Oleiphilus messinensis: OLMES_5220
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Entry
OLMES_5220 CDS
T04860
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ome
Oleiphilus messinensis
Pathway
ome02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OLMES_5220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ome03021
]
OLMES_5220
Transcription machinery [BR:
ome03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OLMES_5220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
HTH_10
DUF8073_C
Motif
Other DBs
NCBI-ProteinID:
ARU59204
UniProt:
A0A1Y0III1
LinkDB
All DBs
Position
5941973..5943184
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AA seq
403 aa
AA seq
DB search
MGNAILSKLENHGSVQAPDSGGAPAIDLYMRELRELEIMGEEEERQFGTNIQSAIRMLLA
EIVSSPDQWAELEHWLTELLHNHGQDINIVFSDKPDDLLKLECILTTLIDTLKVLDHMNK
NRQPEYSAVQGNLVFMLEGMRISRNQLVNFAKLVSRNTDNTAEQVRFSGALKHYLQLRNQ
LIEKNLRLVMAQARRYKATGCSLEDIVQNGNLGLIKAADRFDFQRGYRFSTFAVWCIQSA
IKYRSQRTRHTIAKPPHLQDQLGRVLSLRDHLQQQLGRPPRSTELAKASGLDYEQVNHLL
SLPQAFESTDQNPMPDGKTSLIDSIKDEGSTIEHALKHEQQTRLLDQLMRPLTQRERLIL
LMRYGIGYPRSYTLHEIATQLGLSFERIRQLQNQATRKLNRIP
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgcaatcctatccaaactcgaaaaccacggttcagtacaggctcctgattca
ggaggggctcccgcaatcgatctctatatgcgcgaactgcgtgagcttgaaattatgggt
gaagaagaggaacggcaatttggcacgaacattcaatccgccattcgcatgcttctcgct
gaaatcgtctcgtctcccgatcaatgggctgaacttgaacactggttaacggaactgctg
cacaaccacggccaggacatcaatattgtcttttcggacaaaccagatgacttgctcaag
ctggaatgcattctgaccacactgatcgacaccctgaaagtgctcgatcacatgaacaaa
aacaggcaacccgagtattcggcagtgcaaggcaatttggtgttcatgctggaaggcatg
cgtatttcacggaaccagctggtaaactttgccaaactcgtttcccgaaatacagataac
acggcagaacaggtacgtttttcaggggcgctaaaacattacttgcagcttcgcaatcaa
ctgattgaaaaaaaccttcgactggtcatggctcaggcccgacgctacaaggcaaccggg
tgcagccttgaagatatcgtgcaaaatggcaacttgggcttaatcaaagctgcggatcgt
tttgacttccagcggggctaccggttttccacttttgccgtctggtgtattcaaagcgca
atcaaataccgcagccagcgcacccgccatacgattgccaagccccctcacctgcaggat
cagctgggtcgcgtgctcagcttgcgcgaccatttacagcaacaactgggtcgcccgcca
cgatcaacagaattagccaaagcatccggactggattatgaacaggtcaaccacctactg
agcttgccccaggcattcgaatccaccgaccaaaacccaatgcccgacggaaaaaccagc
ctgatcgattcaatcaaagacgaaggctcaaccatcgaacacgccctgaaacacgaacaa
caaacacgcctactggatcaactaatgcgcccgcttacccagcgagaacgtttaatcctg
ctcatgcgctacggcatcggctacccccgaagctacaccctccacgaaatcgccacacaa
ctcggcctaagcttcgaacggatacggcaactgcaaaatcaggctaccagaaaactcaac
aggattccgtaa
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