KEGG   Oleiphilus messinensis: OLMES_5220
Entry
OLMES_5220        CDS       T04860                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
ome  Oleiphilus messinensis
Pathway
ome02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ome00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    OLMES_5220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ome03021]
    OLMES_5220
Transcription machinery [BR:ome03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     OLMES_5220
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 HTH_10 DUF8073_C
Other DBs
NCBI-ProteinID: ARU59204
UniProt: A0A1Y0III1
LinkDB
Position
5941973..5943184
AA seq 403 aa
MGNAILSKLENHGSVQAPDSGGAPAIDLYMRELRELEIMGEEEERQFGTNIQSAIRMLLA
EIVSSPDQWAELEHWLTELLHNHGQDINIVFSDKPDDLLKLECILTTLIDTLKVLDHMNK
NRQPEYSAVQGNLVFMLEGMRISRNQLVNFAKLVSRNTDNTAEQVRFSGALKHYLQLRNQ
LIEKNLRLVMAQARRYKATGCSLEDIVQNGNLGLIKAADRFDFQRGYRFSTFAVWCIQSA
IKYRSQRTRHTIAKPPHLQDQLGRVLSLRDHLQQQLGRPPRSTELAKASGLDYEQVNHLL
SLPQAFESTDQNPMPDGKTSLIDSIKDEGSTIEHALKHEQQTRLLDQLMRPLTQRERLIL
LMRYGIGYPRSYTLHEIATQLGLSFERIRQLQNQATRKLNRIP
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgggcaatgcaatcctatccaaactcgaaaaccacggttcagtacaggctcctgattca
ggaggggctcccgcaatcgatctctatatgcgcgaactgcgtgagcttgaaattatgggt
gaagaagaggaacggcaatttggcacgaacattcaatccgccattcgcatgcttctcgct
gaaatcgtctcgtctcccgatcaatgggctgaacttgaacactggttaacggaactgctg
cacaaccacggccaggacatcaatattgtcttttcggacaaaccagatgacttgctcaag
ctggaatgcattctgaccacactgatcgacaccctgaaagtgctcgatcacatgaacaaa
aacaggcaacccgagtattcggcagtgcaaggcaatttggtgttcatgctggaaggcatg
cgtatttcacggaaccagctggtaaactttgccaaactcgtttcccgaaatacagataac
acggcagaacaggtacgtttttcaggggcgctaaaacattacttgcagcttcgcaatcaa
ctgattgaaaaaaaccttcgactggtcatggctcaggcccgacgctacaaggcaaccggg
tgcagccttgaagatatcgtgcaaaatggcaacttgggcttaatcaaagctgcggatcgt
tttgacttccagcggggctaccggttttccacttttgccgtctggtgtattcaaagcgca
atcaaataccgcagccagcgcacccgccatacgattgccaagccccctcacctgcaggat
cagctgggtcgcgtgctcagcttgcgcgaccatttacagcaacaactgggtcgcccgcca
cgatcaacagaattagccaaagcatccggactggattatgaacaggtcaaccacctactg
agcttgccccaggcattcgaatccaccgaccaaaacccaatgcccgacggaaaaaccagc
ctgatcgattcaatcaaagacgaaggctcaaccatcgaacacgccctgaaacacgaacaa
caaacacgcctactggatcaactaatgcgcccgcttacccagcgagaacgtttaatcctg
ctcatgcgctacggcatcggctacccccgaagctacaccctccacgaaatcgccacacaa
ctcggcctaagcttcgaacggatacggcaactgcaaaatcaggctaccagaaaactcaac
aggattccgtaa

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