Oleiphilus messinensis: OLMES_0890
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Entry
OLMES_0890 CDS
T04860
Symbol
tcdA
Name
(GenBank) ATP-dependent tRNA threonylcarbamoyladenosine dehydratase/tRNA(ANN) ct(6)A37 cyclic threonylcarbamoyladenosine biosynthesis enzyme
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
ome
Oleiphilus messinensis
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ome03016
]
OLMES_0890 (tcdA)
Transfer RNA biogenesis [BR:
ome03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
OLMES_0890 (tcdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
NAD_binding_7
Sacchrp_dh_NADP
Pyr_redox_2
UDPG_MGDP_dh_N
ApbA
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
ARU54977
UniProt:
A0A1Y0I3D7
LinkDB
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Position
complement(972690..973526)
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AA seq
278 aa
AA seq
DB search
MMTTIPPTSEIPDSSGHDLDYRFGGIRRLYGQAAYDRFQNAHVCIVGIGGVGSWAAEALA
RSAIGHLTLIDLDDICVSNINRQIHALDGHIGQLKVEAMAERIRRINPHCQVNARVSFLT
EKNLAELINDEFDYVLDAIDSVKMKTRLIAHCKRQKIPIVCAGGAGGQTDPTQIQMADLG
RTYQDPLLAKVRSQLRKNYGFSSNPKRKLGIDCVFSTEQLTYPKADGEVCQQKPENNGPV
RLDCASGFGAVTHITATFGFFAVSRVLQKIAARGVKTT
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaccataccaccaacttccgaaataccagactcatctggacatgaccttgat
tatcgcttcggcggcatacgcagactctacggtcaagccgcatatgaccgcttccagaac
gcgcatgtttgcatcgtcggtatcggcggtgttggctcatgggcagcagaagccctggca
cgcagtgcaatcggccacctgacactcattgatcttgatgacatctgcgtatccaatatt
aatcggcaaattcacgcactcgatggtcatattggacaattgaaagtcgaggcaatggca
gagcgaattcggcggatcaacccacactgccaggtgaatgcccgggtatcctttcttacg
gagaaaaacctggccgagcttatcaacgatgaattcgattatgttttagatgcaatagac
agcgtcaaaatgaaaacccgtctcattgcccattgcaaacgacagaaaatcccgattgtt
tgcgccggcggcgcgggcggccagacagatccgacacaaattcagatggccgatctcggc
aggacgtatcaagaccctcttctggccaaagtccggagtcaactgcgaaaaaactacggt
ttctcctcaaacccgaagcgaaagctgggaatagattgcgtattttcaacagaacagcta
acttaccccaaggcggatggcgaggtatgccagcaaaaaccggagaacaatggtccggtt
cgactggattgtgcaagcggctttggcgcagtgacccacattacagccactttcggcttc
tttgcggtatctcgggttttacaaaaaatagcagcccgtggcgtaaaaacgacttaa
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