERITDLLGFEPVDLLQHSVYEYYHALDSDHMTKTHHNLFV
KGQVCTGQYRLLAKAGGFAWAETQATVIYNSKNSQPQCVVCVNYILSGIEQPKQILSLQQ
TNSTKIKKEQEEHHSESLGTEVTTAELKDEAKAENEKKEECVREELHDSLKGEPEALTVA
DPVLTLDITNTDSALSVLTEIPLYNDVMLPSSSVLLPLSPLSPPCSSLNDDDASIAHLQP
DDFQFPQSSPPDSSRSQVDLPVDSELSDQLKPDHVERLFSMDIESKTPFNTQGVGLDLEM
LAPYIPMDDDFQLRTVSPVESMCSSLGSVLELTPSSSTQTAPALPGAHLDIVSCDTVSQN
TRTTKQDNSREIIQDSDISSKCQTNPKLLKRKLETIPLSEAIRLVVTDFPEKKVKKSDAS
SSEGIRHTTILLLPSDVASRLLSRSSEGGAVTMPLPQLTRYDCEVNAPVTGRQHLLQGEE
LLCALDLVI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgttggagtcgcgtttgaccatggattcagtcgcacctgggaaaaaaagagtgagttca
gagcgaaggaaggagaaatccagagatgcggcacgttgtcggagaggaaaagagtcagag
gtgttttatgaactggccagagaactgcccctcccccacagcgtcacctctaacctggat
aaagcatcagtcatgagactcgcacttagttacctgcgcctgcgtaaactactgaacaca
gatgtaccgaatgtggaatctgaattagattctcagtggaacagttcatatctgaaagca
ctggacgggtttctcatggtcctttctgcagatggcgacattgtctacctgtcagagaat
gtcagcaagtgtctgggccttcctcagatcgaccttactggacacagtgtgtttgagttt
actcatccatgtgaccatgaggagctcagagaaatgctggcacgcaggactggtcagtct
aagaaagcgaaggagcagcacacaaacaggagttttctattgaggatgaaatgtacacta
accagcagagggcgcactgtcaatgtcaaatctgcctcctggaaggtgctgcgctgttcg
ggccatatccacacaacagatggcatcaagaagggtgggtgtgaggaaaaaaatgtgtgt
tcaacgtacctggtgctcatctgtgagtctattccccacccggcgaacattgaggctcct
ctggattctagaacatttctcagccgccacactttagatatgcgcttcacctactgcgac
gagaggatcacagatctgttgggttttgagccagtggatctgttgcaacattctgtgtat
gaatactatcacgcactggattctgaccacatgaccaaaacacaccacaacctgtttgtg
aagggacaagtgtgtactggacagtaccggctgctggctaaggcaggagggtttgcttgg
gcagagactcaagccactgtgatctataacagtaaaaactcccagccacagtgtgtggtc
tgcgttaactacatcctcagtggcattgagcagcccaaacaaatcctgtcccttcagcaa
accaacagcacaaaaattaaaaaggaacaggaagaacaccactcggagtcactcggaact
gaagtgactacagcagagctgaaagacgaggccaaggcagagaatgagaagaaagaagag
tgtgtgagagaggagctacatgacagcctgaagggggagccagaggcactgactgtagca
gaccctgtcctcactctggatatcaccaacacagactccgcactctctgtgttgacagaa
attcctctctacaatgatgttatgttgccctcttcaagtgttctgctacctctctcaccc
ctctctcctccctgttcatccctaaatgatgatgatgcctccatagcccatctacaacct
gacgacttccaattcccacaatcttcgcctcctgattcttccagatcccaggtcgatctc
cctgtggattcagaattaagtgaccagctaaaaccggatcacgtggaaagactattttcc
atggatatagagtccaaaaccccctttaatacacagggagtgggtttggatctggagatg
ttagctccatacattcccatggatgatgatttccagctgcggactgtttctccagtcgag
tcgatgtgttccagcctgggttcagtgcttgaactgaccccctccagcagcacacaaact
gcccctgctctcccaggagcccatctagacatagtgtcctgtgacactgtttcacagaac
actagaaccacaaagcaggataacagcagggaaattattcaagacagtgatatttcttct
aaatgtcagaccaacccaaagctactcaagagaaaactggagaccatacctctgtctgaa
gcaataaggctggtggtgactgattttccagagaagaaggtaaaaaaatcagacgcttca
tcatcagaagggattcgtcataccacaatactgttgctgccatctgatgttgcgagtagg
ttattgagcagatcatcagagggtggagccgtaacgatgcccctcccccagcttacccgt
tatgactgtgaggtaaatgcacctgtgactgggcggcagcacctgctacagggggaggag
ctactgtgtgccttggacctagttatttaa
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