Onychostoma macrolepis: 131552754
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Entry
131552754 CDS
T09350
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
omc
Onychostoma macrolepis
Pathway
omc04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
131552754 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omc04040
]
131552754 (kcnma1a)
Ion channels [BR:
omc04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
131552754 (kcnma1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
TagF_N
BNR_3
Motif
Other DBs
NCBI-GeneID:
131552754
NCBI-ProteinID:
XP_058652784
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Position
13:9422807..9678587
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AA seq
1297 aa
AA seq
DB search
MLAVADGNGSYGSSSRMSNNINLNKNPDSSVSISKMDLIIPFSPDVPCDNNGQRMWWAFL
ASSMVTFFGGLFIILLWRTLNYLWTVCCHCNIKSKEAQKVNNPVNSQADGPSKILNDKDD
APISEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQNFY
KDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLG
LRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWEN
FQNSQPLSYWECVYLLMVTMSTVGYGDVYARTTLGRLFMVFFILGGLAMFASYVPEIIEL
IGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNL
ELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVI
SIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGLST
MLANLFSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLL
IAVEYKSEQRESSILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKRI
KKCGCKRTKMSVYKRMKLACCFDCGRSERDCSCMSGSVHSNMDSLQRAFPLSSVSVHDCS
TSLRASKYKFNGYVRSLEDEHPSTLSPKKKQRNGGMRNSPNCSPKMTRHDPLLVPGNEQI
ENMDANVKRYDSTGMFHWCPSKDIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRN
LVMPLRASNFHYHELKPIVFVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINL
CDMCVILSANQNNIDDASLQDKECILATLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSP
DNSPVHGLVRQASITTGSNIPIITELAKPGKLLPLVSFSQEKNSGTNIQMITELVNDSNV
QFLDQDDDDDPDTELYLTQPFACGTAFAISVLDSLMSATYFNDNILTLIRTLVTGGATPE
LEALLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYN
MLCFGIYRLRDAHLSTTSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSH
SSHSSHSSSKKSSSVHSIPATNRQNRSSKAREARDKQNATRMNRMGPEKRWFTDEAENAY
PRNIQIKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgtggcagatggcaacggatcctatggcagcagctctagaatgagtaacaat
atcaatctgaataaaaacccggactcttctgtctctatatcgaagatggacctgatcatc
cctttctcaccagacgtaccctgtgacaacaatggtcagcgcatgtggtgggctttcctc
gcctcatccatggtgacgttcttcgggggtctcttcatcatcctcctgtggaggaccctt
aactacctgtggacggtctgctgccattgcaacatcaaaagcaaggaggcacagaaggtg
aataaccctgtgaacagtcaggctgatggcccatcgaagatcctgaatgataaagatgat
gccccaatcagcgaggtgggctggatgacctcagtcaaagactgggcgggggtcatgatc
tcagcacagacccttaccggcagagttctggtggtgttggtctttgcactcagcatcgga
gctctgggaatatacttcatagattcttcggatcctatagaatcctgtcagaatttctac
aaagacttcacgttacaaattgacatggcattcaacgtgttcttcttactctactttggc
ctgcgtttcatagcagccaatgataagctgtggttctggctggaggtgaactcagtggtg
gacttcttcacagtaccgcccgtgtttgtgtcagtgtatctgaacaggagctggctgggt
ctgaggtttctaagagccttgagattgatacagttctcagaaattttacagtttttgaat
atcttaaaaacaagtaattccatcaagctggtgaacctgtgttccatcttcataagcaca
tggctcactgctgcaggattcattcatctggtggaaaactcaggggatccatgggaaaac
ttccaaaactctcaaccgctctcatattgggaatgtgtgtacttattaatggtcactatg
tccacggtgggatatggagacgtctatgcaagaaccactcttggacgccttttcatggtc
ttcttcattctcggtggtctggccatgtttgccagctacgtccctgaaatcatagagtta
ataggaaaccgcaagaaatatggtggttcctatagtgcggtaaatggcagaaagcacatt
gtggtctgtggtcatatcacgctcgaaagtgtttccaacttccttaaagacttcctacac
aaggacagggatgatgtcaatgtagaaattgtttttcttcataatatttcccctaatctt
gagctggaagccttgttcaaacgtcacttcactcaggtggagttctatcaaggatcggtc
ctcaacccgcatgatctagcaagagtaaagatcgagtcagcagacgcctgcttgattctt
gcaaacaaatactgtgcagacccggatgctgaagatgcctctaatatcatgagagtaata
tcgatcaagaactaccatccaaagatcagaataatcactcaaatgttgcagtaccacaac
aaggcccatctgctaaacattcccagctggaactggaaggagggtgatgatgcgatctgc
ctggccgagctgaaggcaggcttcatagcccagagctgcctggcacagggcctgtccacc
atgctcgccaacctcttctccatgaggtcatatatcaagattgaggaggacacatggcag
aagtattatctggagggagtggccaatgaaatgtacactgagtacctgtccagtgccttt
gtggggctttcatttcctacagtttgtgagttgtgctatgtgaaactcaagttgttgttg
atcgctgttgagtacaagtccgagcagagggaaagcagtattctgatcaacccgggaaat
cacgttaagatgcaggaggggacactgggattctttatcgccagtgatgccaaagaggtg
aaaagagcatttttctactgcaaagcatgtcatgatgacatcacagatcccaaaaggatt
aaaaagtgtggctgcaagagaaccaagatgtccgtctacaagcgaatgaaactggcatgt
tgttttgattgcgggcgttctgagcgcgactgctcgtgcatgtcaggcagtgtacatagt
aacatggacagtcttcagagggccttcccactttcttctgtctctgttcatgattgctca
accagtttacgtgcctccaaatataagtttaacggatatgtcagatcactcgaagatgag
catccgtcaacactgtcacccaaaaagaagcaacgcaacggaggcatgcgaaattcaccc
aactgctcacccaaaatgacgagacacgaccctctactcgttccgggaaatgagcagatt
gagaacatggatgctaatgtcaaaagatacgactctactggaatgtttcactggtgtccg
tccaaagatattgagaaggtcatcctgacacgcagcgaggcctccatgacggttttaagt
ggacatgtagtagtctgtatatttggagatgtcacgtcagctttagtggggcttcgaaac
ttggtgatgcctttgagagcaagcaacttccattaccacgagctaaagcccatcgtgttt
gtgggctcattagattatctgagaagagagtgggaaacccttcacaacttccctaaagtc
tccatcttacctggtacgccattaagtcgagctgatttaagggccgtcaacatcaacctc
tgtgacatgtgcgttatcctgtcagccaatcagaacaatatcgacgatgcttcactgcag
gacaaggaatgcatcttggcgactcttaacatcaaatctatgcagtttgatgacagcatt
ggggtcttgcaggctaattcccaaggtttcacacctccagggatggataggtcatctcca
gataacagtccagtgcacggcttagttcggcaggcatccatcaccacgggatcaaacatc
ccgatcataactgaactcgctaagcctggcaaactactgcctttggtttcattcagtcag
gaaaaaaacagtggaaccaacatacaaatgataacagaactggtgaatgactccaacgtt
cagtttttggaccaagatgacgatgacgacccagatacggagctgtatctgacccagccg
tttgcctgcggtaccgcgtttgccatcagcgtattggactccctgatgagtgcgacatac
ttcaatgataatatcctcaccctgatccggacgctggtcacgggaggcgccactccggag
ctggaggccctgctggctgaggagaacgcactgagaggtggctacagcacgccgcagacg
ctggctaacagggacaggtgtcgggtcgcccagctggccctctacgatgggcccttcgca
gacttgggggatggtggttgctacggagacttattttgtaaagcattaaaaacgtacaac
atgctgtgctttggaatctatagattgcgagatgcacatttaagtacaacaagccagtgc
acaaaaagatatgtcatcacaaacccgccttatgagtttgagctggtgcccacggacctg
atcttctgtctgatgcagtttgaccacaacgcgggccagtcccgagcgagcctgtcccac
tcctcccattcctctcattcatccagcaagaagagctcgtctgttcactccatccccgcc
acgaaccggcagaaccgcagcagcaaagcacgggaagcccgtgacaaacagaatgcaaca
aggatgaatagaatgggcccagaaaagagatggtttacagatgaagcagaaaacgcatac
ccaaggaacattcaaatcaagcccatgagcactcacatggccaaccaagtcaatcagtac
aaatccactagcagtctgattccacctatccgagaagtcgaagatgaatgctga
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