Oleiphilus messinensis: OLMES_3440
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Entry
OLMES_3440 CDS
T04860
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ome
Oleiphilus messinensis
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ome03032
]
OLMES_3440 (topA)
03400 DNA repair and recombination proteins [BR:
ome03400
]
OLMES_3440 (topA)
Enzymes [BR:
ome01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OLMES_3440 (topA)
DNA replication proteins [BR:
ome03032
]
Prokaryotic type
DNA Topoisomerases
OLMES_3440 (topA)
DNA repair and recombination proteins [BR:
ome03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OLMES_3440 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ARU57478
UniProt:
A0A1Y0IAE7
LinkDB
All DBs
Position
complement(3900807..3903482)
Genome browser
AA seq
891 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSKFVVKSSVGHIRDLPTTGSGSTTDPKERARIAAQTRK
MSPEEKAVYKKRKAKEQLVNRMGVDPESDWKAQYQILPDKEKVVSELQRLAESADEIYLA
TDLDREGEAIAWHLTEAIGGDESRYRRVVFNEITKKAISEAFQQPSSLDTNRVNAQQARR
FLDRVVGYMVSPLLWAKVARGLSAGRVQSVAVKLIVEREREINAFIPEEYWEVFADLLTQ
ENSPLRMQVSKYMGKAFRPTSKDDTDSLLALLQGANYRVLQREDKPTSSKPNAPFITSTL
QQAASNRLGFSVKKTMKLAQRLYEAGYITYMRTDSTNLSAEAVESCRGFIDSQYGSSYLP
PEARNYSSKEGAQEAHEAIRPSDVNVKAVDISGLEKDAERLYELVWSQFVACQMSDAQYL
SSSITVQAGDFELRARGRIMKFDGYLKALPAYMKKDDSLVLPDVKQGEAMGLKALDPKQH
FTKPSPRYSEAALVKELEKRGIGRPSTYASIISTIQDRGYVTLQNRRFYAEKIGDIVTDR
LSESFDDLMDYGFTAQLEERLDDIATGKLEWKAVLNEFYSGFTGKLSKAESDEGGMRVNQ
PVETDITCTDCGRPMQIRTASTGVFLGCSGYALPPKERCKNTINLISGDEVVNADEDEEG
ESRLLMKKHRCAICGTAMNSYLLDEKRKLHICGNNPDCTGYDIELGNFKIKGYDGPVLEC
DKCGSDMQLKTGRFGKYFGCTADDCSNTRKLLKNGEPAPPKMDPVPMPELNCEKVEDTYV
LRDGASGLFLAASKFPKNRETRAPLLKELLPHKEEIDEKYHFLFSGPVADPDGEPAVIRY
SRKTKEQYLMSEVEGKATGWSAFYEGGKWVEQNKKAAKATKGAAAAKKKKA
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcactggtcattgtggaatcgccagccaaggcaaagacaattaacaagtac
ttggggtcaaagtttgtcgtcaagtcgagtgtggggcatatccgagatttgcccacaact
ggatcaggatccacaactgatccaaaagagcgcgcgcgaattgctgctcaaacgcgaaaa
atgagccctgaagagaaagcggtttataaaaagcgaaaagcaaaggagcaattggtaaat
cggatgggagtcgatccggaatccgattggaaagcgcagtatcaaatcttgcctgacaaa
gagaaagttgtctctgaattacaacgattggcagaaagtgccgatgaaatctatctggct
acggatttggatagagagggggaggccattgcctggcatttgactgaagccattggcggt
gatgaaagtcgataccggagagtggtttttaatgaaatcactaaaaaagcgatcagtgaa
gcctttcagcaaccatcatcgcttgatactaaccgtgtaaatgcacaacaggcacgtcgc
tttctcgaccgtgttgttggttacatggtgtcacctctcctgtgggcgaaagtcgcgcgt
ggattatccgccggtcgggtccagtccgttgctgtaaagttgattgtcgagcgcgagcgt
gagatcaacgcattcatcccggaagaatattgggaagtctttgccgatctgttgacccaa
gagaattctcctcttcggatgcaagtttcgaagtatatggggaaagcgttccgtccaacg
agtaaagacgataccgatagtttgttggcattgctccagggggctaactaccgggttctg
cagcgtgaagacaaaccgacaagctccaagccgaatgctccgtttatcacttcaacgttg
cagcaggcagcgagcaacagactgggttttagcgttaaaaagacgatgaagttagcccag
cgcctctatgaggcgggttacatcacttacatgcgaacggattcaacaaatcttagtgct
gaggctgtggagtcctgtagaggctttattgacagtcaatatggttcgtcttacttgccc
cctgaagcacggaactattcgagcaaagaaggcgctcaggaagcgcatgaggcgattagg
ccgtcagatgtaaatgtcaaggcggtggatatttccggtcttgagaaagatgctgagcgc
ctgtatgagttggtctggagtcagtttgtggcttgtcagatgagtgatgctcaatatttg
agttcttcaatcactgtgcaggcgggtgactttgaattgcgggcccgtggtcggattatg
aaattcgacggttacttgaaagcgttacccgcttacatgaaaaaagatgactctctggtt
ttgccggatgttaagcaaggcgaggcgatggggctcaaagcgctggatccgaagcagcac
tttaccaagccttcgccgcgttattctgaagccgctttggttaaagagttggaaaaacgg
ggcattggtcggccctcgacctatgcttcgatcatatccacgattcaggatcggggttat
gtgacactccagaatcgccgcttttatgcggaaaaaattggcgatatagtaactgatcgc
ctttctgaatcgtttgatgatttgatggattatggatttaccgcgcaattggaagagcgg
ctagatgacattgcaaccggcaagctggaatggaaagcggtattaaatgagttttattcc
ggttttacgggcaaactgagcaaggctgagtctgacgagggcgggatgcgcgtaaatcag
cctgtggaaacggatattacctgtaccgattgtgggcggccgatgcagatacggactgcc
agtactggcgtatttctgggttgctcaggttatgctttgccgcccaaggagcgctgcaaa
aatactattaatcttatctctggtgatgaggtcgtcaatgctgatgaggatgaggaaggt
gaatcccggctattgatgaagaagcatcgatgcgccatctgtggcactgcaatgaatagt
tacttgctggatgaaaagcgtaaactacacatctgtggcaataatccggattgcactggc
tatgacatcgaattgggtaacttcaaaatcaagggttacgatgggccagttttggagtgt
gacaagtgtggttcggatatgcagctgaaaaccgggcgctttggcaagtatttcggttgc
acggccgatgattgcagtaatacccggaagttgttaaagaatggtgagcctgcgccgccg
aaaatggatccggtgccgatgccagagttaaattgcgagaaagtggaagacacctacgtt
ttgcgcgatggggcttcaggtctttttctggctgccagtaagtttccaaagaatcgggag
actcgagcgccattgttgaaagagttgttgccgcacaaggaagaaattgatgaaaagtat
catttcttgttttccggtccggttgctgaccccgatggcgagcctgcggttatccgctat
agtcgcaagaccaaggagcaatacctgatgtcggaagttgagggcaaggcgacggggtgg
tctgctttttacgagggtggtaaatgggttgagcagaacaagaaagccgctaaagcaaca
aaaggagcggcggcagcgaagaagaaaaaagcgtaa
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