Onychostoma macrolepis: 131553743
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Entry
131553743 CDS
T09350
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
omc
Onychostoma macrolepis
Pathway
omc02010
ABC transporters
omc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131553743 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131553743 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omc02000
]
131553743 (abca1b)
Transporters [BR:
omc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
131553743 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
131553743
NCBI-ProteinID:
XP_058654577
LinkDB
All DBs
Position
14:19528907..19565066
Genome browser
AA seq
2282 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELISAVKVMQNNTAGFKLKDFLRENETLSTFLQQNASFSHNYVQNILEADVNLE
KVLIKGFGVHLKDMCSTTTLEDFVNIPDERVARFTQDLICSAPNSWLDQAERHFKSNLDF
LKPVRSDIRTNATDVRLVAKATDNLLESLGSLAVELASMRSWSDLRNEILFLTKNATGSP
SLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGSHNDSDDEPVSVYDNTTTPYCN
NLMKNMEASPISRMIWRALKPLLMGKILYTPHSPATQKIIHEVNKTFQELGILRDLGGMW
EEAKPKVWNFMENSEEMDLMRMLLRNNATASFFSAQLAGTQWSVEDVISFLSKHSEDKRP
HGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTEEKMVNESMSLLDNRKFWAGIV
FLDIQSNSTELPPHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYIWGGFTYLQ
DIVEHSIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKMGNLLPYSDPGV
VFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSAKV
IASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPMEEDNYNLTTCLILMYFDAFLYGV
MTWYIEAVFPGQYGIPRPWYFPFTKSYWFGESNTNNTAVHGKKSNAGAVRIEEEPTHLEL
GVYIKNLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
YIMGKDIRSELSSIRRSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEDVKAEMEQILT
DTGLPHKRKCRTSQLSGGMQRKLSVALAFVGGSRVVILDEPTAGVDPYARRGIWDLLLKY
RAGRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKNTEPS
LSSCRNSSSTVSFVKKDDNASESSSDAGLGSDQESEAATAIGTTWTESPVIPVDVALISS
LILKHVPASRMVVDLGHEITYVLPYESAKDGAFVELFHDLDDRLAELGISSYGVSDTTLE
EIFLKVAEDSGVDTEIISDGTLPVPRHRRHAFGADHQSCLKPLTEDDNFDCNNSDGDPES
KETDYLSVSNGKGSYQVKGWTLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIAL
VFSLIVPPFGKYPSLALNPWMYEEQFTFISDDAPHDISTQKLLNALLDDPGFGTRCMAGE
PIPDTPCTMGDEEWSSPEVAESVMEIFTSTNWTMDNPSPACECSCNGKKKMLPECPASAG
GLPPPQIKMSETETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARST
QVLPPAEEIDDAISRVREIFQLEKDSGSAADRFLKSLSAFINGLDTKNNVKIWFNNKGWH
SIGAFLGVMNNGILRANLPPGKDPRQFGITAFNHPLNLTKEQLSQVALMTTSVDVLVSIC
VIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPLLYWLANFLWDMCNYVVPATLVILI
FVCFQQKAYVSATNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGIN
GSVSTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERFGENRF
RSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFFEPKSLSAKLSPIGEEDEDVARERQ
RIMSGAGQGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLT
GDSVVTKGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKE
VCEVAEWGIRKLGLVKYVDKKAGSYSGGNMRKLSTAISLIGAPPVVFLDEPTTGMDPKAR
RALWTCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYT
IILKVAGPDPDLQPVMKFIESELPGSNLKEKHRNMLQYQLPSSLTSLAHIFSILAKNKEF
LRIEDYSVSQTTLDQVFFNFAKDQSDDHSDSSIRSKETAVNMALLSPLSVKENMEKPIES
FV
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctccactcagttgggtctgttgttgtggaagaactttacctacagaaggaga
caaacgctccaactgctgacggagattgtgtggcctctctttattttcttcatcctgatt
gctgtgaggttgaactacccaccttatgagcaacatgaatgtcactttcccaacaaagcc
atgccctcagcaggcaccctgccctggatccagggcatcgtctgcaatgccaacaatccc
tgcttccgacacccaacccctggggaatctccaggagtcgttggaaacttcaacgattcc
ataatctcacgcctgttttctgatgccaagaagatcttactgtacagtcaaaatgacaag
agcttagatggattcaaggagcttatcagtgcagtgaaagtcatgcaaaacaacacagct
ggtttcaagctgaaggacttcctgcgtgaaaatgaaaccctttccacgttcctccagcaa
aacgcctccttttcccataattatgtgcagaatattctggaagctgatgtgaatcttgaa
aaggtgctgatcaaaggctttggcgtccatctgaaagacatgtgtagcaccaccacactt
gaggattttgttaacatcccagacgaaagggtagcgagattcacccaagacctcatctgt
agtgctcccaatagctggctagaccaggccgagagacacttcaagtccaacttggatttc
ctcaaacctgttaggtcagacataaggactaatgccactgatgtccgtctagttgccaaa
gctacagacaaccttctggagagcctgggatcactggctgtggagctggccagtatgagg
agctggagtgacctgcgaaacgagatcctgtttctgacaaaaaacgccactggctcgccg
agtctgatgtaccaggctgtgtcccgtattgtgtgtggacacccggaaggcggtggcctc
aagatcaaatccctcaactggtatgaggacagcaacttccaggcgctgtttggcagccac
aacgacagtgatgacgaaccagtttcagtctatgacaacaccaccactccctactgtaat
aatttgatgaagaacatggaagccagtcccatctctcgaatgatctggagagcattgaaa
cctctcctgatggggaagatcctctacacaccacacagccctgcaacacagaagatcatt
catgaggtcaacaagacatttcaggagctcggaattctacgagatttaggcggaatgtgg
gaagaagccaaaccgaaggtttggaacttcatggagaacagtgaagaaatggatctgatg
cggatgcttcttcgaaacaatgccactgctagtttcttcagtgcccagttggctgggact
cagtggagcgtggaggatgttataagcttcttgtctaagcactccgaggacaagcgtccc
catggaacggcatttacgtggcgggatgtcttcaatgagacagatcaggccattatgagc
atatcccgtttcatggagtgtgtaaacctagataaacttgaacctgtgagcacagaggag
aaaatggtgaatgagtccatgagtctcctggacaacagaaaattttgggcgggaattgtg
tttctggacattcagtccaacagcactgaacttcccccacacgtcaattacaagatccgc
atggacattgacaatgtggagcgcacaaacaagattaaagatgggtattgggatcccggt
cccagggctgatccgtttgaggatatgcggtatatttggggaggatttacttaccttcag
gatatagttgaacacagcattatcagagcagttactgggaccaaagagaagactggtgtt
tacattcaacagatgccttatccatgttatgtagatgatattttccttcgcattatgagc
cgttctatgccgcttttcatgactctagcctggatgtactcagtggccatcatcatcaaa
ggcgtcgtctacgagaaggaagcccggctcaaggagaccatgaggattatgggattggac
aatggaatcctgtggttcagttggttcattagcagcctcatccctcttctcatcagcgca
ggcctgctggttcttctactcaagatgggtaatctcctgccctatagtgaccctggcgta
gtcttcctcttcctcgggtcattcgctgtggtaaccatcatgcagtgttttctgatcagt
acggcgttcgcacgtgccaacctggcagcggcttgcgggggcattatctacttcaccctc
tacctgccttatgtgctctgcgtggcttggcaagactacgtgggcttcagcgccaaagtc
atcgctagcttactgtctccagtggcgtttggatttggctgcgagtattttgccctgttt
gaagagcagggtgtgggcatccaatggaataacctcttctccagcccaatggaagaagac
aactacaacctcaccacctgcctcatcctcatgtactttgatgccttcctgtatggggtc
atgacctggtacattgaggccgtgttcccagggcagtatggcattcccaggccatggtac
ttccctttcactaaatcctactggtttggagagagcaacacaaacaatactgcagttcat
ggaaagaagagcaatgctggggccgtccgcattgaagaggaacccactcaccttgaattg
ggagtttacattaagaatcttgtgaaggtttaccgtcatggcaaaaagctagcagttgat
ggattgacacttggcttctatgaggggcaaataacttcttttctaggtcacaatggagct
ggaaaaaccaccaccatgtctatcctaactggacttttccctcccacctctggcactgca
tatatcatgggcaaagatattcgctcagagctcagttccatcagacggagcctcggagtg
tgtccacaacacaatgtactcttcagcatgttgactgtagaagagcacatctggttctac
gcccgtctgaagggtctgtctgaggaggatgtgaaggctgagatggagcagattctgact
gatactggccttccacacaagcgcaaatgcaggaccagccagctgtcaggtggtatgcag
aggaaactctcagtagcacttgcttttgttggagggtcaagggttgttattctggatgag
cccactgctggtgtggacccatacgctcgaagaggcatctgggaccttcttctgaagtat
cgtgcaggtcggactatccttctttccacccatcatatggatgaagcagatattctgggt
gaccgtattgctatcatctcccatggaaagctttgttgtgtgggctcttcgctctttctt
aagactcaactgggaactggatactatcttaccttggtgaagaaaaacactgagccttct
ctcagctcttgcaggaactcaagcagcactgtgtcctttgttaagaaagatgacaatgca
tctgagagcagttcggatgctggtctaggtagtgatcaagagagcgaagccgccacagcg
attggaactacatggaccgaatctcctgttattcctgttgatgtggccctcatctccagt
ctaatcctgaagcacgttcctgcttctcgcatggtggtagacctcggtcatgagatcaca
tatgtgttgccgtacgagtctgccaaagatggtgctttcgttgagctcttccacgacctg
gatgatcggcttgctgaacttggcatttcaagctatggtgtatcagatactacactagaa
gagattttccttaaagtggcagaagacagtggagttgatactgaaatcatctcagatgga
actctgccagtgcccagacatagacgacacgcatttggcgctgaccaccagagctgcctc
aaacccctgactgaagacgataactttgactgcaacaactctgacggtgatccagaatcc
aaagagacagactatttgagcgtttccaatgggaaaggatcatatcaagtgaaaggttgg
actttgaagaggcaacagtttgtggctttattgtggaagagatttctttatgctcgccgc
tcaaggaaaggcttctttgcacagattgttcttcccgctgtgtttgtgtgcattgctctg
gtattcagtcttattgtgccaccatttggaaaatatcccagcctggctctcaatccctgg
atgtatgaagaacagttcacattcatcagtgatgatgctccacatgatataagcacacaa
aaattactcaacgctttattagatgatcctggctttggaacacgatgcatggcaggagaa
ccaattcctgatactccctgtacaatgggcgatgaggaatggtcttcaccagaagtggca
gaaagcgtgatggaaattttcacgtcaacaaactggaccatggacaacccatcacctgct
tgcgagtgcagctgtaatggcaaaaagaagatgctcccagaatgccctgctagtgcaggt
ggactaccacctcctcagattaagatgagtgaaactgagaccctccagaacctgacggga
cgaaacatctcagactatctagtgaagacctatgcacagatcattgggaaaagtttaaag
aacaagatatgggtgaatgaattcagatatggaggattttcattgggagctagaagcact
caggtacttcctcctgctgaagagattgatgatgccatctctagagtcagggaaatcttc
caactggagaaggactcaggatcagcggctgaccgtttcttgaaaagcctgtcagccttc
atcaatgggctggacactaagaataatgtcaagatatggttcaataacaagggctggcac
agtattggagccttcctcggtgtaatgaacaatggtatcttgcgtgccaacttaccacct
ggcaaagacccccgtcagtttggcatcactgcatttaaccatccactcaatctgaccaag
gaacagctttctcaagtggccttaatgaccacctcagtggacgtgctggtttccatctgt
gtgatcttcgccatgtccttcgtccctgccagcttcgttgtcttcctcattcaggagcga
gtgaataaggccaagcacatgcagtttatcagtggagtgcagccattgctctactggctg
gccaactttctctgggatatgtgcaattatgttgttcctgctactctggtgatcctgatc
tttgtgtgctttcaacaaaaagcctatgtctctgcaaccaacctgcctgttctcgccctt
ctactgcttctttatgggtggtccatcactcctcttatgtacccggcttcattcctcttc
aaaatccccagcaccgcttacgtggtgctcactagtgttaatatcctcattgggatcaat
ggcagcgtgtccacttttgtcatggagttatttggaaataacgagattggtggcattaat
gacatcctgaagaacgttttgctcatcttcccacatttctgcctgggtcgaggtctcatc
gacatggtgaagaatcaggccatggctgacgctctggagagatttggtgagaaccgcttc
cgttctccattggagtgggacatggtgggcaagaatctttttgctatggctgtggaagga
gtggttttcttcatcatcacagtccttatccagtaccgtttcttctttgaacccaagtct
ttaagtgccaagttgagtccgatcggagaggaagatgaggatgtggccagagagaggcag
agaatcatgagtggagctggacagggagacattcttgaactcagacaactcactaaggtg
tacaagcggaaacagaagcccgctgtcgatcgtctatgtgttggcattcctccaggagag
tgttttggtctgcttggtgtcaacggagccggaaagacaagtacttttaaaatgctgacc
ggagactcagtggtcacaaaaggagaagcattcttggctgggaaaagtatactcagagaa
atagatgaagtacatcagaacatgggctactgccctcagtttgatgccatcaatgatctg
ctgacaggacgggaacacctggaattctatgccatcctgcgcggtgtacctgagaaggaa
gtttgtgaggtggcagagtggggaatccgtaaactgggccttgtgaaatatgtggacaag
aaagcaggaagctacagcggtggcaacatgcgcaaactctccaccgccatatcactcatt
ggagccccaccagtggtcttcctggacgagcccaccactggaatggaccccaaagcacga
cgagcactgtggacctgcatccacagcgtcatcaaagagggacgctctgtcgtactcacc
tcacacagtatggaggaatgtgaagcgctgtgcaccaggatggccatcatggtgaacggc
aggttccgctgtctgggtagtgtccagcacctgaagaacagatttggcgatgggtacacc
atcattctgaaggttgcggggccagatcctgacttgcagccggtgatgaagttcattgag
agcgagctgccaggaagtaacctgaaagaaaaacacagaaacatgctgcaataccagctt
ccctcttccctcacctccctcgctcacatcttcagcatactcgctaagaacaaagagttt
ctcaggatagaggactactctgtgtcccagaccactttggaccaggtattttttaacttt
gcgaaggaccaaagtgacgaccactcagacagctccattcgcagcaaagagacagcggtc
aacatggccctcctgagccctctgtctgttaaagagaacatggagaagccaatagaaagc
tttgtgtga
DBGET
integrated database retrieval system
