Onychostoma macrolepis: 131553721
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Entry
131553721 CDS
T09350
Symbol
clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131553721 (clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131553721 (clp1)
Enzymes [BR:
omc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
131553721 (clp1)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
131553721 (clp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
TniB
MMR_HSR1
CbiA
AAA_16
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
131553721
NCBI-ProteinID:
XP_058654551
LinkDB
All DBs
Position
14:17266723..17271753
Genome browser
AA seq
445 aa
AA seq
DB search
MTAEASEKSAEEGMSSSGSAGTSGTRFDLDKETELRFEVEAGERVQLELLSGLGEVFGSE
LNRNKKYTFGPGSKIAVFTWHGCSVALSGKTEVAYISKDAPMLLYLNTHAALEQMRRQAE
KENDRGPRVMVVGPTDVGKSTVCRVLLNYAVRLGRRPTLVELDVGQSSVSVPGTMSALCI
ERPADVEEGFSVQAPLVFHFGSTTPGTNIKLYNKLTSSLAEVFSQRCEVNRRASVGGCII
NTCGWVKGSGYQALVHCASAFQVDVVLVLDQERLYNELKRDLPHFVRVVLLPKSGGVVER
SKDCRRESRDEKIREYFYGFRGTSFYPHAFDVRFSDVRIYKIGAPSIPDSCLPLGMSQDD
TQLKLVPVSPGRDLTHHVLSVSSLDDDAEVGAGQSRGILESPVCGFIVVTAVDTQAQVMT
VLSPAPRPLPRHTLLIMDIRFIDLK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagaagcctcagaaaagtcggcggaggagggcatgagctcgtcgggtagcgct
gggacttcaggtacgcggttcgacctggataaagagacagaactgcgctttgaggtcgaa
gcaggcgaacgagtccagctcgagctgttgtccggtctgggagaggtgttcggatccgaa
ctgaaccgaaataagaagtacacttttgggccaggctctaagattgctgtgttcacatgg
cacggctgcagtgttgcgctttctggcaagacggaggtggcttatatctccaaagatgca
cccatgctgctgtatctcaacacccatgcagctcttgagcagatgagacgtcaggcagag
aaagagaatgacagaggccctcgggtaatggttgtcggaccaactgatgtgggaaagtca
acagtatgtcgagtgttgctgaactatgctgtgcgactgggacgaaggcctacgcttgta
gaactggatgtcggccagagcagcgtctctgtgcctggaactatgtcagctctgtgcatc
gagcgtcctgctgatgtagaagaaggcttctctgtgcaggctccgcttgtctttcacttt
ggctctaccacaccaggaacaaacatcaaactgtacaataagctgacttccagccttgca
gaagtgttttcccagcgatgtgaggtgaaccgcagggctagtgtgggtggctgtataatc
aacacctgtggctgggtcaaaggttcaggctaccaggctctggtccactgcgcttcagct
ttccaggtggatgttgttctagtcctggaccaggagcgtctctataatgagcttaaacgt
gaccttccacactttgtacgtgtcgtcctcctgccaaagtccggtggagtggtggagcgc
tccaaggactgtcgacgagagtcacgggacgaaaagatccgggaatacttctacggcttc
cgtggaacttccttttaccctcatgcttttgatgtgcgcttttcagatgtgcgtatttac
aagatcggtgcaccctcaattccagactcctgtctccctctgggtatgtcccaggacgac
acccagctcaaactcgtcccagtcagccctggcagggatttaacccaccatgtgctgagt
gtgagttcgttggatgatgatgccgaggtgggtgcaggacagagcagagggattctagag
agtcccgtgtgtggcttcatagttgtgacagcagtggacacacaagctcaggtgatgacg
gtactctcaccagcacccagaccgctgccacgacacactctgctcatcatggacattcgt
ttcatcgatcttaaatag
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