Onychostoma macrolepis: 131553086
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Entry
131553086 CDS
T09350
Symbol
nfkb1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
omc
Onychostoma macrolepis
Pathway
omc04010
MAPK signaling pathway
omc04210
Apoptosis
omc04218
Cellular senescence
omc04620
Toll-like receptor signaling pathway
omc04621
NOD-like receptor signaling pathway
omc04622
RIG-I-like receptor signaling pathway
omc04623
Cytosolic DNA-sensing pathway
omc04625
C-type lectin receptor signaling pathway
omc04920
Adipocytokine signaling pathway
omc05132
Salmonella infection
omc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
131553086 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
131553086 (nfkb1)
04218 Cellular senescence
131553086 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
131553086 (nfkb1)
04621 NOD-like receptor signaling pathway
131553086 (nfkb1)
04622 RIG-I-like receptor signaling pathway
131553086 (nfkb1)
04623 Cytosolic DNA-sensing pathway
131553086 (nfkb1)
04625 C-type lectin receptor signaling pathway
131553086 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
131553086 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
131553086 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
131553086 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omc03000
]
131553086 (nfkb1)
Transcription factors [BR:
omc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
131553086 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
131553086
NCBI-ProteinID:
XP_058653443
LinkDB
All DBs
Position
14:complement(18610480..18637921)
Genome browser
AA seq
934 aa
AA seq
DB search
MAGEDPYHAEYIGQIDPFRDETIWMTMDPTPFPAMHNNNVMRTVDGPYLRIVEQPKQRGF
RFRYGCEGPSHGGLPGASSEKNRKSYPQVKICNYQGAARVVVQLVTNTEQAHLHAHSLVG
KQCDKGICIADLLPKDSSISFPNLGILHVTKKNVSKVLEERMIEAYRLGYNYGIFIHPEI
DALQGEVRMPRELTDAERNLISSASIHQSKEMDLSVVRLMFTALLPDSDGGFSRRLDPVI
SDPIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDESGLTWE
AYGDFSPTDVHRQFAIVFKTPKYRDQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQIID
KEEVQRKRQKTLPNFQDYSGAGGGAGGMFRGGGVGXTAGGGPSGGGGGHFFQGYSTYNNY
GSGYNFSSGMGGGGTAIKHTYQEPVEDSDEDSDSDNDDDPAAGGAVRICAQPETVGLGVA
SEDTDPTEDLELNSTGCVLEPHLAEFAGRQAQALFHYAVSGDARMLLAPQRPLMTTQDEN
GDTGLHLGVIHSQTDAVRNLAQVISALPGEDLLNIRNDLYQTPLHLAVLTQQKEAVEALL
EAEVDFTLTDRHGNTALHLAAQQKEDSVLRLLLKHKSMAQLTSIPNTAGVCPLHLAVQTN
SLSCVRALLDGGADVELQELSCGRTALHLATELGNLSLAGCLLLEGNAYVDSVTYNGSTP
LHIAAGRDSTKLCALLMAAGADPHKENFEPLFFKDDELCGTCEEEEEDEGYIPGTTPLNM
ATSPEVYDILNGEEYQPATIVVPPQGDMKSLSSDTKQELCQALEEQTGGWESLALALGLG
ILTSAFRLSSCPAGKLLDSYEVSGGTVRELVEGLKHVGNSSAVSLLQAVCKEPEAVHTTT
QLTGPGLCKSIQGLTLGHHQEESGICDSGVETSF
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaggatccataccatgcagagtatataggacaaattgacccatttagagac
gagacgatatggatgaccatggacccgacaccgtttccggccatgcacaacaataatgtt
atgaggacagtcgacggaccttatctacgaatcgtcgaacaaccaaaacagaggggcttc
aggttccgctatggatgtgaaggcccctcccacggaggactcccaggggcctccagtgag
aagaacaggaagtcttacccacaagtgaagatctgtaactaccagggtgcagcgcgagtg
gtagttcagctggtgaccaacactgagcaagcccatcttcatgctcacagcctggtgggc
aagcagtgtgataaaggaatctgcattgccgacttgctgcccaaagattcaagcatcagt
tttcctaacttgggcattttacatgtgacaaagaagaacgtaagcaaagttttggaagag
aggatgatagaggcctacaggttggggtataactacggtatatttatccatcctgagata
gatgccctacaaggagaggtccgcatgcccagagaactcacagatgctgagaggaacctg
attagcagtgcatctattcatcagtcgaaggagatggatctgagcgtggtacggctcatg
ttcacagccttgctgcctgacagtgatggagggttctcccgccgactggatccggtcatt
tcggaccccatctttgacagcaaggccccaaatgcctccaatctgaaaatagtgcggatg
gatcggactgctggctgtgtgacaggaggagaggaggtctatctgctgtgtgacaaagtc
cagaaagatgatatccaggtgcggttttatgaagatgatgagtcaggtctgacctgggag
gcctacggggatttctcccccactgacgtccacagacagtttgccatcgtcttcaagacg
cctaaatatcgggaccagaacctccagaagcccatctctgtgtttgtgcagctgaaaaga
aagtcagacaatgaaacaagcgaacccaagcctttcacctaccatccacagattatagac
aaagaagaagtccagagaaagagacagaagactctgccaaacttccaggactacagtgga
gcaggaggcggagctgggggcatgtttagaggaggaggggtgggtncaacagcagggggt
ggtcccagcggaggaggaggaggacatttcttccagggatattcaacctataacaattac
gggtctggatacaacttctcctcaggcatgggaggaggcgggaccgccatcaagcatacg
tatcaagaaccagtggaagacagtgatgaggacagtgacagtgataacgatgatgatccg
gcagcaggtggtgcggtgcgaatctgtgcccaaccggaaactgttggtttgggagtggca
agtgaggacacagatcctacagaagatctagagttaaactccacaggctgcgtgttagag
cctcatttggctgagtttgctggaagacaggctcaagctctgtttcattacgcagtaagc
ggtgatgctagaatgcttctggctccacagcgccccctcatgaccactcaagacgagaac
ggagacacgggtttacatctgggagtgatccatagtcagacagatgccgtgcgaaatcta
gcacaagtcatctcggctctccccggagaggatttacttaacattaggaatgatctttac
cagactcctttgcacctagcagtgttgacgcagcaaaaagaggcagtcgaggccttgttg
gaggccgaggtggacttcacgctcacagatcgccatggaaacacggcacttcacctggcg
gctcagcagaaagaggatagcgtgctgcgattgctgctgaagcacaaatcaatggcacaa
ttaaccagcatccccaacacagcaggtgtctgtccgcttcacctggctgtacagacaaac
agtttgagctgtgtgcgggccctgctggatggaggggcagatgtggagctccaggagctc
tcatgtggccgcacagcacttcatctggccacagaactgggaaacctttccctcgccggc
tgcctgttgctggagggtaacgcatatgtagacagtgtcacctataacggttcaactcct
ctgcacattgctgcaggacgggactcaaccaaactgtgcgcgctcctgatggctgcagga
gcagatcctcataaagaaaattttgaaccactgttcttcaaagatgatgagttgtgtggt
acatgtgaagaagaagaggaagacgaaggctatattcctgggacaactcctctgaacatg
gcaacctccccagaggtttatgatattcttaatggagaagagtaccaacccgccaccatt
gtcgttccaccacaaggtgacatgaagagcttgagctctgacacaaagcaggagttgtgc
caagcactggaagaacagacgggaggctgggagagtctggctcttgctctggggcttggc
atcctgaccagtgccttcagactcagctcctgccctgctggaaagctgctggacagctat
gaggtgtctggaggaacggtgcgtgagctggtggagggactgaagcatgttgggaacagc
agtgctgtcagtttactccaggccgtgtgtaaggagcctgaagctgtccacaccacaact
cagctcacaggtccaggactctgtaagtccattcagggtttgacactgggccatcatcag
gaggagagtggcatatgcgacagcggggtggagacctctttctag
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