Oleiphilus messinensis: OLMES_3464
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Entry
OLMES_3464 CDS
T04860
Name
(GenBank) excinulease of nucleotide excision repair, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
ome
Oleiphilus messinensis
Pathway
ome03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OLMES_3464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ome03400
]
OLMES_3464
DNA repair and recombination proteins [BR:
ome03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OLMES_3464
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OLMES_3464
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_22
AAA_30
Kinesin
DUF87
Motif
Other DBs
NCBI-ProteinID:
ARU57500
UniProt:
A0A1Y0IB67
LinkDB
All DBs
Position
complement(3927869..3929887)
Genome browser
AA seq
672 aa
AA seq
DB search
MTTEFEVISNFPPAGDQPGAIAKLVEGIEDGLAHQTLLGVTGSGKTFTIANVIAQVKRPT
IILAHNKTLAAQLYGEFKEFFPKNSVEYFVSYYDYYQPEAYVPSSDTYIEKDASINEHIE
QMRLSATKALLEREDAIIVATVSAIYGLGDPKLYLGMMLHLDRGDRITQRDILRRLAELQ
YTRNDYELHRATYRVRGDVIDVFPAESERDAIRIELFDDEVENLSFFDPLTGEVIRKVPR
ITVYPKSHYVTPRETILEACDKIKEELKSRLENLRNHHKLVEAQRLEERTRYDLEMMAEL
GYCNGIENYSRYLSGRKPGQAPPTLFDYLPPEALLVIDESHVTLPQLGAMYKGDRSRKEN
LVEYGFRLPSALDNRPMRFDEWESIAPQMIFVSATPGDYEARYVSSPVEQVVRPTGLLDP
EIEVRPASTQVDDLLSEIAKRVTINERVLVTTLTKRMAEDLTDFLLDHDIRVRYLHSDID
TVERVEIIRDLRIGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNLNGKAILYGDKVTGSMARAMDETQRRRRKQEAFNAEHGIVPKGLQKSVKDIMEGAV
IPGRKISGKQKRVAEAAGEYTHTLTSPEQLAGKIKTLEDEMYQAATNLEFERAAQIRDSI
AELKKTILLNAD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgactacagaattcgaagtgatttcaaattttccaccggctggcgatcagccaggcgcg
attgccaaactcgtagaaggcattgaggacgggcttgctcaccagaccctattgggggtt
accgggtcgggtaagacctttaccattgctaatgttattgcgcaagtaaagcgaccgaca
ataatactggctcataacaagactctggcggcgcaattatacggggaattcaaagaattt
ttcccgaaaaactcggtggagtactttgtatcgtactatgactactatcaaccggaggct
tatgttccgtcgtcagatacttatatagaaaaagatgcatcgattaacgagcacattgaa
caaatgcgtctctctgcgaccaaagcgttgttggagcgggaggatgccataatcgttgcc
accgtgtcggcgatatatggtttgggggatccaaaactatatctcggtatgatgctgcat
ctggaccgtggggaccgaataacccaacgggatatactgcgccggctcgcggagttgcaa
tatactcgtaatgattatgagttgcatcgggcaacctaccgggttcgtggtgatgtaatt
gatgtttttccagcggaatcagagcgagatgcaattcgcatcgaattattcgatgatgaa
gttgagaacctgagtttctttgatccattgaccggcgaggtcattcgtaaagtacctcga
attacggtgtatccgaaaagtcattacgttactccccgagaaacgattctggaagcctgt
gacaaaattaaggaggaactcaaaagcaggctcgaaaatttgcggaaccaccataaactt
gttgaagcgcagaggctcgaagagcgaactcgttatgatctggagatgatggccgagtta
ggttattgcaatggcattgagaattactccagatatttatcagggcgcaagcccggtcaa
gcccctccgaccttgtttgattaccttcccccggaggcattgctcgtgattgatgaatca
cacgttacccttcctcagcttggagcgatgtacaagggggatcggtcacggaaagaaaat
ctggtcgaatatggctttcgtttgccttcagcgttagacaatcgacccatgcgtttcgat
gagtgggagagtattgcgccacaaatgattttcgtttcggcaacaccgggggactatgag
gccaggtatgtctcttctccggttgagcaagttgtgcgcccgactgggctacttgatcca
gagattgaagttcggcctgcttcaacccaggtggacgatttactttccgaaatcgcaaaa
cgggtcaccatcaacgagcgggttctggttaccacacttaccaaacgaatggcggaagac
cttaccgattttcttttggatcatgatatacgtgtacggtatttgcactcggatatagac
actgtggagcgggtagagattatacgagaccttcgaatcggaaagtttgatgtgctggtc
ggtattaaccttttacgtgagggtctggatatgccagaagtttctttggttgcgattctg
gatgcagacaaagaaggctttctgagatcggagcgctcattgatacaaaccattggtcga
gccgcccggaatctaaacggaaaggcaatattgtacggagataaagttacggggtcgatg
gcacgagcaatggatgaaacccagcggcgaaggcggaagcaagaagcatttaatgcagag
cacggaattgtgccaaaaggtcttcagaaaagcgtaaaagatattatggaaggcgctgtg
attccagggcgtaaaatttctggtaagcaaaagcgtgtcgctgaagcagcaggcgaatat
actcatacattaacttctccggaacagctcgcagggaaaatcaaaacccttgaagatgag
atgtatcaggctgcaacgaatcttgagtttgaacgtgcagcacaaatccgtgactcaatc
gcagagttgaaaaaaacaatcttgttgaatgctgattag
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integrated database retrieval system
