Onychostoma macrolepis: 131554178
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Entry
131554178 CDS
T09350
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
omc
Onychostoma macrolepis
Pathway
omc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131554178 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
omc04091
]
131554178 (frem2b)
Lectins [BR:
omc04091
]
C-Type lectins
Lecticans
131554178 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
TMEM154
DUF2970
Protocadherin
Myc_target_1
Motif
Other DBs
NCBI-GeneID:
131554178
NCBI-ProteinID:
XP_058655360
LinkDB
All DBs
Position
15:complement(21983078..22056803)
Genome browser
AA seq
3112 aa
AA seq
DB search
MARSITEQRQRRAFHVHLFLFILTLFRDASAQGFESLGLTYGLRSELSEDAILVANNGIR
VPFGRSVYIDPINDLVTQVQPGDKCTITVLDNDPLSQRPGQLSPKKFPCEFGPNDVKYSH
FGSRSPSKDRVRLQLRYDTQTDTVIIPFMMEVEVIFTQLEILTKHMPVVVEKLLGMSNPI
DKKILEFTYDRNAHLCKVTSLASGSSLPRYGKVIDNGKLGKPVDCDEFVRMDIRYQHTFA
HRSPNRDYIPMYLELQDKEANVLKQEFFQIVVLIKEGEENTAPKPSFVAMMMMEVDQFVM
TAITHDMLAAEDVESNPDDLIFNITSPLSFEEGYIVSTDDRNLPITSFYQTDLKDLKIAY
KPPSVDSDVERIFQIEFEVVDTEGAISDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQSR
PLSSSQNLQISDEDNLDNVQITVINGLRHGELTVLGSRQKFFTPADLDVGSVIYQHDGSD
TYSDNIIFRMTDGKNEVEFLFPITVVPTDDEPPIINANTGLVLFKNQMMPISPLMLSAAD
IDSEDSTIKFILLPPYSTIGEVILRQSDAPEDPSTWRFNSEDEMYEKVVTEWFQQDITEG
KLFYRHIGPHNTKTIMDQFVFRVQDDNDPPNQSGENSFIIKILPIDDIPPGLYPGTTLQV
TVHEYQLTYFRKKFLRYTDLDSEDRDLKYTITQPPTDTDENSPGILGSIVLTESPNSEVI
EFTQAQINHHKIAYKPPDLELGITPHVVQFHYKVEDTAGNSANGVFTIFLQPVDNKPPQI
TNTGFTIQERGAHVITRAELDTTDADTDSSQILFTITQPPKHGQVKYTFTDMTKGNSFNL
DDISNGRISYIHNGDESTSDFFQLDVSDGIHVVTITVRINVKPIDDEAPTISLPEGTIGS
YIDVLENGVTEITTNVIQGRDEDTDDLRLTFIVDDPPVFGEILVNGVPSNRFTQANIISG
LVVYAHNSGEIGLTTKHDFFNLTLTDMSDEWTVGGNKIKGVRVQVTILPLDSQAPEVFVG
PQFIVIEGEKNVIDISHISANDIDTPNDDLLCTIIVQPTSGYVENISPAPGSEKSRSGIA
ISAFTIKDIRENHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPVVIIPSNDEKPE
IHMREFVVMEGMNIVIDTPILNGADADVPSDELTFIISKPPKYGYILNQLTSGTIPVTNF
TLDQIREASSIVYEHDDSETTEDRFDVLLTDGKFTVEKTVMIMVILVDDETPRMAINDGL
EIEVGEVKIINNKVLKATDLDTEDSILTYIIRYGPNQGFLQKRTPFGTFENITVGMNFTQ
NEIDQDMIMYIHNGQEGVRDLIKFDVTDGINPLIDRYFYVTVGGIDMVFPDVISKGVSLK
EGGRVTLTTDLLSTSDHNSPDEHLVFTITRAPIRGHLECTDAPGMPISLFTQLQLAGNKI
YYIHTADDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVVTIHGLVVNEGENKLIT
PFELTVEDRDTVDHLLKFTITQVPVHGKLLFNNTRPVTSFTKQDLNENMIRYKHDGTESA
SDSFSFTVTDGTHTDFYVFPDTVYTTRKPQMMKITIYPVDNGVPQVVTNKGGTTLRILPT
GHLGFLITSKTLKAEDRDSLHGAVTFKITVAAEHGYLIDLGKGNATITTFTQADINDMHI
CYVLRDGDNATSDTFHFSIEDSGGNKLKNQNFRLNWAWISLDKEYYQVDEESKFLEVVLR
RRGYLGETSFVSIGTKDGTAEKDKDFRGKAQKQVQFNPGQTTATWKVRILSDSLYEQAET
FQIVLSEPVMGALEFPEAATVEIVDPGDESTVFIPLATYSIEEDIGELLIPVRRSGDVSQ
EFMVVCFTQQGTAKGTVPTMVLSYSDYISRPEEHHSVLRFDKGETEKHCRVVVIDDSLYE
PEESFNVTLSMPMGGRLGQEFPTTMVIILPDADDAPVFYFGETEYHVDESDGYVEVRVWR
TGSDLSKTGTVTVRSRKTEPVSAEAGMDYVGISKNLDFSPGVNMQTFKVTILDDLGQPVL
EGPEKFELVLRMPMNGILGEPGKATIYINDSISDLPKVQFRDPTYTGNENDGQISAIVYR
SGDLSYKSSVRCYSRQGSAQVMMDFNERPNTDVSTIVFLPGEVEKPCVLILVDDTEHEED
EELRLVLGSPKSESPFGASIGAQNESLIKIKDDADKAIIRFGATKFSVSEPSESGQISVV
RIPVQRTGDTSKVSVVRVHTKDGSASSGEDYHPISEDLEFKEGETEHIVEVEILYDGVRE
MREAFTVHLKPDENMVAEIQVTKAIIYIEETNSMADVTFPAVPIVVSLLQYDDTSSTRDA
QPVAGYPVVCVTSCNPKYPDFDRTGSICVAEHINNTLTRYRWLVSAPTGPDGVTSPMKEV
DFDTFFTSSKTITLDSVYFQAGSRVQCAARAVNSNGDEGLELTSPIVSISQEDGMCQPRV
VGTVGAEPFSARLRYTGAEDPDHPNLIKLTVTMPHIDGMLPVVSTRPLSNFELTLSPDGT
RVGNHRCSNLLDYTEVRTRYGFITDATRNPDAIGGTAPYQYSTTLRSQNTLRFYRNLHLE
ACLWEFASYYDMSELLNDCGGTIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGAGGWQH
FDLQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINEQGRLVVNFRTEARFRG
LFVTAHSASPMTSMVMCADHPGLTFNLSLVRSEPTYNQPMQQWTFNSDFAVRDYSGTYTV
KLVPCTAPPGVEYSFRPVCHPREPITFDLDIRFQQVSDPVSAEFSLNTQMLLLSKKTLWL
SDGSMGFAQESDTAFSEGDVIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYIPKYNPD
NFEYGCLADSPSLLYRFKIIDKAQPETQARTFGSISFNAFLAVDDPQALPLVRQPGSDGF
RLDSNALFQVSAGREWYIHTIYTVRSRDNANRGIGKRSLDYHSVTHSHSISKRSANRIPD
LAQDIGTENSRGTNILHIALERSAQKHANLHEESQAEGIVPREFNQRDSSDDRFVLIIGI
LVGLLFTILLVILIILVVRSRRDKNMTESPRSSSSTEPMMTQSLYSNNSSEV
NT seq
9339 nt
NT seq
+upstream
nt +downstream
nt
atggctcggagtataacagagcagcggcaacgtagagcgtttcatgtgcacttgtttctc
tttatactgactttgtttcgcgatgcatctgcacagggctttgagagtttgggattaacg
tacggtttaagatctgaactttcagaggatgctattcttgttgccaataatggaatacgg
gttcctttcggaagatctgtttatattgatccaatcaatgacctggttacccaagttcag
cccggagacaagtgcaccataacagttctggataatgacccgctgtcacagagaccggga
cagctgtccccgaaaaagtttccttgtgaatttggtcccaatgatgtaaaatactcgcat
ttcggatccaggagcccttcaaaagacagagtaagacttcagctcagatatgatactcag
actgatacagtcatcattccctttatgatggaagttgaggtgattttcactcagcttgag
attctcaccaaacacatgcctgtagttgtagagaaactgcttggaatgagtaatcctatt
gataagaaaatcctggagtttacttatgatagaaatgctcatttatgtaaagttacatct
ttggccagtggcagctcattacccaggtatggaaaggtgattgataatgggaaattgggg
aaacctgtggactgtgatgaatttgtcaggatggacattcgctatcagcacacttttgca
catcgttctccaaaccgagattatattcccatgtatttagagttacaagacaaagaagca
aatgtactgaagcaagagtttttccaaattgtggtgcttataaaagagggtgaggaaaac
acagctcctaaaccgagttttgtggcaatgatgatgatggaagttgaccagtttgtaatg
actgctataacccacgatatgcttgccgctgaggatgtggaatctaatcctgatgattta
atcttcaacatcacatccccgctgtcctttgaggagggctacattgtgagcacggatgac
aggaatttgcccattacgtctttttatcaaaccgacctgaaagatcttaaaatagcctat
aagcctccttctgtggattcggatgtggagagaattttccaaattgagtttgaagttgta
gacactgagggggctatatcagatccctttgcgtttatgatagtggttaagcctatgaac
actctagcaccggttgtgacccgtaacactggccaactgctttacgagggtcagtcccgg
ccactgtccagctcgcaaaacctacaaattagtgacgaggacaatttagacaatgtccaa
atcacagttattaatggacttcgccatggagagctcacagttttggggtccaggcaaaaa
ttcttcaccccagcagatcttgatgtagggagtgtcatctaccagcatgatggcagcgat
acatacagcgataatatcattttcagaatgacagatggaaaaaatgaagttgagttttta
tttcccattacagtggtgccaactgatgatgaacctcccataatcaatgccaacacaggc
ttagttttgtttaaaaaccaaatgatgccgatttcccctttaatgctgagtgcagcagac
atagactctgaggattcaactattaagttcatcttgttgcctccctactctactattgga
gaagtcatacttcgtcaatcagatgcaccggaggatccatccacatggaggttcaattcc
gaggatgagatgtatgagaaagtagtgacagaatggttccagcaggacatcacagaaggc
aagctgttttacaggcatatcggaccacacaatacaaagaccatcatggatcagtttgtt
ttccgtgtgcaagatgacaacgacccacccaaccaatcaggtgagaactctttcatcatc
aaaattctccccattgatgatatccccccagggctctatcctgggaccactcttcaagtg
accgttcatgagtaccaactcacctatttccgaaagaagttcttgcgctacacagactta
gactcagaagacagggacttgaaatacacaattacccagccacccactgacacagatgag
aacagccctggcattctaggaagcatcgttttaactgagagtccaaactcagaagtcata
gagttcactcaggcacagataaatcatcacaagatagcctacaaacctcctgatctcgag
ctcggaataaccccgcatgtggtgcagttccattacaaagttgaggacacggcgggaaac
agcgccaatggagttttcaccatatttttacagcctgtcgacaacaagcctccccagatc
accaacacaggctttaccattcaagaacgaggggcgcacgtcatcacacgcgccgagctg
gacaccacagatgccgacacggacagctcacagattctgtttacaatcacccagcctcca
aagcacggtcaggttaagtacacattcactgatatgactaaagggaattcattcaatttg
gatgatatatctaatggcagaatatcttacattcataatggtgatgagtcaaccagcgat
ttcttccagctggatgtcagtgacggcatccacgttgtcacaatcacagtcaggatcaac
gtgaagcctattgacgatgaagcaccaaccatcagccttccagagggcactatcggttct
tacatagatgttctggagaatggagtgactgagatcaccaccaacgtcattcagggtcga
gacgaggacactgatgacctcaggctgacctttattgtagacgatcccccagtgtttggt
gaaatattagtgaatggtgtgccctccaataggttcactcaagcaaacatcattagtggc
ttggtagtatatgcacataatagcggagagattggcttgacaacaaaacacgacttcttt
aatcttacgcttaccgatatgtctgatgaatggacagttgggggaaataaaatcaaaggg
gttcgtgtgcaggtcaccattttgccgttggacagtcaggcccctgaggtctttgttggt
ccccaattcattgtcatagagggtgaaaaaaatgttattgacatttcgcatattagtgct
aatgacattgacacccctaatgatgacctactttgcacaattattgtgcagcccacctca
ggctacgtagaaaatatctcccctgcaccaggctctgaaaaatccagatctgggattgcc
attagtgctttcacgattaaagacattcgggaaaaccacatttattacgtgcaaagtatt
cataaaggtgtcgagccagttgaggacaggtttactttcaggtgttcagatgggataaac
ttttccgagaggcactttttcccagtcgtgataatcccatccaatgacgaaaagccagag
atccatatgagagagtttgttgtgatggaaggcatgaacattgtgattgacactccaata
ttaaacggcgctgatgctgatgttccatcggatgagctcacgtttatcatttcaaaacct
ccgaaatatggatatatcctcaatcagttaacctcaggcactattccagtcacaaacttc
actcttgatcagatacgagaggcttcaagtattgtctacgagcatgatgattcagaaacc
acagaggataggtttgatgttctacttactgatggcaaattcacagtggagaaaaccgtc
atgattatggtcattttggttgacgatgaaacaccaaggatggcgattaatgatggcctt
gaaatagaagtaggagaggtgaaaataatcaacaataaagttttaaaagccaccgatctg
gatacagaagacagcattctgacctacatcatccgttatggtccaaatcaagggttttta
caaaagcgaacaccatttggaacatttgaaaacataactgttggaatgaacttcacacaa
aatgaaatcgaccaagatatgatcatgtacattcacaatggacaagagggagttcgtgac
cttatcaaatttgatgtcactgatggcattaaccctttgattgacagatacttctatgta
actgtgggtggaatagacatggtgttccctgatgtgattagcaaaggtgtttcactgaaa
gaaggaggaagggtcactctaaccacagacctgctcagcactagtgatcataacagtcct
gatgaacatttggtgttcaccatcacacgtgcccctatacgaggacacttagagtgcact
gatgcgccaggcatgcccattagtttgttcactcagcttcaactagcggggaataaaatc
tactacatccacactgctgatgatgaggtaaagatggacagctttgagtttgaagtgacc
gatggttacaatcctgtgttccgcaccttccgtgtgtccattacggatgtggacaacaaa
aagcctgtggtcaccattcacggactggtcgttaatgaaggtgaaaataagttaatcact
ccttttgagttgacagtggaggaccgtgatacagtcgatcaccttttaaagtttacaatc
acccaggttcctgtacatggcaagttgctgtttaacaacacccgtcctgtcacttccttc
accaagcaggacctgaatgaaaacatgatacgttataaacacgatggaactgagtctgcc
tccgacagcttctcatttactgttactgatggaactcacacagacttttatgtgttccct
gacacggtttatacgactcgcaaaccccagatgatgaaaataacaatttacccagtggac
aatggagttccacaggttgtgactaataagggtggtacaacattaaggattctccctact
ggtcaccttgggttcctgatcactagtaaaacactaaaggcagaggacagagacagcctt
catggagcagtgacttttaaaataactgtggccgctgagcatggctacctcattgacttg
gggaaaggcaatgccactatcaccacattcacccaagctgacatcaatgacatgcatata
tgctatgtgcttcgagacggagacaatgccacaagcgacacattccacttttccatcgaa
gacagtgggggcaacaagctgaaaaaccaaaatttccgactaaactgggcttggatctcc
ctggacaaagagtactaccaggtagatgaggagagcaagtttctggaggtggtcttgaga
cgcagaggttaccttggcgagacttcatttgttagtattggtaccaaagatggtacagct
gaaaaggacaaagatttcagagggaaagcccagaaacaagtccagtttaacccgggtcag
accactgctacctggaaagtgcgcatcttgtcagacagcctatacgagcaggccgagacc
ttccagattgtcctgtcagagcctgtcatgggagcactggagttcccagaggctgcaacc
gtggaaattgttgaccctggagatgaatccacagtgttcatcccattggctacatactcg
attgaggaagatattggtgaacttctgattcctgtgcgaagatctggagatgtcagtcaa
gagttcatggttgtctgcttcacacaacaaggtacagccaagggcacggttcccaccatg
gtgctttcctattctgactacatttctcgacccgaggaacaccacagcgtgctgcgtttc
gataagggtgagacggagaagcactgccgtgtggtcgtcatcgatgactcactctacgag
ccagaggaaagctttaatgtcaccctcagcatgcccatgggcggccgtctgggtcaggag
ttccccaccaccatggtcatcatcctgcctgatgcggatgacgcgccagtgttttacttt
ggagaaactgagtaccatgtggatgagagtgatggttatgtcgaagtccgtgtttggaga
acaggaagtgacctttccaaaactggaactgtcacagtacggtctcgaaaaactgagcct
gtttcagccgaagctggtatggactacgttgggattagtaagaacctagacttttccccg
ggcgtcaacatgcagacgttcaaggttacaatcctggatgacctgggacagccggtgctg
gaggggccagagaagtttgagctggttctccgtatgccaatgaacggcatattgggtgaa
ccaggaaaagctacaatctacatcaatgactccatctcagatttgcccaaggtgcagttc
cgagatcctacgtacacgggtaatgagaatgatggacagatatctgctattgtgtaccgg
agtggagatttgagctacaagtccagtgtgcggtgctacagccgtcaaggttcggcccaa
gtcatgatggacttcaacgagaggccaaacacagacgtttccaccattgtctttttacca
ggagaggtggagaagccttgtgtcctcatcctcgtggatgacaccgaacatgaggaagat
gaggaactgagattggtgctgggaagccccaagagcgagtctccatttggggcctccata
ggggctcagaatgagtcactcatcaagataaaggacgatgctgacaaggccattatcagg
tttggagcaaccaagtttagtgtgagtgaacccagtgaatcagggcaaatctcagtggtg
aggatcccggtccagaggacaggagatacatccaaagtgtctgtggttcgggtccacaca
aaggatggttcggcttcctctggagaagattaccatcccatctctgaagatttggagttt
aaagaaggagagactgagcacatcgtggaggtggaaattctgtatgatggtgtacgagag
atgagagaggccttcactgtccacctcaaacctgatgagaacatggtagcagagattcag
gtcaccaaagccatcatctacattgaagagacaaacagtatggccgatgtgaccttcccc
gcggtgccaatagtagtgtctctgttgcagtacgatgatacaagcagcactagagatgct
cagccagttgcaggatatcctgtagtctgcgtcacgtcgtgcaaccccaagtatcctgac
tttgaccggacgggctccatctgtgttgctgagcacatcaataacaccctgacccggtac
cgctggctggtcagtgccccgacaggacctgacggtgtgaccagccccatgaaggaagtg
gattttgacacattcttcacctcctccaaaacgatcacattagactcagtgtatttccag
gcaggctcgcgtgtgcagtgtgcagcccgggctgtcaactccaatggggatgaaggcctg
gagctcaccagccccatagtttccatcagccaggaagatggtatgtgccagcctcgggtt
gttggcacagttggagctgagcctttttctgccaggctgcgctacactggagcagaggat
ccagaccacccaaacctcattaaactgactgttaccatgccccatattgatggaatgtta
cctgtagtctccactcggccgctctccaactttgagctaaccctgagtccagacggcact
cgtgtaggaaaccatcgctgctctaacctgctggactacacagaggtgcggacacgctac
ggcttcatcacagatgccacgcgcaatccagatgccatcggcgggactgcgccctaccag
tacagcacaactctcaggagccaaaacaccctacgattctaccgaaacctgcacctggag
gcctgcttgtgggagtttgccagctactatgacatgtctgaactgctcaatgattgcgga
gggaccatcgggactgatggacaggtgctgaacctggtgcagtcttacgtgaccctgcgt
gtgcccctgcatgtgtcatacgtcttccattcgcccgtcggcgctggtggttggcagcac
tttgacctgcagtctgagctgcgtctcacttttgtttacgatactgccatcttgtggaga
gatggcattggtagtccaccggaagctgaattacaaggtgccctctatcctacaagcatg
cgcatcaatgaacaaggccgtttggtcgtcaacttccgtacagaagcacgttttcgggga
ctgtttgtcactgcacattcagcctcccccatgacttccatggttatgtgtgcggaccat
cctggactgacctttaaccttagcttggtgagaagtgagccgacatacaaccagccgatg
cagcagtggaccttcaactctgactttgctgtgagggattactcaggaacgtacacggtg
aaactggttccctgcacagctcctcctggtgttgagtacagcttccgccctgtgtgccac
cccagagagccaattacctttgatctggacatacgcttccaacaggtgagtgatccagtg
tccgcagagttcagtcttaacacacaaatgctgctgctttcaaagaagactctctggttg
tcagacggctccatgggctttgctcaggagagtgatacggctttctcagagggagatgtc
atctacggccgtgtaatggtggatcccgttcagaatcttggagactcgttcatctgtaac
attgaaaaggtgttcctgtgcacaggggcggatggatacatcccaaaatacaaccctgac
aactttgagtacggctgcctagctgattcaccgtctcttttgtaccgatttaagatcatt
gacaaagctcagccagaaactcaggcgagaacatttggcagcattagtttcaatgctttc
ctcgctgtagacgatcctcaggcgctgccgctggtgaggcagccgggctctgacggcttc
aggttggattcgaatgctttgtttcaggtgtcggcaggcagggagtggtacattcacacc
atctacaccgtccggtccagagacaacgctaaccgaggtatcgggaaaagaagccttgac
tatcattctgtgacacacagccactcgatttccaaaaggtcagccaaccgcattccagat
ttggctcaggatattggcacagaaaatagccgtggcacaaacatcttacacatagcgctg
gaacgcagcgctcaaaaacatgccaaccttcatgaggaatcccaggcggagggtatcgtt
cctagagaatttaatcaaagagactctagtgacgaccgatttgtcttgatcataggaatc
ttggtaggtctactcttcaccatcctcctcgtcattctcatcattctggtggtgcgatct
agacgggacaagaacatgactgagtccccgagaagctccagcagcacagagcccatgatg
acgcaaagcctctatagcaacaacagctcagaggtttga
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integrated database retrieval system
