Oleiphilus messinensis: OLMES_4196
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Entry
OLMES_4196 CDS
T04860
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ome
Oleiphilus messinensis
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ome03021
]
OLMES_4196
Transcription machinery [BR:
ome03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OLMES_4196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Tudor_RapA
Helicase_C
ResIII
DEAD
Helicase_RecD
DUF655
Motif
Other DBs
NCBI-ProteinID:
ARU58212
UniProt:
A0A1Y0ICC8
LinkDB
All DBs
Position
complement(4796575..4799412)
Genome browser
AA seq
945 aa
AA seq
DB search
MSFSIGQRWVSLTESHLGLGMIAEFTGRQVTVSFPAAGEMRVYASNNAPLSRVLYGEGDT
IRTADNRQLLVTAVEEFQGILKYTGTDEYGKSHTIREVQLDCFTQLIAPQQRLFSGHYNK
KAPFQLRVETLNLLNDLQQSNAKGLIGSRTSHLPHQIYIASEVARRHAPRVLLADEVGLG
KTIEAGMILHYQLHTGRASRVLIVVPDSLVHQWLVEMLRRFNLKFSIFDKARFDAIKAEG
QENPFEAEQLVLTSLSFLAGNDQVSALANAAGWDMLIVDEAHHLHWDETQSSREYQCVEA
LSAVSEGLLLLTATPEQIGLESHFARLRLLDPSRFYDLEVFKAEEAGYQKLNEVVQRLQE
RDSLAGKEPLEDDLVHVLRDYLGDEAEQLISGEAANLELIIEKLLDRHGTGRVLFRNTRS
AVKGFPERVLHTHALKCPALYEADMKRFSISGLTPERNIEDLFWLKIDPRVTWLTEFLKE
NRQEKVLVICAKESTASELEQHLRLYEGVRSAAFTESMSIIERDRAGAYFAETENGAQVL
ICSEIGSEGRNFQFSRHLILFDLPLNPDLLEQRIGRLDRIGQVHDINIHVPFIENTSQQY
LYRWYKEGMNLFARPIGVAYSIYEQFAERLEAELCHPSERFEALLQEAAAKTESTLAAQE
EGRDKLLELHSCNEEKAAEVIALIEDAEEGSQLQEYMENVFNLFGVDCEYHSENARILRP
TEHMHSGYFPGVSDEDGTTITYSRKQALSRDDMQFVSWEHPMVVESMEMILNSEFGNASL
ATMAVKALKPGTLLLEAVFTINCVAPKRFQIEQFLPISPIRVLVDINGQDLSQVVPHDKL
NTLCDNVKKPTGQALLKQVKSEIETMLEHATGFAEKQLPDIREQAQNTLQLKMMPELERI
LALKKINPSIRDEEVEYFRSCIEQGARAIGRSAVQLQALRLIVNT
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttagtattggtcaacgatgggtcagtcttaccgaatcccacttgggtctgggt
atgatcgcagaattcactggaagacaggtcaccgtcagttttcccgcagcaggcgaaatg
cgggtgtatgcaagtaacaatgctcctttgagccgggttttatatggcgagggcgacacg
attcgtaccgccgacaacagacagttactggtgactgctgttgaagagtttcagggtatt
ttgaaatacaccggtacggatgaatacggtaaatcccataccattcgcgaagtgcaactg
gattgcttcactcagctgattgcaccccagcaacgtttattcagtgggcactacaacaag
aaagcaccttttcaactccgcgttgaaacactcaatttgctaaatgatttacaacaatcc
aatgcgaaaggcttgattggttcccgtactagtcacttaccccatcagatttacatcgcc
agtgaagtggctcgtcgacacgctcctcgtgttttactcgccgatgaagtcgggctcggt
aaaacaattgaagcgggaatgatattgcattatcaactgcacacggggcgagcgtccaga
gtgttgattgtcgtaccggacagtcttgtgcatcaatggctcgttgaaatgttgcgtcga
ttcaatcttaaattctcgatcttcgacaaggcccgttttgatgcaatcaaagcagaggga
caggagaacccgttcgaagcagaacaactcgtattaaccagtctttcattcctggctgga
aatgatcaggtatctgccctggcaaacgctgcgggttgggatatgttaatcgtcgatgaa
gcgcatcatttgcactgggatgaaacgcaatccagtcgtgaatatcaatgtgtggaagca
ctttctgcggtcagtgagggcttgttgttgttaactgcaacgcctgagcagatcggtctg
gagagtcactttgcgcggttacggctgctggatccgtcccggttttatgatctggaagtg
ttcaaggcggaagaggcggggtaccaaaagctgaatgaagtcgtccaacgtctgcaagag
cgggatagtttggcaggtaaagagcccctggaggatgatttggttcatgtgctcagggat
tacctgggtgatgaagcggaacagctgatttcgggcgaggcggcgaatctggagctgatt
atcgagaagctgcttgatcgtcacggcactgggcgggttttgttccgtaatacccgttca
gccgttaaaggcttccctgaacgtgtattacacacgcacgcactgaagtgtccggcttta
tacgaggcggatatgaaacgcttcagtatcagtggcctgacccctgaacgtaatattgaa
gatttgttctggctcaagatcgatcctcgagtgacctggctaactgagtttctcaaagaa
aaccgccaggagaaagtgctggtaatttgtgcgaaagaatcaaccgcatcagaattggaa
cagcacctccggctgtatgaaggtgttcgcagtgctgcgttcactgaatccatgtcgatt
attgagcgcgacagagctggtgcgtattttgcagaaactgaaaatggtgcacaggtatta
atttgttcggagattggcagtgaaggccgtaatttccagttttcccgtcatttgatcttg
tttgatctaccgcttaatcctgacttgttggaacaacgcatcggtcgtctggatcgaatc
ggtcaggtgcatgatatcaacattcacgtccccttcatcgagaacacctcccaacagtat
ctctatcgctggtataaagaggggatgaacctgttcgcccgccccattggtgtggcatac
agtatctacgagcaatttgcagaacgccttgaagcggagctgtgtcatccttctgagcga
tttgaagcgctgttgcaagaagctgcagcgaaaacggaaagcaccttggccgctcaggaa
gaaggtcgtgacaagcttctggagctgcattcctgcaatgaagagaaggctgctgaagta
attgccttgattgaagatgcagaagagggtagtcagcttcaggagtatatggaaaatgtc
tttaacttgtttggtgttgattgtgagtatcattcagaaaatgcccgcatattaaggccg
acagagcatatgcacagtggctatttccctggcgtaagcgacgaggatggcaccacgatt
acctactccagaaaacaggcgctgagtcgtgatgacatgcaatttgtgagttgggaacac
cccatggtggttgaatccatggagatgattctgaattcagaattcggtaacgcctcattg
gcgaccatggcagttaaagcgctcaagcccgggacactcttgctcgaagcggttttcaca
atcaactgtgtcgcaccgaaacgcttccagattgagcagtttttgccgatttcgccaatc
cgtgtgctggtggatattaacggccaggatctcagccaggtcgtacctcatgacaagctg
aataccctgtgtgacaatgttaaaaagcccaccggccaagcgctcctgaagcaagtgaag
agtgaaatcgagaccatgcttgagcatgcaaccggattcgcagaaaaacagctaccggat
attcgtgagcaagcgcagaatacgttgcagttgaaaatgatgccagaactggaaagaatt
ctggcattgaagaagatcaacccttccatccgagatgaggaagtggagtattttcgtagt
tgcatcgagcagggcgcgcgagccattggtcgttctgccgttcaactgcaggcgcttcgt
ctaatcgtcaatacttga
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