Onychostoma macrolepis: 131553384
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Entry
131553384 CDS
T09350
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b isoform X1
KO
K16499
protocadherin delta 2
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omc04515
]
131553384 (pcdh18b)
Cell adhesion molecules [BR:
omc04515
]
Cadherins
Protocadherins
131553384 (pcdh18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Big_9
PepSY
Motif
Other DBs
NCBI-GeneID:
131553384
NCBI-ProteinID:
XP_058654003
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Position
14:13885200..13890956
Genome browser
AA seq
1161 aa
AA seq
DB search
MGTTKHSSDRNVLFCKTLLKLILLAGVVHNVSGKTLKYKVLEEQRVGTVITRLKEDVASI
LSKLPSSVSPRFRAMQRGSTPLLSVREEDGEISIATKIDREKLCEKNLNCTIEFDVITLP
TEYLQLFHIQVEVLDINDNAPQFSRAIIPIEISESASVGTRFPLDSALDPDVGENALHTY
SLTRNNFFKIDIRTRTDSAKYADLVVMRELDRETQSSYQLQLTASDSGVPPKSGSTLLKI
SISDSNDNSPAFDEQAYVVNLLENSPLGTLLVDLNATDPDEGNNGKIVYSFSSHVPPKIL
ETFKINPDNGHITLIKKVDYETTSSYEIDVQAQDMGPNSIPGHCKIIIKVVDVNDNKPKI
NINLMTQGKEEVAYISEASPVDTFIALVRVDDSDSGQNGEVVCRLHGHGHFRLQKTYENN
YMILTNVSLDREKRSEYSLTVIAEDRGSPSLSTIKHFTVQVQDENDNPPRFEKSRYEIFK
SENNSPGAYLTSVVATDPDLGSNGQVTYSIVESQVQGSSISTYVTIDPSNGAVYALRSFD
REEVGRLSFTVQARDGAGPASLSSNTTVLLTVLDENDNPPIIVAPQLINHTAEVPLWRHA
EPGHLVTIIKATDRDAGANSELTCSIVGGNDEGLFVIEPRRCELRTNGSMEVSGREGFDL
AILVQDRGASIRLSARAILHISLRDYPESYSLNPSDMNNQSALDVSMIIIISLGAICGVL
LIVMVMFATRCSREQKDPRHSYNCRVAESTYQNHPKKPARQIHKGDITLVPTVNGTLPVR
AHPHSPSASPAPESRQSHHSRQSLNSLVTISSNHVPENFALELAHATPPVEQVSQLLSIL
HQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDCEMGRESPLLGEGF
SELFTPDGHHRLHPTMKLCTEECRVLGHSDQCWMPPLPSPASSDYRSNLYIPGEDPQQKA
TPEAPQSGESTLRKKSFSTFGKESEEGEGEAADAEDLCGTTSLLSEMNSVFQRLLPSSLD
NYNETNETEKVTACATGVGSLERRKGHLPGKPSPATYQQNVAVWAANTHFQNPGHGHAPT
SHMTALVAPLPAPLPAPMAASASSSKWLPAMEEIPENHEEDELESVLGHLHGKRCDSRSE
IMDASELVAEINKLLQDVRQS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaactaaacactccagcgacaggaatgtactgttttgcaagacgcttctgaaa
cttatacttctggctggcgttgtgcacaatgtttcggggaagactttaaaatacaaagtt
ttggaagagcagagagttggcacggtgatcaccagattgaaagaggatgtagccagtatc
ttatccaaactcccgagctcagtgtccccacgcttccgcgcgatgcagagaggcagcacc
cctcttctctccgtgcgcgaggaggacggagagattagcatcgccaccaaaatcgaccgc
gagaagctctgcgagaaaaacttaaactgcactatcgagttcgacgtgatcacgctaccc
acggaatacctccagttgtttcacattcaagtggaagtgttggacatcaacgacaacgct
ccgcagttctcgcgcgccatcatccccatagagatatcagagagcgcgtctgtgggcaca
cgcttccctttggatagcgcgttggacccggatgtcggggaaaacgcgctacacacctac
tcgctcactcggaataactttttcaaaatcgatatcaggacgcgtacggatagcgcaaag
tacgcggacctggttgtgatgagggaacttgacagggaaacacagtccagctaccaacta
caactcacagcgtcagactctggcgtgccgccgaaatctggctcaactctgctcaaaatc
agcatatctgattccaacgataatagcccggcatttgacgagcaggcttacgtggtcaac
ctcctggaaaattcaccactggggacgctactggtggacctgaacgccacagacccggat
gaaggcaataatggtaaaatagtgtactctttcagcagccacgtgccacccaaaatccta
gagacctttaaaatcaacccagataatggccacatcactctgattaagaaagttgactat
gaaaccacttcttcgtatgaaatagatgtgcaagctcaggatatgggtcccaactccatt
ccaggccactgtaaaataatcatcaaagtggttgacgtcaacgacaacaagccaaaaatc
aacatcaaccttatgactcagggcaaagaggaggtggcctacatctcagaggcctcccct
gttgataccttcattgcattagtgcgcgtcgatgacagcgactcaggtcaaaatggtgag
gttgtgtgccgtctccatggccacgggcattttcgcttgcagaagacctatgagaacaac
tacatgattcttactaatgtgtctctggaccgtgagaaacgctctgaatatagcctgacg
gtaatcgctgaagaccgtggctcaccaagcctatccaccatcaaacacttcacggtgcag
gtgcaagatgaaaatgacaaccctccacgcttcgaaaagagccgatatgaaatcttcaag
tctgagaacaattcgcccggggcatacctaacatcagtggtggccaccgacccagatttg
ggctctaatggtcaggtgacctactcaattgtggagagccaggttcaaggtagctctatt
tcaacctatgtgaccattgacccatctaatggggctgtgtatgctctccgaagctttgat
cgggaagaggttggccggctttcgttcaccgtgcaggcacgggatggtgcaggcccagct
tctctgagcagcaacaccactgttttgctcactgtactagatgaaaatgacaacccacct
ataattgttgctccacaactaatcaaccacacagctgaggtgccactatggcggcacgcc
gagcctggtcatctggtgacaatcatcaaggcgacagatcgtgatgcaggggccaacagc
gagttgacttgctccatcgtcggtggtaatgacgagggactctttgtcattgaaccacgc
agatgtgagttacgaaccaacggaagcatggaggtttcggggcgtgagggatttgatctc
gcaatcctggtacaagacagaggggcatcgattcgtctttcagcaagggccattctgcac
attagcctgcgggactatccagaaagctactccctgaatccttcagacatgaacaaccaa
tcggctctagacgtgtctatgatcattatcatctcccttggtgccatctgtggtgtgctt
ctcatcgttatggtgatgttcgcaaccaggtgctcgagagagcagaaggacccaagacat
tcctataactgcagagtggctgagtctacctaccaaaaccatcccaaaaaacctgcccgg
cagatccacaagggcgatatcacactggttcccacggttaatggcaccctgcctgtgagg
gcccatcctcactccccttcggcctcacctgctccagagagccgccagagccaccacagc
cgccaatcactcaacagcctggtcaccatctcctccaatcacgtgccagagaacttcgcc
ctagaactcgctcatgccacaccacctgtcgagcaagtctcacagcttctgtccatactt
catcagggccagtaccaacccagacccagtttccgtggcaacaaatacacccggagctac
aggtatgctttgaatgagatggataagttcagcctaaaggacagtggaagaggagatagt
gaggcaggagacagtgattgtgagatggggagggagtctcctctgcttggagaaggcttc
agtgagctcttcactcctgatggacatcaccgactgcatccaacgatgaagctgtgcacc
gaagagtgtcgtgtcctcggtcactctgaccagtgctggatgcccccgttgccttcccca
gcctcctctgattaccgcagcaacctctacatccctggagaagaccctcaacagaaagcc
acccctgaagcaccacaatctggcgagtcaactctgaggaaaaagagtttctccacgttc
ggcaaggagagcgaggagggagagggggaggcagctgatgcagaagacctgtgcggaacg
acttctctgctgtctgaaatgaacagcgtgttccagaggctcctcccctcctcgctggat
aattacaacgagactaatgaaactgaaaaggtaacagcctgcgccacgggggtgggatcg
ttggaaagaaggaagggtcacttacctggtaaaccaagccctgccacttatcagcagaac
gtggccgtttgggccgccaacacgcatttccaaaatcccggacatggccacgcccccact
agtcacatgacagccctggtggctccgctccccgcccctctgccagctcccatggcagca
tcagcttcctcttcaaaatggctgcctgcaatggaggagattcctgagaatcatgaggaa
gatgagttagagtctgtgctcgggcatctgcacggcaagcgctgcgacagtcgcagcgaa
attatggacgccagcgagctggttgcagaaatcaacaaactccttcaagatgtcaggcaa
agctaa
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