Oleiphilus messinensis: OLMES_4794
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Entry
OLMES_4794 CDS
T04860
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ome
Oleiphilus messinensis
Pathway
ome03420
Nucleotide excision repair
ome03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OLMES_4794
03430 Mismatch repair
OLMES_4794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ome03400
]
OLMES_4794
Enzymes [BR:
ome01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OLMES_4794
DNA repair and recombination proteins [BR:
ome03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OLMES_4794
MMR (mismatch excision repair)
Other MMR factors
OLMES_4794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
DUF6364
Motif
Other DBs
NCBI-ProteinID:
ARU58783
UniProt:
A0A1Y0IHB2
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All DBs
Position
complement(5452810..5454978)
Genome browser
AA seq
722 aa
AA seq
DB search
MDVSHILDNLNSAQREAVTAPLSPMLVLAGAGSGKTRVLVHRIAWLMTMESMSPHSVLAV
TFTNKAAREMRGRIEALLGSASRGMWFGTFHSLAHRLLRAHWRDADLPENFQIIDSDDQL
RLIKRIMKELQIDESKWPPRQAQGFINSAKDDGRRAGQVHDAKGGKGGHDLYLKAMTAIY
QAYEAYCNRSGLLDFGELLLRSHELWLRNPELLRHYQSRFKVILVDEFQDTNTIQYAWLR
VLAGQEVPLTVVGDDDQSIYGWRGARIENIQQFQQDFANSRLVRLEQNYRSTRTILDASN
ALIAGNSGRLGKQLWTEGEDGEPIDVYAAFNEQDEANYLAERMQGWVESGGLRQDIAVLY
RSNAQSRVIEESLLRHNVPYRIYGGLRFYDRAEIKNALAYLRLVHFAHDDAALERVVNVP
ARGVGAKTLENIREHARQNAISLWQAIEQLVESKGVSARARKSLAEFMGIIYRLTELKSE
ISLSELVKQMLDESGLLDFHGAEKNDKAQARVENLEELINATKDYEPEENLTPLAAFIAQ
AALDAGENQAGEHEDCVQLMTLHSAKGLEFPLVFLVGLEEGLFPHSLSVEEPGRMEEERR
LCYVGMTRAMKKLVLTYAESRRLYGQDQFNSVSRFIREVPVAFLQEVRIGSCLSSASDFQ
QSSPLAQNDTGGFSLGQRVRHQKFGEGVVISCEGQGPHSRIQVNFSEGSKWLVLSYAKLE
VI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctcatatactcgataacctcaattcggcccaaagagaagcggtcactgca
ccccttagccctatgctggtgcttgcgggggcagggagtggcaagactcgagtgctggtc
catcgaattgcctggttgatgaccatggagtcgatgtcgccccacagtgttctcgcggta
acgtttaccaacaaggctgccagggaaatgcgtgggcgaatcgaagcgttactgggtagc
gcttcccggggaatgtggtttggtacatttcacagtttggcccacaggttgttgagagca
cactggcgtgatgcggatttacctgaaaatttccagattatcgactctgacgatcaactt
cgcctcatcaagcgaatcatgaaagagttacagatcgatgaatcaaaatggcctccgcgc
caagcccaggggtttatcaatagcgcaaaagatgatggtcgaagagcaggacaggtccat
gacgcgaaaggggggaagggtggccatgatctgtatttgaaagccatgaccgcgatttat
caggcgtatgaggcgtattgtaaccggtccggcttgctggattttggcgagttgctgttg
cgaagtcatgagttatggttacgcaatcctgaactgttacggcattaccagtcacgtttc
aaggtcatactggtcgatgagttccaggatacgaacacgatccagtatgcctggttgaga
gtgcttgcggggcaagaggttcccttgactgtcgtgggtgatgatgatcagtcgatatat
ggatggcggggcgccaggattgaaaatattcagcaatttcagcaggactttgcgaattca
agactcgtccgtctggagcagaattaccggtcaacccgaacgattctggacgcttccaac
gcattgattgccggaaattctggccggttgggaaaacaattatggacggaaggcgaagat
ggcgagccgattgatgtatacgccgcgtttaatgagcaggatgaagcgaattatctggcg
gagcggatgcaaggttgggttgagtccggaggacttcggcaagatatcgcggtgttgtac
cgcagcaatgcccagtcccgggtcattgaagagtctcttctgaggcataacgtaccgtac
cgtatttatggtgggctgcgcttttatgatcgggctgaaatcaaaaatgcactggcgtac
ctcagactggtgcattttgcccatgatgacgcggcattggagcgggtggtgaatgtaccc
gccagaggtgtcggcgcgaaaaccctggaaaatattcgcgagcatgcacggcagaatgca
atttcgctgtggcaggcgattgagcaattggttgagagcaaaggggtgagtgcccgagcc
cgtaaatcgctggcagaatttatggggattatttatcgcctgactgagctcaaatcggag
atttctctgagtgaactcgtaaaacagatgctggatgagagtggtctgctggattttcat
ggcgctgaaaaaaatgataaggcacaggcgcgggtcgaaaacctggaagaattgatcaat
gcgaccaaagactatgagccggaagaaaacctcacaccgctggccgcttttattgctcag
gctgcactggatgccggagagaatcaggccggggagcacgaagattgtgtgcagttgatg
acgctgcactcagccaaaggcctggagtttcctctggtcttcctggttggtttggaagaa
ggactatttcctcacagtttatctgttgaagagccgggacgcatggaggaagagcgcagg
ctctgctatgttggtatgacccgggcgatgaaaaaactggtattaacctatgctgagtcc
cggcgcctttacgggcaagatcaatttaatagtgtgtcacgctttattcgcgaagttccc
gtagcatttcttcaggaggttcgcattggcagctgtctctcatcagcgtctgattttcag
caatcttcgccgttggctcaaaatgatactggcggtttttcccttggccaacgggtccgg
catcagaagttcggggaaggtgttgtgattagctgcgaggggcaggggccacattcgcgt
attcaggtgaatttcagcgaaggcagtaagtggttggtgttgtcctatgccaagctggaa
gtcatttaa
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