KEGG   Onychostoma macrolepis: 131553583
Entry
131553583         CDS       T09350                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
omc  Onychostoma macrolepis
Pathway
omc03420  Nucleotide excision repair
omc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    131553583 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    131553583 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omc04121]
    131553583 (cul4b)
   03400 DNA repair and recombination proteins [BR:omc03400]
    131553583 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omc04147]
    131553583 (cul4b)
Ubiquitin system [BR:omc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     131553583 (cul4b)
DNA repair and recombination proteins [BR:omc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      131553583 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      131553583 (cul4b)
Exosome [BR:omc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   131553583 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW DUF3292
Other DBs
NCBI-GeneID: 131553583
NCBI-ProteinID: XP_058654311
LinkDB
Position
14:9100257..9112683
AA seq 862 aa
MFPTGLPSPNPPPPAQEPRPAASDVHNDSSLTSSKKRKINSSEKEDIDSISSPPKAICNS
SSTTSSSSSSQQQQQHIQKKLRFEDPLDLIGLDVKMAEESCNSAESCSKARNVFLPGGVG
HHANGLTKSVGSTTFSNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKEAVEAIQNST
SIKYNLEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDK
CWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGIL
LLVERERSGEAVDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVP
EYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTAILQKGLNNLLDENRIQ
DLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIID
VCFMKNEKFVNGMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIM
IIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKD
MELSKDIMVQFKQHMQCQNIPGNIELTVNILTMGYWPTYAPMEVHLPPEMVRLQEIFKTF
YLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLAT
GIEDGELRRTLQSLACGKARVLTKTPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKET
VEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIE
SLIDRDYMERDKENPNQYNYVA
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttaccttcccctaatcccccaccgccagcccaagagcccagaccg
gcagcttctgatgttcacaacgacagtagcttaacgtcttctaagaagaggaaaattaac
agttcagagaaggaagacattgattcaatatcttcgcctcctaaagccatttgtaattcc
tcctccacaacgtccagctcttccagttcacaacagcagcagcagcacatccagaagaag
ttgaggttcgaggatccgctggatttgatcggactggatgtgaagatggccgaggagtcg
tgtaactctgctgaatcgtgttcgaaggcgagaaatgtgttcctgcctggaggtgtcggg
catcatgctaacggactgactaagtctgtgggatccaccaccttctccaacagcaaaccc
ggtgctgcgaagaaacttgttatcaagaactttaaagaaaagcccaaattaccggagaat
tacacgaatgagacctggcagaagctgaaggaggcagttgaggccatacaaaacagcact
tcaataaagtacaatctagaggaactctatcaggctgttgaaaatttgtgctcccataag
atatctgccaagctctataaacagctcagagtggtctgtgaagaccatatcaaggcgcag
attgaccagttcagagaggatgccctagacagtgttctgttcctcaagaaaatagacaaa
tgttggcaagatcactgcagacaaatgatcatgattaggagtatatttttgtttttggat
cgcacatatgttttacaaaattcaatgctgccatcaatctgggacatgggcttggagttg
tttcgtttctatatcatcagcgacctgaaggtgcagagtaagacaatcgatgggattctg
cttcttgttgagagagagcggagtggagaggccgtagaccgtagtctcctgaggagtctc
ctgagcatgctctcagatctgcagatttatcaggattcatttgagcagcgctttttggag
gagacaaatcgactgtatgctgcagagggacagagactcatgcaggaaagagaggtgcca
gagtatctccatcatgtcaacaaacgtctggaagaggaggcagatagagtcattacatac
ttagaccagagcacacaaaaaccccttattgccacagtggaaaagcaactgcttggagaa
cacctcactgcaatacttcagaaaggtttgaataacctgctggatgagaaccgtattcag
gatctgtctctgctgtaccagctcttcagtcgtgtgaggggaggtgtgcaggtccttctg
cagcactggatcgagtacatcaaggcctttggaagcacaattgtcatcaacccagagaaa
gacaagacaatggttcaggagcttttggatttcaaggataaagtcgatcacatcattgat
gtgtgtttcatgaagaatgagaagtttgttaatggcatgaaggaggctttcgagaccttt
atcaataaacggccaaacaaacctgctgagctcatagcaaaatatgtggattcaaagctc
cgtgctgggaacaaagaagcgactgatgaggaacttgagaaaatgttggacaagataatg
atcatattcaggttcatttatggcaaagatgtttttgaggccttctacaagaaagacttg
gcgaagaggttactggtgggaaagagtgcctcagtagatgcagagaaatcaatgctgtca
aaactgaagcatgaatgtggagctgcatttaccagtaagctggaagggatgttcaaagac
atggagctgtcaaaagatattatggtgcagttcaaacagcacatgcaatgccaaaatatt
cccgggaacattgagctgacagtgaacatcctcactatgggttattggccaacatatgca
cccatggaagtacatctgcctccagagatggtaagattgcaggagattttcaaaacgttt
tacctgggcaaacacagtggacggaaactacagtggcagtctacgttaggacattgtgtt
ttaaaggcagaattcaaagagggcaaaaaagagttgcaggtttccctgtttcagacgtta
gttctgctgatgtttaatgaaggggaggagttctctctggaggatattaaactggctaca
ggcattgaggacggtgagctgaggcggactctgcagtcactggcctgtgggaaggctcgt
gttcttaccaaaaccccaaagagtaaagacgtggaggatggagacaagttctcttgtaat
gatgatttcaaacacaaacttttcaggattaaaatcaaccagatccagatgaaagaaacg
gtggaggagcaagccagcactacagagagagtattccaggaccgtcagtaccaaatcgat
gctgccattgtccgaatcatgaagatgaggaaaactctcagccataaccttctggtctct
gaagtgtacaaccaacttaaattcccagtcaagcctgctgatctgaagaagaggatagag
tcacttattgaccgggactacatggaaagggataaggagaatcccaatcagtacaactac
gtggcttag

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