Oryzias melastigma (Indian medaka): 112136315
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Entry
112136315 CDS
T07439
Symbol
irx4b
Name
(RefSeq) iroquois-class homeodomain protein IRX-4b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112136315 (irx4b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112136315 (irx4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
112136315
NCBI-ProteinID:
XP_024113701
Ensembl:
ENSOMEG00000013378
LinkDB
All DBs
Position
LG11:1050703..1056134
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AA seq
370 aa
AA seq
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MAYSQLGYPYSSAPQFLMSPGSLAGPPPSQPVLRTQSNQLAPGVYSSPYQKSQSYYNTCS
GDASTVYARGPVDPKEAAPGGPTQTPTYYPYEYTFGQYPCERYGYSCSDSSSRRKNATRE
TTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTWSPRA
CKSSDDRGCEDDSDEAERPLKSDNDLPDPPCADLQSDLEDFDLLESDASDGDGKLQFQPD
VDINPPHRQPPKERPSELSAVEPRSSSFYVNEELKNSTTKPKIWSIAHTARSVESSAQPE
YSSCMLLSSGSSSPGFPTNMALSKAERQQESAVATLREWVDGVFHGPPFQQLKAADRWKS
RTAAQTFQLS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcgcagctgggatacccctactcctccgcacctcagtttctgatgagtcct
ggctccctggctggacctcctccatcccagccggtgctgcgcactcagagcaaccagctg
gctccaggagtctacagcagcccctaccaaaagagccagagttactacaacacttgctct
ggagacgcctccactgtgtatgccagaggaccagtggaccccaaagaagctgcacctggg
ggcccaacccagacccctacttactatccctatgaatatacatttggacaatatccttgt
gaaagatacgggtattcctgttcagacagctcttctcgccgtaagaatgccacccgcgag
accaccagcacgctgaaagcttggctacaggagcaccagaaaaacccctacccaaccaag
ggggagaagatcatgctcgccatcatcaccaggatgactctcacgcaggtgtccacatgg
ttcgcaaacgctcgcaggaggttgaaaaaggaaaacaaggtgacttggtcgccacgagcg
tgtaagagctccgatgaccgcggttgtgaagacgacagcgatgaagctgagaggccatta
aaaagtgacaacgatcttcctgatccgccgtgcgcagacctgcagagcgacctggaggac
ttcgacctgctggagtctgacgcttctgatggagacggcaagctgcagtttcagccagac
gttgacataaaccccccacacaggcaaccccccaaagagaggccgtcggagttatccgca
gtagaaccccggagcagctctttctatgtgaacgaggagctgaagaactcaaccaccaag
cccaaaatctggtccatagctcacaccgccaggtctgtggagagcagcgctcagcctgag
tactcgtcctgcatgctgctgtcgagcggctcctcctcgccggggttccccaccaatatg
gcgctcagcaaggcggaaaggcagcaggagtcggcggtcgccacgctgagagagtgggtg
gatggagttttccacgggcctcccttccagcagctgaaagctgcagacagatggaagagc
aggacagcagcacaaaccttccaactctcctag
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