Oleiphilus messinensis: OLMES_0339
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Entry
OLMES_0339 CDS
T04860
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ome
Oleiphilus messinensis
Pathway
ome03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OLMES_0339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ome03400
]
OLMES_0339
Enzymes [BR:
ome01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OLMES_0339
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OLMES_0339
DNA repair and recombination proteins [BR:
ome03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OLMES_0339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ARU54445
UniProt:
A0A1Y0I4J4
LinkDB
All DBs
Position
complement(378222..379034)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTKRGIAPHILSKSVTDVCIRQPKLRWPIPDDLAERLNQARLLNIHRRAKYL
LLQFDPGWLLIHLGMSGSLRIVDPNQLPEKHDHVDIHFANTVLRFRDPRRFGAVLWLGDT
PEDSPLLSKLGPEPLAEAFNGDYLYARSRGKTATVKQFIMDQAVVTGIGNIYATEALFLS
GIKPTRAAGQISRERYQKLSQNAKSILEKAIDQGGTTLKDFVGSDGKPGYFKQELLAYGR
KGLPCVTCETELTEVRLGNRSTVYCKRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaattacccgaagtagaaaccacgaaacggggcattgccccccacattttgtcg
aaaagtgtaaccgacgtgtgtattcgccagcccaagcttcgctggcctatcccggatgac
cttgccgagaggttaaatcaagcccgactactaaatatccaccgtcgcgccaaatacctc
ttactgcagtttgatccgggctggttgcttatccatctcggaatgtctggcagtttgcgc
attgtagacccgaatcaactccccgaaaaacatgatcatgttgatatccattttgccaac
actgttttgcgttttcgcgacccccgccgtttcggtgcagttttgtggcttggggatacc
ccggaagacagccctctcctgagcaaactcggcccggaacctctggcagaggcattcaat
ggtgattatctctatgcacgatcacgaggtaaaaccgcaacggtcaagcagttcatcatg
gatcaagctgtagtcaccggcattggtaacatctatgcgactgaagccttattcctgtcc
ggcatcaagcccactcgcgcagcaggccaaatatcccgtgaacgctatcaaaaactgagc
caaaacgccaaatcaatccttgaaaaggcgatcgatcaaggcggcacgacactgaaggac
tttgtcggtagcgatggtaaaccgggttacttcaaacaagagttacttgcctacgggcga
aaagggctgccttgtgtaacctgcgaaaccgaattgactgaagtgcgcctcggaaaccgc
agcaccgtctattgcaagcgatgtcagcgctga
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