Onychostoma macrolepis: 131554362
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Entry
131554362 CDS
T09350
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
omc
Onychostoma macrolepis
Pathway
omc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131554362 (supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omc03021
]
131554362 (supt5h)
03019 Messenger RNA biogenesis [BR:
omc03019
]
131554362 (supt5h)
Transcription machinery [BR:
omc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
131554362 (supt5h)
RNA polymerase I system
131554362 (supt5h)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
131554362 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
KOW7_SPT5
KOW5_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
DUF150_C
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
131554362
NCBI-ProteinID:
XP_058655650
LinkDB
All DBs
Position
15:14031997..14049393
Genome browser
AA seq
1080 aa
AA seq
DB search
MSDSDDSDFSDNQSERSSEAEEVEENEDEEQGSVAGSDKEAEEEGEDLEDEEEYDEEEEE
DDDRPRKKPRHGGFILDEADVDDEYEDEDPWEDGAEDILEKEEAEVSNIDHVVLDEDHSG
SRRLQNLWRDSREEALGEYYMRKYAKSSGGEHFYGGSEDLSDDITQQQLLPGVKDPNLWT
VKCKIGEERATAIALMRKFIAYQCTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKSAIEG
VGNLRMGFWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEPSQN
TISLKMIPRIDLDRIKARMSMKDWFAKRKKFKRPAQRLFDAEKIRSLGGEVSHDGDFMIF
EGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTETTGKEREHNLQ
AGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVKVI
AGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELVQ
LDPQTVGVIVRLERETFQVLNMHGKVLTVRHQAVNRRKDNRFAVALDSEQNNIHVKDIVK
VIDGPHSGREGEIRHIFRGFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNFTVGG
FAPMSPRISSPMHPGGGGQQHRGGGGGMGRGRGRRDNDLIGQTVRISQGPYKGYIGVVKD
ATESTARVELHSTCQTISVDRQRLTTVGGKERQGRTSTHLRTPMYGSQTPIYGTGSRTPM
YGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPNNPNTPSRPDDEYEFAYDDEPSP
SPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTDQYSPYAAPSPQGSYQPSP
SPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPH
TPGSNIDQASNDWVTTDIMVRVKDTFLDGGVINQTGVIRSVTGGMCSVFLQDTEKVVSIS
SEHLEPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMELDEQLKILNLRFLGKLEV
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcgatgacagtgatttctctgataatcagagcgagaggagcagcgaggct
gaggaggtggaggagaacgaggatgaggaacaggggagtgtagctggcagtgacaaggag
gctgaggaggagggagaagatttggaggatgaggaggagtatgatgaagaggaagaagag
gatgatgaccggcccaggaaaaaacctcggcatgggggcttcatcttggatgaagccgat
gttgatgatgagtatgaagatgaagatccatgggaggatggtgctgaagacatcttagaa
aaagaagaggccgaagtgtccaacattgaccatgtagttttggatgaggatcactctggt
tcaaggaggttgcagaatctctggagggattcacgtgaggaagctctgggggagtattac
atgagaaaatatgccaagtcctcaggtggagagcatttctatggcggctctgaggatctt
tctgatgacatcacccagcagcagttgcttcctggggtcaaggatcctaatttgtggacc
gttaagtgtaagatcggagaggagagagcaactgccattgccttgatgcggaaatttatt
gcttatcagtgcaccgacacgccgcttcaaatcaaatcagtggtggcccctgagcacgtc
aaaggttatatctatgtggaggcgtacaagcagacccatgtcaagtccgccattgagggt
gttggaaacctgcgtatgggcttctggaaccagcagatggtgcccattaaagagatgaca
gatgtgctgaaggtggttaaggaagtgactaaccttaaacccaagtcttgggttcgtctt
aagagaggcctttataaagatgacattgcccaggtggactatgttgaaccgagccagaat
acgatctccctgaaaatgattcctcgtattgatctagatcgcatcaaagcgaggatgagt
atgaaagactggtttgcaaagagaaagaagtttaagaggcccgctcagaggctttttgat
gctgaaaagatcaggtcacttggtggggaggtcagccatgatggtgacttcatgatattt
gaaggcaaccgatacagccgcaaaggcttcctgttcaaaagctttgccatgtcagctgtg
atcactgaaggggtcaaacccacactatcagagctggagaagtttgaggaccagccagag
gggattgaccttgaagtagtcacagagacaacaggtaaggagcgtgagcacaatctccag
gcaggagataatgtggaagtgtgtgagggggagctgatcaaccttcagggtaaaatcctg
agtgtggatggcaacaagatcaccattatgcccaagcatgaagatctcaaggaccctctt
gagtttccagctcatgagttgaggaagtacttccgtatgggcgaccacgtgaaggttatt
gcaggacgttttgaaggtgatacaggccttatagttcgtgtggaggagaactttgtcatt
ttgttctctgatctcaccatgcatgagttgaaagtcttgccccgggacctgcagctgtgc
tctgagaccgcctcaggtgtggatgcaggaggccagcatgagtggggagagctggtacaa
ttagacccccaaactgtaggtgtcattgtcaggctggaaagagagaccttccaggttctg
aacatgcacgggaaagttttgactgtacggcaccaggcagtgaatagacggaaggacaac
cgctttgctgtcgctctcgactctgagcaaaacaacatccatgtgaaggatattgtgaaa
gtcattgatggacctcattcgggccgtgaaggtgaaattcgccacatcttcagaggtttt
gcatttcttcactgcaagaagctggttgaaaacggaggcatgtttgtttgtaaagcacgc
cacctcgttctggcaggcggctcaaagcccagagatgtgaccaattttacagtgggaggc
tttgcacctatgagtccacgcatcagcagcccaatgcaccccggcggaggtggtcagcag
cacaggggcggaggtggtggcatgggtcggggccgtgggcgacgagacaatgatctgatt
gggcagactgttcgtatatcccagggaccatacaaaggctatattggagtggtgaaggat
gccacagaatcaaccgcaagggtagagctccactcaacttgccagaccatctctgtggac
cgtcagcgtcttacaactgttggcggcaaagaaagacaaggaaggacttccacccattta
cgaacccctatgtacggctcccagacacccatttatggaactggctcacgtacccccatg
tatggtagccagacacccctccatgatggaagccgtactcctcactatggctcccagact
cctctgcatgatgggagcagaacgccaggtcagagcggcgcttgggaccccaacaatcca
aacacaccatcacggcctgatgacgaatacgagttcgcctatgacgacgagccctcgccg
tctcctcaaggctatggcggtacgcccaaccctcagactcctggctacccagaagtgccc
tccccgcaggtcaaccctcagtacaatcctcagactcctgggactcctgccatgtacaac
accgaccagtactccccgtatgcagctccctctccacaagggtcctaccagcccagcccc
agcccacagagttatcaccaagtggccccaagcccagtgggataccaaaacacacactcg
cccgccagttaccaccccaccccgtcacccatggcctaccaggccagtccgagtcccagt
ccggtagggtacagtccaatgactcctggagctccatctccgggaggctacaaccctcac
acccccggatctaacatcgaccaggcctccaatgactgggtcaccacagacatcatggtg
cgtgtgaaagacacattcctggatggaggcgtcatcaatcagaccggtgtcatccggagt
gtcaccggggggatgtgctccgttttcctgcaagacacggagaaggtcgttagtatttca
agtgaacatttggaacctgttacgccaaccaaaaacaacaaggtgaaggtgattctggga
gaggacagggaggccacaggagtcctgctcagtattgatggtgaagacgggattgttaga
atggagctggatgagcaactgaagattctcaatctccgcttccttgggaaattggaagtg
tga
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