Oryzias melastigma (Indian medaka): 112136175
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Entry
112136175 CDS
T07439
Symbol
arvcfa
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome homolog
KO
K28154
splicing regulator ARVCF
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112136175 (arvcfa)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112136175 (arvcfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
HEAT
V-ATPase_H_N
Atx10homo_assoc
Arm_2
Motif
Other DBs
NCBI-GeneID:
112136175
NCBI-ProteinID:
XP_024113546
Ensembl:
ENSOMEG00000003081
LinkDB
All DBs
Position
LG12:12793308..12811391
Genome browser
AA seq
862 aa
AA seq
DB search
MPAEVKEDQSLEELPPFTPSHKAKESNQENPTATDELDTPTSIASVMTSTNESSTETDTP
HQTDTEDSKVLEQESEKTPSETQENPESVHAPGKSHSALLSEAPENASTQQPASEPNAEA
CESVTPTTTATGAATTNPQPQQVVPAAESPTDAHSRVYTLPDAFRGVRSDLYPGYGSLSR
FSLHGYLPTKNFQPGAHYTLPFLRDSYTPTCMSNQTEEDRENLLDKKSDDSAAGYQTLGG
IHQFRPITTMELFREPSRTRSGYDEAFMAQLEGTLNPFFQAMCRAQTLQIPHKRSSMVSL
DSIRRDPRWRDPNLHEVISMLSHPLDPVKSNAAAYLQHLCYENDRIKQEVRQLNGVPILV
ALLDHPKAEVHRKACGALRNISYGKDHNNKIAIKNCGGIQALVRLLRKSSSMEVKELATG
TLWNLSSHEPLKMLVINQGLQTLTDEIIIPHSGWRRRDSADPSKLQSAEWTTVFKNTSGC
LRNVSSDGAEARQRLRECEGLVAALLHALQSAVINKDTDNKSVENCVCILRNLSYHVHKE
VPGTERLQEPNACHLRSVGLQKKKTEPDSLAGKRPKEEWFTQGLELLYQPEVVRLYLSLL
TCSHNHNTLEAAAGALQNLAAGQWAWSNYIRVTVRKEKGLPVLVELLRSDVDKVVRAVAI
ALRNLAIDKRNKELIANYALRELVGNLPCGQQHPAKNLEGDTVVSILNTIHEIITDSPEN
ARALVQCQAVQKLVAINKSSQSTRETKAASHVLQTIWSFKELRNSLIKAGWNKSHFKPTT
SGAAKKSKSGKQGGDDITSPLMDKNQDVYSTLEPNGRAGDGKGPAVERDALQATSERKHF
IRAGRPAVGLMDNKPPPLDSWV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaagtgaaggaggatcaaagtctggaggagctgcctccattcactccatca
cacaaggcaaaagagtcaaaccaggaaaacccgaccgctacagatgaactggacacgccc
acttccatcgcttcggtgatgacctccaccaacgaaagctccacagaaactgacactcca
caccagacagacaccgaggattccaaagtgttggagcaagagagtgaaaagaccccgagt
gagacgcaagaaaacccagagagcgtccatgctccaggaaaatctcattctgcgttactt
tctgaggctccggaaaacgcttccactcagcagcctgcgtccgagccaaatgctgaggcc
tgtgaatctgtcacaccgaccacaacagccaccggcgccgccacaacaaacccacaacct
cagcaagtggtgccggctgctgagtcccccacagacgcccacagcagagtgtacaccctc
cccgacgccttcaggggcgtacgaagtgacctttatccaggatatggaagtctttctcgc
ttcagcctccatggctacctgcccaccaaaaacttccagcccggcgctcactacaccctc
cccttcctcagagacagctacaccccgacgtgcatgagtaaccaaacggaggaggacaga
gagaacctgctggacaagaaaagcgacgactcagctgccggttaccaaacgttgggagga
atccaccagtttaggcccattaccaccatggagctgttcagggagccctccaggaccaga
agtggctacgatgaggccttcatggcccagctggaaggcaccctgaaccctttcttccag
gccatgtgccgcgcacagactctgcagataccccacaagcgcagcagcatggtgagcctg
gacagcattcgaagagacccccgctggcgagaccccaacctacacgaagtgatctcaatg
ctcagccaccccctggaccccgtcaagtccaacgcggcggcctacctgcagcacctgtgt
tacgagaacgacaggatcaagcaggaggtccggcagctgaacggggttcccattttagtg
gcgttgctggaccatcctaaggctgaggtccatcgcaaggcctgtggggcattgcgcaac
atatcatatgggaaggaccacaacaacaaaatagccatcaagaactgtggtggcatccaa
gctttagtccgactgctgaggaagtccagcagcatggaggtcaaagagttagccacaggg
actctgtggaacctttcctcgcacgagcctctcaagatgctggtcatcaaccagggactc
caaacgctgacggatgaaatcatcatcccacactcaggctggaggaggagagactcggcc
gacccctcaaagctgcagagcgccgagtggaccaccgtctttaagaacacatctggatgt
ctgaggaacgtcagctcggacggggcagaagctcgacagagactgagggagtgtgagggg
ctggtggcagcgctccttcatgccctgcagtcagccgtcatcaacaaggacacagacaac
aagtcggtggagaactgcgtctgcatcctccgaaatctgtcctatcacgttcacaaagag
gtacctggaactgagcggctgcaggagcccaacgcttgtcatctgagatcagtgggtctc
cagaagaagaaaactgagccagacagccttgcaggaaaaagacctaaagaggagtggttc
actcaaggtttggagctgctgtaccagccggaggtggtgcggctctacctctcccttctc
acctgcagtcacaaccacaacaccctggaggcagctgcaggagcactgcagaacctcgct
gcaggacaatgggcttggtccaactacattcgggtgacggtcagaaaagagaaagggttg
cctgttctggtggagctgctgcggtcagacgtggacaaagttgtgcgagccgtggccatc
gctcttcgcaacctcgccatcgacaaacggaataaagaactaattgccaactatgccctg
agggagctcgttggtaatttaccatgtggccaacagcaccctgcaaagaacctggagggt
gacacggtggtgtccatcctgaacacgattcatgagatcatcacggacagccctgagaac
gctcgagcacttgtgcagtgtcaagctgtgcagaagctggtggccatcaacaagtcgagc
caatccacacgagagaccaaggcagcctcccatgtcctccagacgatatggtccttcaag
gagctgaggaactcgctcatcaaggcaggatggaacaagagccactttaagccaacaacc
agcggagcggcaaaaaaatccaagagcggaaaacaaggcggtgatgacatcacctcacct
ctgatggacaaaaaccaagatgtttactccaccttagaaccaaatggcagagctggagat
ggaaagggacctgcagtggaaagagacgcacttcaggcgacaagtgagaggaaacacttc
atccgagctggcaggcctgcagtgggcctcatggacaacaaacctccgccgctggactct
tgggtgtag
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