Onychostoma macrolepis: 131554036
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Entry
131554036 CDS
T09350
Name
(RefSeq) protocadherin Fat 4 isoform X1
KO
K16669
protocadherin Fat 4
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omc04515
]
131554036
Cell adhesion molecules [BR:
omc04515
]
Cadherins
Cadherin related
131554036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Fibulin_C
EGF
Cadherin_pro
EGF_TEN
Cadherin_4
EGF_CA
K319L-like_PKD
EGF_2
hEGF
Ig_Shg
GluR_Homer-bdg
DUF7378
Motif
Other DBs
NCBI-GeneID:
131554036
NCBI-ProteinID:
XP_058655042
LinkDB
All DBs
Position
15:complement(21194672..21217794)
Genome browser
AA seq
3024 aa
AA seq
DB search
MNKFGLLHLCIFLMHATIFFYGVCSNSSSQTQTENSNEKKWFNISALPSTGLAPLRSRGF
TQLSFSKSVYSFEVREDTPPGTIVGHVEMVYSEENETSVYSVQEDDGDGLFLLNPHSGEF
LLSRALDFEVERYYILTAAAQQGDSELTMVRVYFNVIDVNDNPPVFSQNAFSASIPENSP
VGMCFLNLNVSDPDEGIYGEVDLLVTSGNLESKFSINQHQALCLRGELDRETNAMYSLII
QASDRALPIEARLTTSVDVTIYLLDVNDNSPLITTPSTVSFPENAPLHSVVTVIQATDAD
AGSNGEVDFSFESAEKQPFSINSLTGVVYLQKPLDRETEDVLTVTLNVKDKGVPQLFNSM
NLTVLIEDVNDHNPEFTQSSYSLSVYEDVPRGTSLLRVNARDQDIGSNGQVRFFVSESGF
MVDSVLGVVSVIDKMDREKKPFYSFFVIAEDLGDIQRSATATINITVLDVNDCVPLFSSE
SLTLHVFENGEDSSQHSHQIHASDEDSDEVNGQLTYSIESGNDESLFSLRSNGTFQILED
LDRELKSQYMLKVIAVDSGFPSLTGTGTLVIVVDDVNDNIPIFDSESFSTHILEDSPTET
VFLRVTASDPDDGTNGQLRYSLEGLDLPFSINETSGDLFTISALDRETVAFYQFLVTVTD
GHPMKHLSSSAVVSVTVEDVNDHFPSFLYGPYTANVPALITKGSVVCTVMAEDADAGLNA
KLNFSLHGQHAHLFSINSRTGTVFMKDSVKRRNDITVEVHVQDGADLPKMDTTTLTVRFQ
NNTYFPHIAVQVYKDVLSEDVPTGTLVAIVTAETQRNAPVSFYLASGNFGEVFEVHHSTG
ELTVKDPLDFETNMYFHLIVEARDSGIPPFSSYAELNLNISDVNDNPPVFSQNLYRCEVY
ENLDSSRVCNVLATDADSGVFSEVEYFILAGNTEGTFKIDKIHGSLFTTKLLDREKIPYY
NLTLKTVDKENNSLSAIAAVIVVVLDTNDHAPRFSQIFITEVPEDAPVGFSVIQITVTDE
DVGLNAVIEYTIIGQNGELPFSIDKTTGTLLVLHHLDREDQDHYIVKVNANDSAWSISTD
VTIDITDINDNTPIFYQPLYTLTVPEMKMHEVFLLQISATDRDLGENAQILYFIDPPNEL
FLVNASTGEISTKQPIVLHESESVNFTFTVVASDCGSVPLNSSSIVSVTSVRHNQLPPSF
LPFRPLVPVPLTLDVGTEVIQISAVDQDSLEMNNSVEYFNSGGNGSLYFEVEHNSGRVLV
YKTLVNSLNTILRLLITAKDKGLPPLSAQTVISFEVTRENLFAPHFLNSKVEFFVPEDLS
IGSVIGKIQGKDKDPGINGVISYSFDGGNENGLFSVGQSSGLIMLVKTLDFEEFETHHLN
VIAKDGGWRPKMERLNIIVYVTDLNDSPPVFTSTNYIATVSENALIGTTVLQVWAKDADT
GIHSQITYSLIAGDSHLFYLDTKNGTITTLVMFDYEKNQNFELKVKASNIGFPYLFDIAR
IHIQIIGLNEFIPAFQKHLYNFTVSEALVPQTEIGRVVAIDYDQGPDGEVFYVLAGQSKK
ANFVVDEHTGIIYISKDLKNRLQNDEVLRVLAKNRGAITGFNVDEALIHLQILDENDAPE
FESMFYTAAVSEDISIGTSITKVKAVDRDAILEWSRFSYSIEHGNINSSFTIDPVSGVIS
VNSHLDREMWAIYNLTVIAVDEGSPAVTGSTKVAITITDVNDNPPKLLTTEGFIRENRPA
GTLVSTLAATDDDLPPNQGPFTYWMMRPTEGFSLTSDGVLFTLRPFDRERNPLFHIHIVV
QDAGKPPMSSTTLFHIKVLDENDNAPLQRNINILVKYYGSYFPGGLIGNVRPTDQDELDV
FNCTIKNGPLRMFSFPFGMCNLWSSSYQGEATYNISVEASDQLHPSVNNSIYVNYKGFTN
VSLDNCVLFYISISTLEEFLSLKYLKFVKALDSLFNLQASKTHVFGMKLQGDKMLLLAAV
KSYNGQYLTGEVARGISNMHKKLLEAQSNVTISQITSDPCMLHPCHNGATCNRNIHISQE
VAVLESSSLIFVSPYFVEIFNCSCPAGFTGDACELDFDECAKEPCENGGNCYNNPGTYFC
QCKDGFSGPHCTIVDNECQTVICLNGGTCWNRQGGFICDCSPGYEGTFCDRIVDHCASFP
CVYGICSSFLTGYSCQCPFGVSGVNCEEHSYGFQEISYIEFPPLDPQYNFIYLEFATVQQ
NALLLYNHGDPSTSDFLALEIVSGRLWLSYDLGSGVIRLETGKVVADGSFHNITVRRTGN
IASLEIDNCSPHEPQGFCSSQNGATGTQRTLEVSSNNMTFGGVKSIDVILQRQIRTHDFV
GCMRNMQVNNFSPDSLKSLASQNVLDRCPRADNPPCETAVCLNEAVCQDRWSHHHCQCRD
QFTGPNCAMMSVILFLIDLAEQHVLFLSGEAYIEFAVKESYRRNQILQAILDGKEGDSQG
FDSVEIKMRTVRRNGVLVVCWCQTAHLKLQISNGKPLYVFTNVTSGQRMEHLMEGNVSDG
QWHVLHLRRRGSYMTLFLDERPVVNTTNGTITHPTFLVETIFLGSSPLKESRDVREIIQN
LGFRGCVEYIKFNGHLLSYNGYNEIVDANSSPPVFQTFCISPNHCVLTPCLKDSCLSEPC
WNDSDCGSSSKDDYWCICLYNVSSCGSCSSDVVHSEACSQTQESKVPVWIVAVILPIVLI
LLILVLCIILRRQDKLCEGEKMPPSKQHGTDNLGFSLGPLDECPQNVSNEASKQPDLIKP
RDPMQGVESYTESGPSCHVSGFGGSELEYYEIDSTYSDVKTLQLKKEDERGEQVNGNPIV
SQSIMQPQTNHNLSPKLHQRTSGGDINQWQRQSQLFFKRKLAPDLTGPPQHLSADEVEKL
KTPQNHKGYSNQNITECPIKPCRDGPVETSSESESHCSFTGSEFDCERELSLISSHDKDE
HPPEDWSRRQFILKAPSPFRDVVSSPSVQSLPNTSVSGGIQQLENLLNLGVHFNTYVDVF
EDIASLPTHQPNDCDFQSDQEEII
NT seq
9075 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatttggattactacacctctgtatatttctcatgcacgcgacgattttcttc
tatggtgtttgttctaacagttcatcacagacacagacggagaatagtaatgaaaagaag
tggtttaacatttcagctctgccatccacaggcttagctccacttcgtagtagagggttt
acacaactatccttttccaaatctgtatattcatttgaagtgagggaagacacaccacct
gggacaattgtgggacatgtggagatggtatatagtgaggagaatgaaacctcagtgtac
tctgttcaggaggatgatggtgatggtcttttccttctcaatccacattctggcgaattt
ctcctgtctcgtgctctggattttgaggtggagcgctactacatcctgactgcagcagct
cagcagggggacagtgagctcaccatggtcagagtgtacttcaacgtgatcgatgtcaat
gacaacccaccagtgttcagccaaaatgccttctcggcctccataccagaaaactcacct
gttggaatgtgcttcctaaatctgaatgtttcagatccagatgagggtatatatggagag
gtggatctgttggtgacatctggaaatcttgagagcaagttctctataaaccagcatcaa
gctctttgtctaagaggggagttagacagagagacaaatgcaatgtatagcctcattatc
caggccagtgatcgtgctctacccatagaggctcgactcacaacctcagtggatgttacc
atctatcttctggatgtcaatgacaactcccctctcatcacgacccccagtactgttagt
tttccagagaacgcacctcttcattctgtcgttacagttatacaggccacagatgctgat
gctggatccaatggtgaagttgatttcagttttgagagtgcagaaaaacaaccattcagt
ataaatagtttgactggggttgtgtacctacagaagccattggacagagaaaccgaggat
gttctcacggtcacattgaacgtcaaagataaaggtgttcctcaattgttcaattcaatg
aacctcacagtgcttattgaggatgtgaacgatcacaatccagagttcactcaaagctcc
tacagtctttcagtatatgaggatgtacctcgtggaacaagcctgctcagagttaatgca
agagatcaagatattgggtcaaatgggcaggtgcggttctttgtctcagagagtgggttc
atggtggactctgttctaggtgtggtctcggtgatagacaagatggaccgtgagaagaag
cctttctacagcttttttgtcatagcagaagacctgggagatattcaaaggtctgccaca
gcaaccattaacatcacagtcctggacgttaatgactgtgttcctcttttttcatccgaa
tcactgacattacatgtcttcgaaaatggggaagactcttctcagcactcccatcagata
catgcctctgatgaagattctgatgaagttaatggtcagctgacatattctatagaatca
ggaaatgatgagagtctcttctcacttcgttccaatggaacgttccaaatcttagaagat
cttgatagagaactgaaaagccaatacatgttaaaagttattgctgttgattcaggattt
ccgtcattgacaggcacaggcaccttggttattgttgttgatgatgtcaatgacaacatt
ccaatatttgacagtgagtcatttagtactcacatattggaggattcacctactgagact
gtttttctgagagttacagcttcagacccagatgacggtaccaatggacagctaagatat
tctttagagggcctagatctacccttttccatcaatgaaacatctggggatttattcacc
ataagtgccttggacagagagacagtggctttttaccaatttttggtgaccgtcactgac
ggacatccaatgaagcatctttccagttcagctgtagtttcagtaacagttgaggatgtg
aatgatcacttcccgtccttcctttatggaccatatacggctaatgttcctgctttgata
accaaaggatcagttgtctgcacagtgatggcagaagatgcagatgctggattgaatgca
aaactaaatttttctctacatggccaacatgcccatctcttctccattaactctcgcaca
ggaacagtgtttatgaaagattctgtgaagagaagaaatgatatcacagttgaagttcat
gtgcaggatggagcagatctgccaaaaatggacacaacaaccttgactgtcagattccag
aataacacatactttcctcatattgcagtccaagtttataaggacgtcctctctgaggat
gtgcccacagggaccctggtggctattgtcactgcagaaacacaaagaaatgcaccagtg
tctttctatttggcctctggaaactttggggaggtttttgaggttcaccacagcactggt
gagctgactgtcaaggatcccttagattttgaaaccaacatgtattttcatctaatagtt
gaagccagagactcagggataccgcctttttcgtcatatgccgaacttaatttgaatatc
agtgacgtgaatgataacccaccagtgttctcacaaaacctctacagatgtgaggtgtat
gagaacttggattcaagtagggtgtgtaacgtgttagcaactgatgcagactctggagtg
ttttcagaggtggagtacttcattttggctggtaacactgagggtacatttaaaatagac
aaaattcatggcagtcttttcacaacaaaacttttggatcgagaaaaaattccgtattat
aatcttaccctcaagaccgttgataaagaaaacaacagtctttcagccattgcagcagtt
attgttgtagttcttgacacaaatgatcatgcccctcgcttctcacagattttcatcaca
gaggttcctgaggatgctcctgttggtttttcagtcattcagataactgttacagatgaa
gatgttggtctaaatgctgtcattgaatatacaatcattggccaaaatggtgagttacca
ttcagtattgataaaaccactgggactttactggtactgcatcatttggacagagaagat
caagatcattatatagtgaaggtaaacgccaatgattctgcttggagcatcagcacagac
gtcaccatagacatcacagatatcaacgacaacacaccgatcttctatcaaccgctttac
actctcactgtccctgagatgaagatgcatgaagttttccttctacaaattagtgctaca
gacagggatcttggtgagaatgcccaaatcctctacttcattgacccaccaaatgaactt
tttttggtaaacgcatcaactggggaaatttcaaccaaacagcctattgttcttcatgaa
tctgaatctgtaaattttactttcacagttgtggcatcagactgcggaagtgttcctttg
aacagctctagcattgtttcagtgacatcagtacgacataatcaattgccaccctcgttt
ttacccttcagacctttagtaccagtccctttaaccctggatgtgggaacagaagtaatc
cagatatctgcagtagatcaagattctcttgaaatgaacaacagtgttgagtactttaat
agtggtggcaatggatctctttattttgaggtagaacataacagcggaagagtgctggta
tataaaactttagtaaatagccttaacacaattctaagacttctaatcactgccaaagat
aaaggccttcctcctctttctgcacagactgtaatcagttttgaagttacacgtgagaac
ctgtttgcaccacattttcttaacagcaaagtggagttttttgttccagaagatttatcc
attggttcagttattggcaaaatccaaggcaaagataaagatcctggcatcaatggtgtt
atttcctattcttttgatggtgggaatgaaaatggattgttctcagtaggacaatcttca
ggattgatcatgctggttaaaacgctcgactttgaggaattcgaaactcaccatctaaat
gtcattgccaaggacggaggctggcgtcccaagatggagagacttaatatcatagtatat
gtgacagatttaaatgatagccctcctgtatttacatctactaattatattgccaccgtt
tcagaaaatgctttgattggtaccacggttttgcaggtctgggcgaaggacgctgacact
ggaattcactcccaaatcacatattcgcttattgcaggagacagccatctcttctatttg
gacaccaaaaatggcactatcaccactttagttatgtttgattatgagaaaaatcagaat
tttgaacttaaagtcaaagcctccaacatcggctttccatatttgtttgatattgcccgt
atacacatccaaatcattggcctcaatgaattcatacctgcttttcaaaaacatctatac
aacttcacggtttcggaggctttggtgccacaaactgaaataggaagggttgttgccata
gactatgaccaaggacctgatggagaagtcttttacgtacttgcggggcaaagtaaaaaa
gctaattttgtggtggatgagcatacgggaataatatacatctcaaaagatttgaaaaat
cgtctccaaaatgatgaagtcctacgggtgctggcaaaaaacagaggggccattacagga
tttaatgttgatgaggcattgatacatctacaaatactagatgaaaacgatgcccctgag
tttgagtcgatgttttacactgcagcagtatcagaggacatctcgattgggacctccata
actaaagtcaaagcggtggaccgggatgcgattctagaatggagcaggttttcttatagc
atagaacatgggaatatcaatagttccttcactatagacccagtcagtggggtcatttct
gttaacagtcacctggatagagagatgtgggccatctataacctgacggtcattgctgtt
gacgagggctctcctgctgtaaccggaagcactaaggtagcaatcactatcactgatgtg
aatgacaatcctcccaaactgttgaccaccgaagggtttatccgagaaaaccgccctgct
ggcactctggtctccactttagcagccacagatgatgatcttcctccaaatcaaggtcct
ttcacatattggatgatgagacctactgagggtttttcgcttacatctgatggcgttctc
ttcaccttgagaccctttgatcgggagcgcaaccctctttttcatatacatattgtggtt
caagatgctggcaagcctccaatgtcctccaccactttgtttcatattaaagttcttgat
gaaaatgacaatgcaccgctccagagaaacattaatatattggtgaaatattatggaagt
tacttcccaggaggactaatcggaaatgttagaccgactgatcaggacgaactggatgtg
ttcaattgtacaatcaaaaacgggccacttaggatgtttagtttcccgttcgggatgtgt
aatttgtggtcctcctcataccaaggtgaggcaacttataatatttccgtcgaagcgagt
gaccagcttcacccttcggtcaacaacagcatctacgtcaattacaaaggctttactaat
gtctctctggacaactgcgtgttgttctacatctctatatctactcttgaagaatttctg
tctttgaagtatttaaaatttgtcaaagcattggatagcctttttaacctacaagcatcc
aaaacccatgtgtttggaatgaagttgcaaggagataaaatgctgcttctggctgctgtg
aaaagctacaatggtcagtatctaactggagaggtggcaagaggaatatcaaacatgcat
aaaaagttactggaagcgcaaagcaatgtgactatatcccaaataaccagtgacccctgt
atgctccatccttgccataatggtgccacctgcaacagaaacattcacatcagtcaggaa
gttgctgtgttggaaagctctagtcttatatttgtatctccatattttgtggaaatcttt
aactgctcttgtcctgcaggctttacaggtgatgcatgtgaactagactttgatgaatgc
gccaaggaaccttgtgaaaatgggggaaactgctataacaatccaggaacttatttttgt
caatgcaaagatggattctcaggaccacactgtactatagttgataatgaatgtcaaacg
gtgatatgtttaaatggaggaacatgctggaacagacagggagggttcatctgtgattgc
agcccaggctatgaaggaacattttgtgatcgtattgttgaccactgtgcttccttccct
tgtgtgtatggcatctgctccagttttttaactggctactcttgccagtgtccatttggt
gtgagtggagtcaattgtgaagagcacagttatggctttcaggaaatttcttacatagaa
tttcctccattggatccacagtataacttcatctatttggaatttgcaactgtgcagcaa
aacgctttgcttttgtacaaccatggtgacccatcaacttcagacttcctggcccttgaa
attgtgagtggaagactgtggctgtcttatgatcttggatctggagtgataagattggaa
acagggaaggtagtggctgatggaagttttcacaacatcaccgtaagaagaactggaaat
atagcctctctagaaatagacaactgctctccccatgaaccgcaaggcttttgctcgtca
caaaatggtgccactggaacccaaaggactctggaagtgagctcaaataacatgacgttt
ggcggcgtaaagtccattgatgtcattttacagaggcaaatcaggactcatgactttgtt
ggctgtatgagaaacatgcaagtgaacaacttcagtccagattccttaaaatctctggca
tcccagaatgttcttgatcgatgtccacgagcagataatcctccttgtgaaacagcagtg
tgtttgaacgaagcagtttgtcaagaccgatggtcgcaccaccactgccagtgcagagac
caattcacaggacccaactgtgccatgatgagtgtaattctgtttttgatagatttggcg
gagcagcatgtattgtttctcagcggggaggcctacattgagtttgctgtcaaggaaagc
tacagaagaaaccagattctgcaggccattctggatgggaaggaaggagattctcaggga
tttgacagtgttgagatcaagatgaggactgtcagaagaaatggtgttttggttgtgtgc
tggtgtcaaactgctcatctaaaacttcagatatcaaatggaaaacctctgtatgtgttc
accaatgtcacatctggccagcgaatggagcacttaatggagggaaatgtgtctgatgga
cagtggcatgttcttcatctgcgcagaagaggctcatacatgactctgtttctagatgaa
cggcctgtagtgaacaccaccaatggcaccataactcaccccacattcttagtggagacc
atttttctgggctcttctccattgaaagaatctagagatgtccgagagattatccaaaat
ttaggtttcagaggatgtgtggaatacatcaaattcaatggccatctcctgtcatacaac
ggctacaatgagatagtcgatgccaactccagcccgcctgtcttccaaaccttctgcatt
tctccaaaccactgtgttctgactccatgtctgaaggattcctgtctgtctgagccctgc
tggaatgatagtgactgtggttcttcttccaaagatgactactggtgtatctgtctgtac
aatgtgtcttcatgtggatcttgctcatctgacgtcgtccacagcgaggcctgttctcaa
acccaagagagcaaagtccctgtatggattgtagcagtcattcttcccattgtcctcatt
cttctgatcctagttctctgtattatcctcagaagacaagacaaactctgtgagggtgaa
aagatgccaccaagcaaacagcacggcacggataacctgggatttagtttaggtcctctt
gatgagtgtcctcaaaatgtgtcaaatgaagccagcaagcaaccagatctgataaaacca
agggatcctatgcaaggagtggaaagctatactgagagtgggccttcttgtcatgtctca
ggttttggaggcagtgaactggagtactatgagattgacagcacatactcagatgtgaag
accctacagctgaagaaggaggatgaacgtggagaacaggtgaatggcaatccaatagtt
tctcaatccatcatgcaacctcaaactaatcataatctatctcctaaacttcatcagaga
acatctggaggtgatataaaccagtggcaacgtcaatcccaactgttcttcaagagaaag
ctggctcctgatctcacaggccctccacaacatctctcagcagatgaggttgagaaactg
aaaaccccacagaaccacaaggggtactctaatcagaatatcacagagtgtcccataaag
ccgtgcagagacgggccagtagagacatcatcagagagtgaaagtcactgctccttcacc
ggctcagagtttgactgtgagagagaactgtctctcatcagctcacatgacaaagatgaa
catccacctgaagattggtccagaaggcagtttattctgaaggccccttcaccgttcaga
gatgtggtctcatccccctccgtccagagtctcccaaacacctctgtctccggcgggata
cagcagcttgagaatcttctaaatctaggagtgcattttaacacctatgtggatgtgttt
gaggacatagccagtttaccgacccatcaaccaaatgactgtgattttcagagcgatcaa
gaggaaatcatttga
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integrated database retrieval system
