Onychostoma macrolepis: 131553381
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Entry
131553381 CDS
T09350
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
omc
Onychostoma macrolepis
Pathway
omc04120
Ubiquitin mediated proteolysis
omc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131553381 (syvn1)
04120 Ubiquitin mediated proteolysis
131553381 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omc04121
]
131553381 (syvn1)
Enzymes [BR:
omc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131553381 (syvn1)
Ubiquitin system [BR:
omc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131553381 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-RING_Vps41
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
131553381
NCBI-ProteinID:
XP_058654000
LinkDB
All DBs
Position
14:complement(5157105..5162589)
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AA seq
619 aa
AA seq
DB search
MVRAALVTGTSLVLTGAVVAHAYFLKNQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAPAQAPAAAAPAANA
PVPPPVNVAPGMMPQFPPGLFPFWGPFPGAPPPAAPGAQAAPDAPQTSTAATQAQGAESG
ASSSTQPNADSASTAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSTLSTMSE
AELRELEQEGRQGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSENNTGETSTS
VNVESSSSTGNTETPSQENEAQSDGSGNGATGFSPPDSTTGVDKDRKEGDEDEDDGEPNA
AELRRRRLRKLETSNTPDH
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctcttgtgacaggcaccagtttggtgctgactggtgcagtggttgct
catgcttacttcctcaagaaccagttctacccaactgtggtgtacctcactaaaagcagc
cctagcatggcagttttatacattcaggctttcgttttggttttccttttggggaaatta
atgcggaaggtgttttttgggcaactgagagctgctgaaatggagcatctgattgaacgc
tcctggtatgcggtgacagagacctgtttagcctttacagtcttcagggatgatttctct
cctcgctttgtggcccttttcactttgctgctcttcctcaaatgctttcactggctggct
gaagacagggtggactttatggaaagaagtccaaatatctcatgggtcttccacttcaga
gttctctctttaatggtgttgctgggagtgttggactttctgtttgtcaatcatgcgtgt
cacagcattataacaagaggagcttcagtgcagctggtttttggatttgagtatgcaatt
ctgatgactatggtcctcaccaccttcatcaagtacaccttacacacagttgatctgcag
agtgagaatccgtgggacaataaggccgtctacatgctgtacacggagctctttacaggt
ttcatcaaggtgcttttgtatatggcgttcatgaccataatgataaaagtgcacaccttc
cctctgtttgccattcgacccatgtatctcgcaatgaggcaattcaagaaggcagtaaca
gacgccatcatgtctcgacgagccattcgtaatatgaatactctctatccagatgccacc
cctgaagacttgcaagccaccgacaatgtgtgcatcatttgcagagaagagatggtgact
ggagccaagaaactgccgtgcaatcacatctttcactcaagttgccttcgctcatggttc
caaagacagcagacgtgtccgacctgtcgtatggatgtcctccgagcgtcccagccaaac
cagactcctgccccagctcctgcacaagcacctgctgctgctgctcctgctgctaatgcc
cccgtacctccacctgtcaatgtcgctccaggtatgatgcctcagtttcctccgggtctg
tttcccttttggggtcccttcccaggcgcgcctcctcctgctgctccaggtgcacaggca
gctcctgacgctccacagaccagcaccgctgcaacacaggcacagggagcagaatcagga
gccagcagctcgacccagccgaatgcagacagtgcctctactgctcccggagcaatgcct
ggattccccttctccatgcctccacctttcccatcagctccatggctgccgatgcctcca
cctccacccttcatgtcatctatgccaccgcctccatcgactctgtccaccatgtcagag
gccgagctcagagaactggagcaggagggcaggcaaggattggaagccaggttgcagtgc
cttcacaacatccacacattgctggatgccgctatgctcaacattcaccactacctcagc
acggtggctacgttaagtcctccaagatcagaaaacaacactggtgagacgagtacatct
gtgaatgtggagtcctcttcctccacaggcaacacggaaactcccagtcaggagaacgag
gctcagagcgatggatctggaaatggagctacaggcttttctccaccagactcaaccaca
ggagtggacaaagacaggaaggagggagatgaagatgaggatgatggtgagccaaatgcc
gccgagttgagacgacgtcgcctgcgtaaactggagaccagtaacactcctgaccactga
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