Onychostoma macrolepis: 131554251
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Entry
131554251 CDS
T09350
Symbol
cldnf
Name
(RefSeq) claudin f isoform X1
KO
K06087
claudin
Organism
omc
Onychostoma macrolepis
Pathway
omc03272
Virion - Hepatitis viruses
omc04382
Cornified envelope formation
omc04514
Cell adhesion molecules
omc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
131554251 (cldnf)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
131554251 (cldnf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
131554251 (cldnf)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
131554251 (cldnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omc03037
]
131554251 (cldnf)
04147 Exosome [BR:
omc04147
]
131554251 (cldnf)
04515 Cell adhesion molecules [BR:
omc04515
]
131554251 (cldnf)
Cilium and associated proteins [BR:
omc03037
]
Other cilia and associated proteins
Stereociliary proteins
131554251 (cldnf)
Exosome [BR:
omc04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
131554251 (cldnf)
Exosomal proteins of colorectal cancer cells
131554251 (cldnf)
Cell adhesion molecules [BR:
omc04515
]
Immunoglobulin superfamily
L1 family
131554251 (cldnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF3810
MFS_MOT1
DUF1129
Motif
Other DBs
NCBI-GeneID:
131554251
NCBI-ProteinID:
XP_058655429
LinkDB
All DBs
Position
15:complement(2906595..2914889)
Genome browser
AA seq
409 aa
AA seq
DB search
MVSMCRQILGLSLAIIGFLGAIIVCALPMWKITAFIGANIVTAQIVWEGLWMNCVVQSTG
QMQCKIYDSLLALPQDLQAARAPLIVAIIVCLFGVVLGIAGGKCTNFVEREDTKAKVAIA
SGVIFIVAGVLVLVPVCWSANTIVRDFYNPLLTDGQRRDSFNMGRIAKEVSGQVLCFIGF
IGICVSCGMPMWRVTSYIGANIVTGQIVWDGLWMNCVMQSTGQMQCKVQDSIMRLTQDLQ
AARALTVIAIVIGFIGMLLTFVGGQCSSCLKKESSMAKVLILGGILCIVAGVLCLIPVCW
SSAYTISDFQSVLTIETQKRELGASIYIGWGASGFLLFGGIILCTSCPPREDMYPKYPAM
YPYQGPMYGPPGSYMPAKTYAPSAVYTGAYLPNKPYPAPTYSPVPRQYL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctatgtgtcgacagattctaggcctgtccctggccattattggtttcttggga
gcgattattgtttgcgcccttcccatgtggaagattactgcattcattggagccaacatc
gtgacagcacagatcgtctgggagggcttgtggatgaactgtgtggtccagagcacagga
cagatgcagtgcaaaatctacgactcgctcctggctttacctcaggacctgcaggctgct
cgggcgcctctgatcgtcgccatcattgtctgcctctttggggtcgtcctggggattgcc
ggtggaaaatgcaccaactttgttgagagagaagacaccaaggcaaaggtggctatcgcc
agtggtgtgatcttcatcgtcgctggagtgctggtcctggtccccgtctgttggtcagca
aacaccatcgtcagggatttttacaatcccctcctcacagatggccaaaggagggacagc
ttcaacatggggaggattgctaaagaggtttccggccaggtcctgtgcttcattggattc
attggcatatgtgtcagctgtggcatgcccatgtggcgcgtcacttcgtacatcggtgcc
aacatcgtcacgggccagatcgtctgggacggcttgtggatgaactgtgtgatgcagagc
acaggacagatgcagtgtaaagtccaagactcaatcatgagactgacgcaggacttgcaa
gcggcacgtgcgctgaccgtcatcgcaatagtgatcggcttcattgggatgctcttgacg
tttgtgggaggccagtgcagcagctgtctgaagaaagagtcctccatggctaaagtgctg
attctgggtgggatcctgtgcattgtagctggagtcctctgtctcattccagtctgctgg
tcctcagcctacaccatctcagatttccagagtgttctcacaatcgagacccaaaagagg
gagcttggggcatccatttacatcggctggggcgcctcagggtttcttctgtttggaggg
atcattttgtgtacttcttgcccaccgagagaagatatgtatccaaaatacccagccatg
tacccctaccaaggacctatgtatgggcctcctggatcttatatgcctgccaaaacatat
gcaccgagtgctgtatatactggagcttatcttcctaacaaaccatatccagccccaact
tactcacctgttccgagacaatatctttag
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