Oryzias melastigma (Indian medaka): 112136118
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Entry
112136118 CDS
T07439
Symbol
ptcd2
Name
(RefSeq) pentatricopeptide repeat-containing protein 2, mitochondrial
KO
K17711
pentatricopeptide repeat domain-containing protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oml03029
]
112136118 (ptcd2)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112136118 (ptcd2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MRP-S27
PPR_2
PPR
PPR_1
FH3_FHOD1-3
Motif
Other DBs
NCBI-GeneID:
112136118
NCBI-ProteinID:
XP_024113479
Ensembl:
ENSOMEG00000012396
LinkDB
All DBs
Position
LG12:7339666..7342957
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AA seq
390 aa
AA seq
DB search
MVQSGGNMALVGRLGAKCCRSLLFEPFKGRLRGVLATGGIQSCVVAKRHLLSEDVIKLQD
FQQRKLAVAHLVTGEEGNFVELFRQKLKRNELVLRDELKLLLHLCQSLDDMAVARDAIYR
YHAENRNLLYGDFKFGPLYMRLCYEFGLEEMAASALIDKNLKGFFIDTTSFNIAIDMLFI
KGLYERALEVLKSMRSQGLQFNKDTLTLAAGTCYKLNTVESYRICTALIEEEQTKGHFIP
RHAFCFAIALALRQKDIEKAKSLFAQIMNTESKMCQNLKVATLAMSGEIADAVTLLSAAF
LPKSPYFIKKTEFSQEVVDLLHLHSEGGPHHSKVRQIVTQLERASQVTPQTLDDMLCHAP
MGKRRQAPMGGQRRTSRRTLKPLKSALSTE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggtacagtccggaggcaatatggcgctcgtcgggagattgggagctaaatgttgtcgg
tcgttgctgtttgaacctttcaaaggacgtttacgaggagttttagccacgggcgggatt
cagagctgtgttgtggctaagagacatcttctgtcagaagatgtcatcaaactgcaggac
ttccagcagaggaagctggctgtggctcatcttgtcactggagaagaaggtaattttgtc
gagcttttcagacagaaattgaagagaaatgagctggttctgcgggacgagctgaagctc
ctccttcacctgtgccagtctttagatgacatggcggtagccagagatgccatttataga
tatcatgcagaaaaccgtaacttgctgtacggagacttcaagtttggtcctctttacatg
agactgtgctacgagtttggcctggaagaaatggctgcttctgcactaatagataagaat
ctgaaaggatttttcatcgacacaacctcttttaacattgcaattgacatgttattcatt
aaaggcttgtatgaacgagcccttgaggtcctaaaaagcatgaggagccaaggcctccaa
ttcaacaaagatactttaactcttgcagctggtacctgctataagctgaacacggtagag
tcgtaccggatctgcaccgctttgatagaggaggagcagaccaaaggccacttcatccct
cggcacgcattctgcttcgccatagctttagctctgcgacagaaggacatcgaaaaagca
aagtcgctgtttgcacaaattatgaacacagaaagcaaaatgtgccaaaatcttaaggtg
gcaacactagctatgtcaggggaaattgcagatgccgttaccttattatcagcagccttc
ttgcccaaaagtccatattttattaaaaaaacagagttctcgcaggaagttgtggattta
cttcatctacatagcgaaggtggacctcatcactcaaaagtgagacagatagtgactcaa
ctcgagcgagcctctcaggtgactccgcagaccctcgacgacatgttgtgccacgcaccc
atggggaagaggagacaagcgcccatgggcgggcagaggaggaccagccgaaggactctg
aagcctctgaagtccgctctgtctacagagtga
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