Oleiphilus messinensis: OLMES_2214
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Entry
OLMES_2214 CDS
T04860
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ome
Oleiphilus messinensis
Pathway
ome03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OLMES_2214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ome03019
]
OLMES_2214
03009 Ribosome biogenesis [BR:
ome03009
]
OLMES_2214
Enzymes [BR:
ome01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
OLMES_2214
Messenger RNA biogenesis [BR:
ome03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OLMES_2214
Ribosome biogenesis [BR:
ome03009
]
Prokaryotic type
rRNA processing factors
OLMES_2214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ARU56281
UniProt:
A0A1Y0I763
LinkDB
All DBs
Position
complement(2481656..2485060)
Genome browser
AA seq
1134 aa
AA seq
DB search
MLINATHEEELRVALVDGQKLYDLDIESGTSQTKKANIYKGKITRIEPSLEAAFVDYGAE
RHGFLPLKEISKEYFTTPPSQINGKINIKDVVTEGQEIIIQVDKEERGNKGAALTTFISL
AGRYLVLMPNNPRAGGISRRIEGEDRTQLKEAMSGLKTPKNMGVIVRTAGVGRSTEELQW
DLDYLKQFWDSITHASGSRAAPFLIYQESNVIIRAVRDYLRQDIGEVLVDNPEIFEDVLN
FVQSVMPSYENKIKLYQDEIPLFSRYQIEAQIETAFQREVKLPSGGSIVIDPTEALVSID
INSARATKGGDIEETALQTNIEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQREVENRM
RQALELDRARVQVGKISRFGLLEMSRQRLRPSLEETRNEICPRCSGQGTIRSIESLALSI
MRLIYEEASKEKTGQVRAIVPVTVATFLLNEKRSLVSEIETKQGVSVLIIPSSLLETPQY
EVVRIREDESGTDTDVSYSIKPSEGETDTSVSDRQKDRVREEAAVKTLTPLAPAPTTTES
TGFLKKISAKLKSIFSDGTTEPQTNEPARPPTTSTPSSESQARSHSRRQDTDRRKDKSTP
TQQERGQRKAPQAKQRRTQENKPKQGADNQQGRSAQNKRQDSNKPQQNRNSQQLSSDFSD
DSKRPRRDRQKGAPDKPEAPRSRAKQSSAADIPEQDKQAQQTAKDTAPTTQEQKTASDDN
KGRKPRSTRNNRSNRERNSDKGANSKSHNSSREKDGATTDTSATDTQATEQAQNKPSRSP
SRSPAGKEPSASKEPSAGRESSTGKEPPANQGSASDKEPSTNKEPSANREPSANKEPSAN
KEPSANREPSANREPSANREPSANKEPSANREPSANKEPSPTTEPSTASEDSATKAPTAD
QTSASALTPSIHEDETLINPWNAAKIAEQKAAAQQKLEAAFTETPEPQASEETDANPWAK
SAESETSNTAPPSTETKEQTASNKSDDKKKQVAEESVAESTQDNAQVQHPETEASNTTET
KLNDTTADAPKIETPTTEDSAESEAKPKRPRRRGTPGKSRAHNDPRLARKKAAEEAKQAE
GSAEAAQSTADATASTTKSASQEEKTPEAQPTESTAGESTPDQSEITAPKAASE
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcaacgcaactcatgaagaagagctgcgcgtcgcattagtagatggacaaaaa
ctgtacgacctggacatcgaatcaggcaccagtcaaaccaaaaaagcgaacatttacaaa
ggcaaaattacacgaatcgaacccagccttgaagccgctttcgttgactatggcgcggaa
cgtcacggcttccttcctctgaaagaaatttccaaagaatatttcactactccaccttcg
caaatcaacggcaaaatcaacatcaaagatgtcgtaaccgaaggccaggaaatcatcatt
caggtcgacaaagaagagcgcggcaacaaaggagccgcacttacaacctttatcagcctt
gctggccggtacctggtactgatgccaaataaccctcgagcaggcggcatttccagaaga
attgaaggtgaagaccgcacgcaattaaaagaggcaatgtccggcttgaaaacgcctaaa
aacatgggcgtgatcgtacgaactgcaggtgtgggcagatccacggaagaactgcaatgg
gatcttgactacctgaaacagttttgggattccatcacccacgcatccggaagtcgcgca
gcaccattcctgatctaccaggaaagcaatgttatcattcgcgctgtcagagactatttg
cgccaggacattggtgaagtcctggtcgacaatccggaaatattcgaagatgtgctcaac
ttcgtacaatccgtgatgccatcctacgaaaataaaatcaaactgtatcaggatgaaatt
ccgctgttcagccgttatcagattgaagcgcaaatcgagaccgcttttcaacgagaagtt
aagctgccttccggtggctcaatcgttatcgacccgacggaagcattggtttccatcgat
attaactctgccagagcaaccaagggcggagacatcgaagaaaccgcactacaaaccaac
attgaagcggcagaagaaattgcccgacaattacgcttgagagatattggtggactgatt
gtcatcgacttcatcgatatgaccccagccaaaaaccagcgcgaagttgaaaatcgcatg
cgtcaggcgctggaattagaccgagcaagggtacaggttggcaaaatatcacgcttcgga
ttactggaaatgtctcgccagagacttcgcccttcactcgaagaaacccgaaatgaaatt
tgcccacgatgctctggtcaaggaaccattcgcagcatcgaatctcttgcactttcaatc
atgcgattaatctatgaagaggcatccaaggaaaaaacaggccaggttcgagcaatcgtt
ccagttaccgtagcaacattccttttgaatgaaaaacgatccctggtcagcgaaatcgag
acaaaacaaggcgtttcggtccttatcataccttcctccctgctggaaacacctcaatac
gaagttgtacgtatccgggaagatgaaagtggcaccgatacagatgtaagctattcaatt
aaaccttctgagggcgaaaccgatacatccgtttctgaccgccagaaagatcgggttcgg
gaagaagccgcagttaaaacgctgacaccactggctccagcccctacgacaaccgaaagc
acaggtttcctgaaaaaaatatcagcaaaattgaagtcaattttcagtgacggcaccacc
gagccgcaaacaaatgaacctgctcgtccgcctaccaccagcaccccaagtagtgagtcc
caggcacgctcacatagccgccgtcaggacacggatcgacgtaaagacaagtcaaccccg
acccaacaagagcgtggacaacgcaaagctcctcaagccaagcaacgtcgcactcaggaa
aataaacctaagcaaggtgccgataaccaacagggccgcagcgcacaaaataagcgtcaa
gactcaaataaacctcaacaaaaccgcaatagtcagcaattgagctctgatttttcagac
gatagtaaacggccccgtcgtgaccgccaaaaaggagcaccggacaagcccgaagcacca
cgctcgcgcgcaaaacaaagcagtgccgccgatataccggaacaagataaacaggcacaa
caaactgctaaagataccgcgcccaccactcaagagcagaaaaccgcttctgatgacaac
aaaggccgcaaaccacgctcaacgcgcaacaacagatccaaccgtgaacgcaactcggac
aagggcgccaacagcaaatcacacaacagctccagagaaaaagacggcgccacgacagac
acaagcgcgacagacactcaagctaccgagcaggcacaaaacaaaccatcacgctcgccc
agtcgttctccagctggcaaagagccatcagcaagtaaagagccatcagcgggtagagag
tcatcgacgggcaaagagccgccagcaaatcaaggatcagccagcgacaaagagccttcg
acgaataaagagccttcagcaaatcgagagccctcagcgaataaagagccctcagcgaat
aaagagccctcagcaaatcgagagccttcagcaaatcgggagccttcagcaaatcgggag
ccctcagcaaataaagagccctcagcaaatcgagagccttcagcgaataaagagccctca
ccgaccacagaaccgtcgaccgcaagtgaagactcagcaaccaaagcaccaacagcagat
caaacctctgccagtgcgttgacaccctcgattcatgaagatgaaacactcataaaccct
tggaacgcagcgaaaattgccgaacaaaaagcggcagcccaacaaaaactggaagccgca
tttaccgagactccggagccccaggcaagcgaagaaaccgatgcaaatccttgggcaaaa
agtgcggaatcagaaacgagcaataccgctccgccatctactgagacaaaagaacaaact
gcctctaacaagtctgacgacaagaaaaaacaagtcgcagaagagtctgttgccgaaagc
actcaggataatgcacaagttcaacaccctgaaaccgaagcttccaacacaaccgaaacc
aagttaaatgatacaactgctgatgcgccaaaaatcgaaacaccaacaaccgaggattcc
gctgaaagtgaggccaaacccaaacggccccgacgcagaggtacacccggaaaatcacgt
gcgcacaacgatccaaggctagcaagaaaaaaagcggcagaagaagcgaaacaggcagaa
ggctctgctgaagcagcacaaagcaccgctgatgcaacagcatccacaactaaaagtgcc
tctcaggaggaaaaaacaccagaagcccagccgacggaatcgactgctggcgagagcacg
cctgatcaaagtgagataacagcgcccaaggcagcctcagaataa
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