Onychostoma macrolepis: 131552354
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Entry
131552354 CDS
T09350
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
omc
Onychostoma macrolepis
Pathway
omc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
131552354 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omc01002
]
131552354 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omc00536
]
131552354 (shhb)
Peptidases and inhibitors [BR:
omc01002
]
Cysteine peptidases
Family C46: hedgehog family
131552354 (shhb)
Glycosaminoglycan binding proteins [BR:
omc00536
]
Heparan sulfate / Heparin
Morphogens
131552354 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Hom_end_hint
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
131552354
NCBI-ProteinID:
XP_058652047
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Position
02:complement(19439008..19447855)
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AA seq
416 aa
AA seq
DB search
MDVRLHLKQIAFLCFISLLLTPCGLACGPGRGYGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSGTVTLADGRRKHIKDLKVGDRVLAADEEGNVLLSD
FMMFMDHDPTTRRQFIVIETSEPFTKLTLTAAHLVFVGNASASSGTTATFASNVKPGDTV
LVSEGTGKSLKSVKVKRIYTEEHEGSYAPVTAHGTIIVDRVLASCYAVIESHKWAHWAFA
PVRLSHKLMTWLFPARDSNVTFQEDGIHWYSNMLFHIGSWLLDRDSFHPLGISHLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaggctgcatctgaagcaaattgcttttctgtgttttatcagcctgcttctg
acgccttgtggattagcctgtggtcccggtagaggttatggaaaacgaagacacccaaag
aaattaaccccgttggcttacaagcaattcattcccaacgttgccgagaaaacgctcggg
gccagcggcaaatacgaaggcaaaatcacaaggaactcagagagatttaaagagctgatt
ccgaattataatcccgatatcatctttaaagacgaggaaaacacaaacgctgacagactg
atgaccaagcggtgtaaggacaagttaaattcgttggcgatatccgtcatgaaccagtgg
ccaggtgtgaaactgcgcgtcactgaaggctgggatgaggatggtcaccatttcgaagaa
tctttgcactacgagggacgagcggtggacataactacctcggacagggataaaagcaag
tatgggatgctatctagacttgcagtggaggcaggattcgactgggtctattacgaatcc
aaagcccatatacactgctctgtcaaagcagaaaattcagtggctgctaaatcaggggga
tgctttcctggatctggcacggtgacactcgcagacgggaggaggaaacacatcaaagat
cttaaagtgggcgaccgggttttagcagcggacgaggagggaaacgtcttattaagcgac
ttcatgatgttcatggaccacgatccgacaacgagaaggcaattcatcgtcatcgagacg
tcagagccttttacaaagctcaccctcacagccgcgcacctcgtcttcgttggaaacgcc
tcagctagttctgggacaacagcaacatttgccagcaacgtgaagcctggagatactgtt
ttagtgtcggaaggtacaggcaagagcctcaagagcgttaaagtgaagaggatttacact
gaagagcacgagggctcttacgcgccagtcaccgctcacggaaccataatagtggatcgg
gtgctggcttcgtgttacgcggttatcgagagccacaaatgggcgcactgggcttttgca
ccggtcaggttaagtcacaagctgatgacgtggcttttcccggctcgtgattcaaacgtc
acttttcaggaggacggcatccactggtactcaaatatgctgtttcacatcggctcttgg
cttctggacagagactctttccatccactcgggatttcacacttaagttga
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