Onychostoma macrolepis: 131552984
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Entry
131552984 CDS
T09350
Symbol
pcdh1b
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
omc
Onychostoma macrolepis
Pathway
omc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
131552984 (pcdh1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omc01009
]
131552984 (pcdh1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omc04515
]
131552984 (pcdh1b)
Protein phosphatases and associated proteins [BR:
omc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131552984 (pcdh1b)
Cell adhesion molecules [BR:
omc04515
]
Cadherins
Protocadherins
131552984 (pcdh1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_4
Cadherin_CELSR2_9th
DUF7171
PepSY
Motif
Other DBs
NCBI-GeneID:
131552984
NCBI-ProteinID:
XP_058653228
LinkDB
All DBs
Position
14:11504692..11762742
Genome browser
AA seq
1235 aa
AA seq
DB search
MRSLGGIPFGSVARLQKRNSNRLMMCQSANAMWSRWSAMLVWMFLLFCCSANVVSTIIYQ
VTEEQPPNTLIGSLASDQGLPDTGHLYKLEVGAPYLRVDGKTGDIYTTETPIDRETLKDC
RNLFEGDPCFLEFEVSITDLMKGTGPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHV
GALFAIPVATDKDSGSNGIADYALTTGPEAANLFSLQVAQDSDEKLPQLIVLGNLDREQR
DSYDLNIKVVDGGSLPRQSSALLRITITDANDNVPKFEKSHYEGELPENSPVGHSVLQVK
ANDSDMGPNGEVTYSLHQASPIVQRLLSIDRNTGIIFVKGLVDREDISMLKFYVQAKDNG
PQSKSSKALVTITVKDQNDNAPLIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRD
EGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTMLLDYERIKDYRIEIVAVDSGN
PALSSTNSLKVQVTDMNDNSPVFSPTLYEVEFAEENQPGDKVLDVVATDADSGTNAELTY
SITSGSVPEGLFEINPNTGEVRVMSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVL
DRNDNDPKFMLSGYSFSVQENMPPLSPVGMVTVNDRDEGDNAHVQLSVEPDNGKFMIQNG
TYTILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPSNSSY
KFLDPRTSPETHVERVEAEDMDIGLNSEMEFSIVGGNPHGLFRISSEGEITLAKEFTSKH
IGLHRLVVKVNDKGTPPRHTTALVHIYVNETIGNVSHVEGLVGHSLYTPLEMDIAGDPDY
SRDGPSNIIFAVLGGFCVVVLIIAVAMIIRHVVLKENKSGYQAGKKETKDLYAPKPGPKS
NKNKKAKKSKAPKPANPSEEDEGGSLQKGLKFNLMNDSVNDSPRIHLPLNYPPGSPDLGR
HYRSNSPLPSIQLQPQSPSASKKHQAVQDLPATNTFVGTGDNNSTGSDQYSDYSYKANSS
KYSTKQLPHRRVTFSTANQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPED
HYERTTPDGSIGEMEHPENDLRPLPDVAMTGKCTRECTEYGHSDSCWMPGQPSPNRTKSA
KSGPKLSTFVPYQEREGQERLMADSSSKPHGEERSGGGSNKVASIRFLPPYTSAYSAGGD
SGKDCPREEIPLSQTADYAPATTPSSQGSKREIYL
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtttaggaggtatcccttttggcagtgttgccagattacagaagagaaacagc
aacagactgatgatgtgccagagtgccaatgcgatgtggtcacggtggagtgccatgcta
gtgtggatgttccttctcttctgttgctctgcaaatgtagtcagcaccatcatctaccag
gtgaccgaggagcagccgcctaacacactgattggcagcttggcatctgatcagggcctg
ccagacaccggtcacctttataagctcgaggtgggcgctccttacctccgtgtcgatggc
aaaaccggggatatctacaccacggagaccccaatcgatcgtgagactctcaaggactgt
cgcaaccttttcgagggtgatccttgtttcctagaatttgaggtatctattacagacctg
atgaaaggcacaggaccgcggctcatcgaaggccgcatcgagatcttggatgagaacgac
aacactccacagttctcttcacccgtcttgacattgtcgatcccagagaacacacacgtg
ggtgcgcttttcgcaatacctgtggccaccgacaaggattcaggaagcaatggcatcgcc
gattacgcgctaacgaccggccctgaagctgccaaccttttcagcctgcaggtggcgcaa
gactcagatgagaaattgccacaactcattgtattgggtaacctggatagagagcagcga
gattcatatgacctcaacataaaagtggttgatggtggctctctaccccgccagagtagt
gccctactcaggatcaccattacagatgccaatgacaacgtgcccaaatttgagaagtca
cactacgagggtgagctcccagaaaacagcccagtgggtcattctgttctacaagtgaag
gccaatgactctgacatgggacccaatggagaggtgacctacagcctccaccaggcatca
ccaattgtccagaggctccttagcattgaccgcaacacaggcatcattttcgtcaaaggc
ttggtagatcgtgaagatatcagcatgctcaagttctacgtccaagctaaagacaatggt
ccacaatcgaagagctccaaagcccttgtgactattacagtgaaggaccagaatgacaat
gcacccttaatcagaatccggggcattggccttgtgacgcatgaagatggtgttgctaac
atatcggaggacatgcctgtaggcacagctgtggctctggtggaagtatcagatcgtgat
gaaggtgaaaatgcagttgtgacctgtgtggtcgcaggggatgtcccattccagctgcgt
tcagctagtgaaacaggcaacgaccgcaagaggaaatacttcctccagacaaccatgctg
ctggactacgagcggatcaaagactacaggattgaaattgtagcagtggactctggcaac
cctgcactatccagcacaaattccctgaaggtgcaagtgacagacatgaatgacaactcc
ccggtcttctcgcccactttgtacgaggtagaatttgctgaggagaaccagccaggtgac
aaggttctggatgtggtagctacggatgccgacagtgggactaatgcagagctgacatac
agtataactagtggatcagtccccgaggggctatttgaaattaaccctaacacaggagaa
gtgcgtgtcatgagccagttggaccgtgaacaattagatcactatcaatttctagttgca
gcagctgataaaggtgtaccaagcttgagaggaactgccactgttgttgttaaggtgctc
gacaggaacgacaatgaccctaaatttatgctcagtggttacagcttttcagtccaagaa
aacatgccaccccttagtcctgttggaatggtaacagtcaatgaccgcgatgagggtgac
aatgctcatgttcaactctctgtagaaccagacaatggcaagtttatgattcaaaatgga
acgtacaccatactttcaactatttccttcgacagagaaaaggagagcacctacagtttc
cgacttaaagctgttgacggaggtgatccaccacgatcctcctatgttggcattaccatt
aatgttcttgatgagaatgacaatgctccatatgtcaccaagccctcaaactcttcatac
aagtttttggatccacgcaccagcccagaaacccacgtagaacgtgttgaggcagaggac
atggacattggtttaaattcggagatggagttcagtattgtagggggcaacccgcatggc
ttgttccgcatctcttcagaaggtgagattacgttggctaaagagttcacatccaaacac
attggtctccaccgtctggtcgtaaaagttaatgacaaaggcacgccaccacgccataca
accgcactggtgcacatttatgtcaatgagaccatcggcaatgtctctcacgttgaagga
cttgttggacacagtctttatacaccacttgaaatggacattgcaggtgatcccgattat
tctcgagatgggccaagtaacattattttcgcagtcttgggtggcttttgtgtggttgtt
ctaatcattgcagtggctatgatcatcaggcatgtcgtgctgaaggagaataaaagtggc
taccaggcaggcaagaaggagaccaaagacctctatgcccccaaaccaggacctaagagc
aacaagaacaagaaggcaaagaaaagcaaagctccaaagcctgccaacccatctgaggag
gatgagggggggagtctccagaaaggcctaaagttcaacctcatgaatgatagcgtcaac
gatagccctaggattcacctgccgctcaactacccccctgggagcccagacctggggcga
cactatcggtctaattctcctctgccatccattcagctccaacctcagtcaccttctgcc
tcaaagaaacaccaggcagtgcaggacctgccggccaccaacacctttgtaggaaccggg
gacaacaactcaacaggctcagaccagtattcggattacagctacaaggccaactcttca
aaatatagcaccaaacagctcccacatcgccgagtgaccttctccacagccaatcaggca
caagatctgcaggatccctctcagcacagttactatgacagcggtctggaagagtcagag
acacccagcagtaagagttcttcagggccccgtatcgggccccttgccctacctgaagac
cactacgaacgcactaccccggatggcagcatcggagagatggaacaccccgagaacgat
ctgaggcctctacctgatgtggccatgacgggaaaatgcacacgcgagtgtacagaatac
ggccactcagattcctgctggatgcctggacaaccctcacccaaccgcaccaagagtgcc
aagagcgggcccaagctctccaccttcgtgccttaccaggagagggagggtcaggagcgc
ctgatggctgacagcagctctaagcctcacggagaggagcggagcggaggcgggagcaac
aaagtggccagcattcgctttttgcctccctacactagtgcctattctgcaggcggcgac
tccggtaaggactgccccagggaggagatccccctgagtcagacagccgattacgcccct
gccactacaccctccagccaaggctccaaaagagaaatctacctgtga
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