KEGG   Oryzias melastigma (Indian medaka): 112136187
Entry
112136187         CDS       T07439                                 
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:oml03016]
    112136187 (pus1)
Enzymes [BR:oml01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     112136187 (pus1)
Transfer RNA biogenesis [BR:oml03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    112136187 (pus1)
 Prokaryotic type
    112136187 (pus1)
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-GeneID: 112136187
NCBI-ProteinID: XP_024113574
Ensembl: ENSOMEG00000022655
LinkDB
Position
LG12:15534583..15536877
AA seq 419 aa
MLKVRILFSALIDCRQTLDRNGALFKFMCTMSEAPTDQQTAKLLKRTNEQSGESAEGDNK
RLKVDQEQTENERKYPKKKVALLLAYSGKGYYGMQRNPGNSQFRTIEDDLVSALVKSGCI
PGNHGDEMKKMSFQRCARTDKGVSAAGQVVSLKLWLIEDIVEKINEHLPPQIRVLGLKRV
TQGFNSKNNCDARTYSYMLPTVAFSPKDYDAGNVSSFRLETETLQRVNRLFSLYKGTHNF
HNFTSQKAPNDPSARRYITEMSCGEPFIRNDHEFAVINVRGQSFMLHQIRKMIGLVIAVI
KGYAQEKVIERSWKEEKVDVPKAPGLGLVLEMVHFDRYNKRFGGDGLHERLEWDHEADAI
KAFKEAYIYPTIVETEIEEGSMVSWMSTLPIHDFEATAAETRNSNDQKQLIEEEGNNSD
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgcttaaagtccgaatactgttcagtgccttgattgactgcagacagactctagaccgg
aacggtgctctttttaagtttatgtgcacaatgagtgaagctcctacagaccagcagaca
gctaagctgctgaaaaggaccaacgagcagagtggagagtctgcagaaggagacaacaaa
agacttaaagttgatcaagaacaaacagaaaatgaaaggaaatatccaaagaaaaaagtg
gctttactccttgcttactctgggaagggatattacgggatgcagagaaaccctggaaac
tcccagttcaggaccatcgaagatgacctggtttctgctctcgtcaaatctggttgcatt
cctggtaaccatggtgatgagatgaagaaaatgtcctttcagagatgtgccaggacagac
aagggcgtgtctgctgcgggacaagtggtttcccttaaattgtggctgattgaagacatt
gttgaaaaaattaatgaacatttgccaccacagatcagggtacttgggcttaaacgtgtg
acccagggtttcaactccaaaaacaactgtgatgctcgaacctactcctatatgcttccg
actgtggccttttctccgaaggactacgacgcaggaaatgtgtcatcctttcgcctggaa
acagagactcttcagagggtgaaccggcttttttccctttacaaaggcactcataacttc
cacaacttcacctcccagaaagctccaaacgacccgagtgcccgccgctacatcaccgag
atgtcctgcggagaacctttcatccgcaacgaccacgagtttgctgtgataaatgtgcga
ggtcagagcttcatgctgcaccaaatccggaagatgatcggcttggtgattgcagtgatc
aagggctatgcgcaggagaaggtgatagagaggagctggaaggaggaaaaggtagatgtc
ccgaaagctccaggactcggtctggttcttgaaatggttcactttgaccgttacaacaag
cgcttcggaggggacggcttacacgagcgtctggagtgggatcacgaggcggacgcgatc
aaagcctttaaggaagcttatatctaccccacaattgttgagaccgagattgaggagggc
tccatggtcagctggatgtccacactcccaatccatgacttcgaagccacagctgccgaa
acacgcaacagtaatgatcaaaaacagctcattgaagaggagggaaacaactctgattag

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