Oleiphilus messinensis: OLMES_0680
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Entry
OLMES_0680 CDS
T04860
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ome
Oleiphilus messinensis
Pathway
ome03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OLMES_0680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ome03021
]
OLMES_0680
03400 DNA repair and recombination proteins [BR:
ome03400
]
OLMES_0680
Enzymes [BR:
ome01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OLMES_0680
Transcription machinery [BR:
ome03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OLMES_0680
DNA repair and recombination proteins [BR:
ome03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OLMES_0680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ARU54772
UniProt:
A0A1Y0I2T0
LinkDB
All DBs
Position
737259..741470
Genome browser
AA seq
1403 aa
AA seq
DB search
MKDLLNLLKSQNNKQEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVALANVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESFIVIDPGMTTLTRGQLLSDEQYYEALEEFGDEFDAKM
GAEAVQALLADIDLDEEIARLREEIPATNSETKIKKLSKRLKLCEAFAGSGNKPEWMIFE
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELSAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPS
LRLHQCGLPKKMALELFKPFIFSKLEHRGLATTIKAAKKMVERETAEVWDILAEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAINLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNVLSPANGEPIIVPSQDVVLGLYYMTREKINARGEGMVFSDVAEVHRAFGAK
KVHLQAKVKVRIKQWEALESGEFESRYELVDTTVGRSLLFDILPKGLPFELVNQAMTKKA
ISRLINRSYRQCGLKDTVIFADQLMYLGFSQATMSGSSIGVNDFVIPDSKKPIIDAAENE
VKEIESQFATGLLTQGEKYNKVIDIWSRANDKVAKAMMETLGKEMVVNRDGDEVAQDSFN
SVYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTDFDCGTEEGLLTTPLIEGGDVVVPLGDRVL
GRVTAKDVFAPGNDVDAVFPAGTFLDEAAVAGLESAGVDEVWVRSTITCNTRYGVCSKCY
GRDLARGHLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRASAVDNIQVKHGGTVR
LHNMKFIERNDGQLVVVSRSSAMAIADEHGREREWYKLPYGALLSVKNGEKVEAGQIVAK
WDPHTHPIVTEMEGRVLFVGMEEGITINTQTDELTGLSSIVVLDPKDRPAAGKDLRPLIQ
LVDENGNEVKIPNTDANAQYFLPANALLGLKNGDQINKGDIIARIPQESSKTRDITGGLP
RVADLFEARKPKEPSILAEVSGTVSFGKETKGKKRLVVSPTDGTDPVETLIPKWRQLNVF
EGEQVERGEVVSDGPSNPHDILRLLGVGELAKYIINEIQDVYRLQGVVINDKHIEVIVRQ
MLRKVDVMDSGDTPLIKGDQVEYFKMLEENDLADEKGMMPSRCERVLLGITKASLATESF
ISAASFQETTRVLTEGAVTGKQDFLRGLKENVVVGRLIPAGTGLAYHSERKRRRNKSAVP
ESAGVSAAEVVEALSAELNKEQD
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttattaaatttactcaagagccaaaacaacaaacaagagtttgatgccatc
cgaatcggtctggcctcaccagaaatgattcgctcttggtcatttggtgaagttaagaag
ccagagacgatcaactatcgaacgtttaagccagagcgtgatggcttgttctgtgccaag
atttttggtccgatcaaagattacgagtgcttgtgtggaaagtacaaacgtctcaagcat
cgtggtgttatttgtgagaagtgtggtgtagaagttgcgcttgcgaatgtgcgtcgtgag
cgaatggggcatatcgagctcgcgagtcctgtagcgcatatttggtttttgaaatcactg
ccgtctagaattggcttgctgttggatatgacgctcagagatattgagcgtgtgctttat
ttcgagtcctttattgtaattgatccaggtatgactacgctcactcgaggtcagttgctg
agtgatgagcaatattacgaagcacttgaagagtttggcgatgagttcgatgcaaaaatg
ggtgcggaagctgttcaggccctgcttgcagatattgatctggatgaagagatcgctcgt
cttcgcgaagagattccggcgacaaactcagaaactaagatcaagaagctgtcaaaacgt
ctgaagctgtgtgaggcctttgctggatccggtaataagccggagtggatgatcttcgag
gttctcccggttcttccgcctgatttgcggcctttggtgccgttggatggtggtcgattc
gctacgtcggatctgaatgatttgtatcgacgggtaatcaaccgaaataatcgcttgaag
cgtctgctggaattgagtgcgccggatataattgtgcgcaacgaaaagcgtatgctacaa
gagtcagttgacgcattgcttgacaatggtcgtcgcgggcgcgcaatcacgggctccaac
aagcgtccattgaagtccctggcagatatgatcaagggtaagcagggtcgtttccgtcaa
aaccttttgggtaagcgagttgattattctggtcgttccgtaatcgttgtcggcccgagc
ctgagattgcatcagtgtggtttgccgaaaaagatggcgcttgagttattcaagccgttt
atttttagcaagctagagcaccgtggtttagctacaacgatcaaagcagccaaaaaaatg
gttgagcgtgaaactgccgaagtttgggatattctggcggaagtaattcgtgagcatccg
gttatgctcaaccgtgcaccaacacttcaccgtttgggaattcaggcttttgagccagtc
ctgatcgagggtaaagcgatcaatttgcaccctctggtttgtgcggcttacaacgccgat
ttcgatggcgaccagatggcggtacacgtaccgctcactctggaggctcagttggaagct
cgtgcgctgatgatgtctacaaacaatgtgttgtctcctgctaatggtgaacctatcatt
gtgccgtctcaagatgtggtcttgggtttgtactacatgactcgggagaaaattaacgcc
cgtggtgaaggcatggtgttctctgatgttgccgaagtgcaccgtgctttcggtgcaaaa
aaagtgcatctccaggctaaggttaaagttcgaataaagcagtgggaagcgctggaatcc
ggcgagttcgagtcacgctacgagctggttgatacaactgttggtcgttctttgcttttt
gatatcttacctaaggggctgccttttgagttggtcaaccaggcaatgacgaaaaaggct
atatcccgattgattaaccgttcgtatcgccagtgcggcctgaaagatacggttattttt
gcggatcaactgatgtatctcgggttttcccaagcgacgatgtccggttcttcgattggt
gtaaacgattttgttattcccgattcgaagaagccgatcatcgatgccgccgagaatgaa
gtaaaagagattgagtctcagtttgccacgggcttgttgacccagggtgagaagtacaac
aaggttattgatatctggtcccgagcgaatgataaagtcgcaaaagcgatgatggaaacg
ctgggtaaagagatggttgtcaatcgtgatggtgatgaggttgcacaggactcgttcaac
tcggtttatatgatggcggattcaggggcgcggggttctgcggctcagattcgtcagtta
gcggggatgcgcggattgatggccaagccggatggctcgatcatcgaaacacccattact
gcgaacttccgggaaggtttgaacgtactccagtactttatttcaactcacggtgctcgt
aaaggtcttgcggataccgctctgaaaacagctaactcaggatatttgacgcgtcgactg
gtcgatgtcgctcaggatcttgttgtaaccgattttgactgtggtactgaagaaggtctg
ttgaccacgccattgattgaaggcggagacgttgttgtgccgttgggcgatcgtgttctc
gggcgtgtaacggcaaaagatgtttttgctccgggtaatgatgttgatgcagtgtttccc
gcgggtacatttttggacgaggccgcagtagccggtctggagagtgctggggttgatgaa
gtttgggttcgttcgacgattacctgtaatacgcgctatggtgtgtgttccaagtgttat
ggacgagatctggcacgtggtcacctcgttaatgtcggtgaggctgttggtgttatcgca
gcacaatcgattggtgagccaggcacccagctgaccatgcgtacgttccacatcggtggt
gcagcttccagagcctctgcagtcgataatattcaggttaagcacggcggtaccgttcgt
ttgcataacatgaagtttattgagcgtaatgacgggcaattggtggttgtgtcccgttct
tctgcaatggctatcgcggatgagcatggtcgtgagcgtgagtggtacaagttgccttac
ggtgctttgctgagcgtcaaaaacggcgaaaaagtggaagccgggcaaattgtagctaag
tgggatccacatactcacccgattgttaccgaaatggaaggtcgtgtactatttgtcggg
atggaagagggtataacaattaatacccaaactgacgagctcaccgggttgtcgagtatc
gttgttcttgatccaaaagatcgacctgcggccggtaaagatctgcgtccattgattcag
ttggttgatgaaaatggaaatgaggtgaagatccctaacacggatgctaatgcacaatac
ttcctccctgctaacgcattgctggggcttaagaatggcgatcagattaacaagggtgac
attattgccaggattcctcaggaatcatctaaaacccgtgatatcaccggtggtttgcct
cgggtagctgatttgtttgaggcgcgtaagccaaaagagccttcaatacttgctgaagtg
tctggtacggttagcttcggtaaagaaaccaagggcaagaagcgtcttgttgtttcgcca
acagacggtactgatccggtagaaacgttaataccgaaatggcgtcaattgaatgtgttc
gaaggtgagcaagtagagcgcggtgaggttgtttcagacggcccgtctaacccccatgac
attttacgtcttttaggggttggtgagctggcgaagtacatcattaatgaaattcaagat
gtttatcgtctgcaaggggttgtcataaatgataaacacatcgaagttatagtgcggcaa
atgttgcgtaaagttgatgtgatggattcgggggatactcctctgatcaagggagatcag
gttgagtacttcaaaatgcttgaggaaaacgatctcgcggatgagaaaggcatgatgccg
tctcgctgtgagcgtgtcctgttagggattaccaaagcgtcattggcgactgaatcgttt
atctcggcggcatctttccaagaaactactcgtgtactcacagagggtgcagttacaggc
aagcaagacttcctgagaggcttgaaggaaaacgttgtcgtgggtcgtttgattccggca
ggtaccggcttagcctatcacagtgagcgtaaacgtcgtcgtaataagtctgctgtgccg
gaaagtgcaggtgttagtgccgctgaagtcgttgaagcgctcagtgcagaattgaacaaa
gagcaagattaa
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