Oleiphilus messinensis: OLMES_3349
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Entry
OLMES_3349 CDS
T04860
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ome
Oleiphilus messinensis
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ome03016
]
OLMES_3349
Enzymes [BR:
ome01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OLMES_3349
Transfer RNA biogenesis [BR:
ome03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OLMES_3349
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ARU57389
UniProt:
A0A1Y0IB46
LinkDB
All DBs
Position
complement(3786926..3788068)
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AA seq
380 aa
AA seq
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MSLNVVFVASNEQLINLSRQWKGQRWLCVDTEFVRVNTFYPELGLLQIADEYGVYLVDPL
ACADLQVIADVLQDPQILKIMHSISEDIEVFSHALRCAPQNIFDTQIGAALAGKGGSIGY
GALVEDYLSIGLPKSETRSDWLRRPLSSKQLDYSADDVRYLYPVYQKLFEELQHLGFYEA
AVEESDRALNSALSNDPDDHYYLKLRGAWKLPTKKQQLLRSLCSWREQQAKSCNVPRQHV
ISDNALIEIAQRRPSSIQKLSRIPKLRPSVIKTHSDTLLKLIRESEFDSGEFAGRIPPPL
RLVEQKLYKRLKAIVLQFSEQTGIAPEVVGRRKVLEKAVRETLDTGEVSLPDDFNGWRAQ
NLRPMFEREMQLFLASVTVE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttaaatgttgtatttgttgcttccaacgaacagctgattaacctttccaggcaa
tggaaaggtcaacgctggttgtgtgtggatactgaatttgtacgggtaaacacgttttac
cccgaactgggcctgttgcagatagcagatgaatacggggtctatcttgtagacccgtta
gcttgtgcggatttacaagtgatcgccgatgttttacaagacccgcagatcctgaagatc
atgcattcgatcagtgaagatattgaggttttctcgcacgctttaagatgtgcacctcaa
aatatctttgatacccagattggtgctgcgcttgccggcaaagggggatcgattgggtac
ggcgcgttggtggaagattatttgtcgattggtttgcctaaatctgaaacccgttcagat
tggttgcggcgtccgcttagcagtaagcagcttgactattctgcagacgatgtacggtat
ttatatcctgtctatcaaaagctctttgaggaactccagcatctgggattttatgaggcc
gcggtggaagaatcagatcgtgccctgaattctgcattatcaaatgatccggatgatcac
tattatttaaaattgcgcggtgcctggaagttacccacaaaaaaacagcaattgttgcgc
tcgctatgtagttggcgtgagcaacaggccaagtcttgtaatgtgccgcgccaacatgtt
attagtgacaatgccttgatcgaaattgctcaacgtcgcccgtcctctatacaaaagctg
tcacgtattcccaaacttcgtcccagtgtgattaaaacccacagtgataccttgttgaaa
ctgattcgtgagtcagaatttgattcgggggagtttgctggtagaattcctcccccgctt
agattggttgagcaaaaattatacaagcgactaaaggcgatcgttttgcagttcagtgag
caaaccggtattgcgccggaggtggtaggtcgtcgcaaggtcttggagaaggctgttcgt
gaaacattggatactggtgaagtcagtttgccagacgattttaacgggtggcgcgcgcag
aatttgaggccgatgtttgagcgggaaatgcagttgtttctggcaagtgtgactgtagag
taa
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