Onychostoma macrolepis: 131553358
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Entry
131553358 CDS
T09350
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03020
RNA polymerase
omc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131553358 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
131553358 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131553358 (polr2b)
03400 DNA repair and recombination proteins [BR:
omc03400
]
131553358 (polr2b)
Enzymes [BR:
omc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131553358 (polr2b)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
131553358 (polr2b)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
131553358 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
131553358
NCBI-ProteinID:
XP_058653951
LinkDB
All DBs
Position
14:complement(18985835..18996095)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKDGEEQQQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLKERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatcaagacgaagatatccagtatgatgaagatgatgatgaaatcacccctgat
ctgtggcaggaggcctgttggattgttatcagctcatactttgatgaaaaaggtttggtg
cgacagcagctggactcattcgatgagttcatccagatgtctgtgcagaggattgtggag
gatgctccacccattgacttgcaggctgaggcccagcacacatctggagaggtggaggaa
ccgcctcggtacctcctgaagtttgagcaaatctacctgtccaaacccactcactgggaa
agagatggcgctccatcacctatgatgccaaacgaagccagactccgaaatctcacgtat
tctgcccctctgtatgtggatatcacaaagaccatcataaaagatggggaagagcaacag
cagacacagcatcagaaaaccttcatcggcaaaattcccatcatgctccgttccacgtac
tgtctcctgagcggcctgacagatcgtgatctttgtgagttgaatgagtgcccactggac
cctggaggctacttcatcatcaatggttcagagaaggtcctgattgctcaagagaagatg
gccactaacacagtgtatgtgtttgccaagaaagactccaagtatgcttacacaggagag
tgcaggtcatgtctggagaactcctccagacccaccagcaccatctgggtcagcatgatg
gcccgtggaggacagggagtaaagaaaagtgccatcggccagaggattgtgtccactttg
ccgtatatccggcaggaagtacccatcatcattgtattccgtgctttgggatttgtgtct
gatagagacattctggaacacatcatctatgactttgatgatcctgagatgatggaaatg
gtgaagccatctttggatgaggcctttgtgattcaagaacagaatgtggctctgaacttc
attggctccagaggggccaaacctggtgtaaccaaagagagaagaatcaaatatgctaaa
gaggttttgcagaaggaggtgctgccacatgttggtgtatcagatttctgcgagaccaag
aaagcatattttcttggttacatggttcacagactattattggccgctctgggcagacga
gaactggatgacagagatcattatggcaacaagaggcttgatcttgctggacccctgctt
gcattcctcttcagaggaatgttcaagaatttgctgaaggagatcaggatctacgcacag
aagtttattgacagggggaaagactttaatctcgagctggccattaagactcgcatcatt
tctgacggactcaagtactctctggccacgggaaactggggggatgtaaagaaagcacat
caggccagagctggagtatcgcaggtgttgaacaggttgaccttcgcttccactctttcc
cacctgcgccgtgtaaactcgcctataggacgagatggcaagctggccaaacccaggcag
cttcataacacactgtggggtatggtgtgccctgctgagaccccagagggccatgctgta
ggtttggtgaagaatctagcgctcatggcctacatttctgtgggatctcagccgtccccc
atcctggagttcttggaagagtggagcatggagaacctggaggaaatctcacctgctgcc
attgcagatgcaactaagatttttgtgaatggttgctgggtgggtattcataaagatcca
gagcagctgatgaacacactgcggaaactgaggagacagatggacatcattgtgtctgag
gtgtcaatgatcagagatattcgtgagagggagatcaggatctacacagacgctggcagg
atctgccgtccgctgcttattgtagaaaaacagaaacttcttctgaagagacggcatatt
gaccagctcaaagaaagagagtacaacaactacagttggcaggacctagtagccagtggt
gtggttgaatatattgacacactagaggaggagactgtgatgttggccatgaccccagat
gaccttcaggagaagggagtggcttattgctccacctacacacattgtgagatccacccg
tccatgattttgggcgtctgtgcatctatcattcccttccctgatcacaaccagtctccc
agaaacacgtaccagtctgctatgggtaaacaagccatgggagtttacatcaccaacttc
catgtgcgtatggataccctggcgcatgtgctctactacccccagaaacccctagtcacg
actcgttccatggagtacctgcgctttagagagctgccagcaggtatcaattccattgtg
gctattgcatcatatactggatacaaccaggaagattctgtcatcatgaaccgttcagct
gtggatcgtggattcttcaggtctgtgttctaccgctcatacaaggaacaggaatctaag
aaaggctttgaccaggaagagatctttgagaagcccaccagagagacctgtcaaggcatg
cgacatgccatctatgataagttggatgatgatggtttgattgctcctggtgtacgtgtg
tctggcgaggatgttatcattggtaaaaccgtaacgcttcccgagaatgacgatgagctg
gatagcaccaaccgtcgctacactaagagagattgcagcacattcctgcgcaccagcgaa
actggaattgttgaccaagtcatggtcacactaaaccaggagggctacaagttctgcaaa
attagggtccgttcagttcgtataccacaaattggagataagtttgctagtcgtcacggt
cagaagggtacctgcggtatccagtatagacaagaggacatgccgttcacatgtgaagga
atcactccagatatcatcatcaaccctcacgccatcccctccagaatgacagtcggccat
ttgatcgagtgcctgcaggggaaggtgtctgctaacaaaggggagattggtgatgccaca
ccattcaatgatgctgtgaacgtacaaaaagtctccaacctgctgtcagaatacggttac
catctgagaggcaatgaggttctgtataatggcttcaccggccgtaagctcacctctcag
atctttatcggacccacatactaccagcgtctgaagcacatggtggatgataagatccac
tccagagcccgtggtccggtccagatcctcaacagacagcccatggagggtagatcacgt
gatggtggattgcgttttggagagatggaacgtgactgtcagatcgctcacggtgccgca
cagttcttaaaagagaggctttttgaggcctctgacccgtaccaggtccacgtctgcaat
ctatgtggcctcatggccatcgcaaacacgcgcacgcacacttatgagtgcaggggctgc
cgcaacaagacacagatctctttggtgaggatgccgtatgcctgtaagcttttattccaa
gagctgatgtctatgagcattgccccacggatgatgaccagctaa
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integrated database retrieval system
