KEGG   Onychostoma macrolepis: 131553864
Entry
131553864         CDS       T09350                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
omc  Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:omc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omc03041]
    131553864 (smu1a)
Spliceosome [BR:omc03041]
 Complex B
  Other components
   Complex B specific factors
    131553864 (smu1a)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_ACSF4 Beta-prop_TEP1_C Ge1_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_BBS7 Beta-prop_SCAP WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd DUF7165 Beta-prop_NOL10_N LisH LisH_PAC1 PA14 VPS8_N zf_topless TolB_like LisH_WDR26
Other DBs
NCBI-GeneID: 131553864
NCBI-ProteinID: XP_058654799
LinkDB
Position
14:19443145..19451161
AA seq 513 aa
MSIEIESADVIRLIMQYLKENNLQRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLARHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMMATGAQDGKIKVWKIQSGQCLR
RYERAHSKGVTCISFSKDSSQILSASFDQTIRIHGLKSGKSLKEFRGHSSFVNDATLTPD
GHHIISASSDGTVKVWNVKTSECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCSLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNMIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctattgaaatagagtcagcagacgttattcgtctgatcatgcagtacctgaaggaa
aacaacttgcagcggactttagcaactctccaggaggagacgacggtgtctctcaacaca
gtggacagtattgagagttttgtggcagatatcaacagcggtcactgggacactgtgctt
caggctatacagtccctcaaactccctgacaagaccctcattgacctttacgaacaggtt
gttcttgagctgattgagctccgagagctgggagctgccagatctttgttgaggcagact
gaccccatgatcatgctgaaacaaacccaacctgagcgatacatccacctggagaatctt
ctagcacgctcttactttgaccccagagaggcctatcctgatggcagcagtaaggagaag
cgtagagcagctatagctcaggctcttgctggtgaggtcagtgtggtaccaccatcacgt
ctgatggctctgcttggacagtctctgaagtggcagcagcatcaaggtcttctgcctccc
ggtatgaccattgatttgttcagaggtaaagcagctgtgaaagacgtcgaggaggaacga
ttccccactcagctggccagacacatcaagtttggtcagaagtctcatgtcgagtgctcg
cgcttctctcctgatggccagtatctggttactggatctgtggatggatttattgaagta
tggaacttcactactggaaaaatcagaaaggatctgaagtatcaagctcaggataacttc
atgatgatggatgacgcagtgctgtgcatgtctttcagtcgggacacagagatgatggcc
acaggagcccaggatggcaagattaaggtgtggaagatccagagcggtcagtgtctgcgg
cgatatgagcgtgctcacagtaaaggtgtcacctgtatcagcttcagtaaagacagcagt
cagattctctctgcatcctttgatcagaccattaggattcatggattaaaatcaggcaag
tctttgaaggagttcagaggtcattcttcgtttgtgaatgatgccacacttactcctgat
ggtcatcacatcattagtgcctcatctgatggaactgtgaaggtctggaacgtgaagacc
tcagaatgcaccagcacattcaaatctttgggcacgtctgcgggaaccgacatcactgtt
aacaatgtgatcctgcttcctaaaaaccctgagcattttgttgtgtgtaaccgatccaac
actgttgtcatcatgaacatgcagggccagattgtgaggagtttcagctctggtaagaga
gagggtggtgattttgtatgctgttctctgtctccacgtggcgagtggatctactgtgtc
ggcgaggactttgtgctttactgtttcagcacagtcacaggcaaactagagagaaccctg
accgttcatgagaaggatgtcattggtattgcccaccacccacaccagaatatgatcgcc
acatacagtgaggatgggcttctcaaactctggaagccataa

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