Onychostoma macrolepis: 131553546
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Entry
131553546 CDS
T09350
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
omc
Onychostoma macrolepis
Pathway
omc03013
Nucleocytoplasmic transport
omc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131553546 (upf3b)
03015 mRNA surveillance pathway
131553546 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131553546 (upf3b)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
131553546 (upf3b)
mRNA cycle factors
P-body specific factors
131553546 (upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
FST_N
Motif
Other DBs
NCBI-GeneID:
131553546
NCBI-ProteinID:
XP_058654262
LinkDB
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Position
14:complement(9052889..9059170)
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AA seq
539 aa
AA seq
DB search
MKEDKENTRPREKKVEIKCDEIEKADKPNKEKKEAMTKIVIRRLPPSLTKEDLVEQLQPL
PELDYLEFFSSDTSLFPHLFARAYLNFKNQDDIVLFRDRFDGYVFIDSRGQEYPAIVEFA
PFQKIAKKRSKKKDAKSGTIEDDVDYKKFLEFYNGDEEKFPSNPETLLEEIEAKTKELSA
KKTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEDRRKRKEAEKLKKGE
KASDKDKDQPKDELPKIKLLKKTEKADDGDTEKPKDKPKKQDREKQKEDRPPVGGDTKKR
QNGEHREEKGGKSEDSGHKNYRDRDGDRERDRDRERERRQKEKERIRRQDEERRKRERHD
GESTYKKRDEEGKKDKERVWEKRKNENTGESSVNAHPEKPSRDSKKEDSARKDRLRNKDR
PAIQLYQPGRGAVTGAEEEEQEEMDRQRRREPSGSPRTLKRKLLSEETALCWHNLMSRER
RGSVLIRTNTSKTWCCHQKKSPHFKKKNNSLSMTREHIHVALQCLNEPPKVSVHEQSKS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggaaaacacgcgacccagagaaaagaaagtggaaataaaatgtgac
gaaattgagaaagcagataagccaaataaagagaagaaggaggctatgacaaagattgtg
atccgacgtctccctccaagtcttactaaagaagacttagtggaacaactgcagcctctt
ccggagctggattacctggagtttttctctagcgatactagtcttttcccacatctgttt
gcaagagcctatctgaatttcaaaaatcaagatgacatagttctcttcagagaccggttt
gatggatatgtcttcatcgatagtcgaggtcaagaatatccggcaattgttgagtttgca
ccattccagaaaattgctaagaaaaggagcaagaagaaggatgccaaaagtggaacaatt
gaagatgatgttgattacaaaaagtttttggagttctacaatggtgacgaggaaaaattt
ccttccaaccctgagactttactcgaggaaatagaggccaagacgaaggaactcagtgct
aaaaaaacaacacctctcttggacttccttaagaataaacagaggattagagaagaaaag
aaagaagagaggagacggagagaactagaacgtaaacgcctgcgagatgaagaacggcgc
aagtggagagaggaagacagaagaaaaagaaaagaggctgagaaattgaaaaaaggagaa
aaggcatctgacaaggataaggaccaacctaaagatgaactgccaaaaatcaagctcttg
aaaaaaactgagaaagcagatgatggtgatactgagaagccaaaggacaagcccaagaaa
caagaccgagagaaacagaaggaagatcgacctccagttggaggagacacaaagaagcgt
cagaatggtgaacacagagaggagaaagggggaaagtcagaggatagtgggcataaaaat
tacagagatcgtgatggagaccgagagcgagaccgggacagagagagagagcgaagacag
aaagaaaaagaacgaatcagaaggcaggatgaagaacggaggaaaagagaacgtcatgat
ggagaaagcacctacaaaaagagagatgaggaggggaagaaggacaaggagcgtgtttgg
gagaaaagaaagaatgaaaacactggagagtcctccgttaatgctcaccctgaaaagcca
tcaagggacagcaaaaaagaagacagtgccagaaaagaccgtctgagaaacaaggatcgg
cctgcaattcagctgtaccagccagggcgaggagccgtaaccggggcggaggaggaggaa
caggaggagatggaccggcagcggagaagagagccgagcgggagcccaagaacactcaag
agaaagctgctgagtgaggaaacagctctgtgctggcataacttgatgtctcgagagagg
aggggctctgttctaatcaggacaaacacctcaaaaacatggtgctgccatcaaaagaaa
tccccccactttaaaaaaaaaaacaactctctgtcaatgacacgagagcacatacatgtt
gccctccagtgcctgaatgagccccccaaagtttctgttcatgagcaaagcaagtcctaa
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