Oryzias melastigma (Indian medaka): 112136356
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Entry
112136356 CDS
T07439
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112136356
03041 Spliceosome [BR:
oml03041
]
112136356
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112136356
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112136356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_Vigilin
Secretin_N
PSD4
Motif
Other DBs
NCBI-GeneID:
112136356
NCBI-ProteinID:
XP_024113769
Ensembl:
ENSOMEG00000007725
LinkDB
All DBs
Position
LG13:25440491..25483589
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AA seq
556 aa
AA seq
DB search
MAELQASSSQPGLKADGLADVIQRARQMVGKIGGENMPHLNSSSGSVEPSLYYQKRGGED
GVGNQLPAMGHQSRVITEDYKVPDRMVGFIIGRGGEQITRIQLESGCKIQIAADSGGLME
RPCSLTGTPESIEQAKRLLVQIVERCRNGPGFHGDGEGGTSVQEMLIPASKVGLVIGRGG
DTIKQLQERAGVKMMMIQDGPMPTGADKPLRISGDPYKVQAARELVLEVIREKDGDFRSG
RSDFGVRLGGTSLDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKTDDGISPERVAMV
MGQPDRCQHAVHLINDLIQTAQERDGFGSTLRSGRVRGRGDWTMGSPGPLQEVTYTIPAD
KCGLVIGKGGETIKSINQQSGAHVELQRNPPPSTDPNTRVFTIRGTAQQMEVARQLIDDK
IGGSGIVSNGGFGFSAFTQGPTAHQNCGSGQTFLTGVWGNTYQTSWQNPGQQDPGHSLAQ
TGQMDYSKAWEQYYKKLGQQNQPQSVMTDYSKAWEDYYKKQSQSSQQSSVPDYTAALAEY
YRQQPYLWNPAQIQDH
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgcaggcctcctcgagccagccggggctgaaggctgacggcctggccgat
gtcattcagagggcccggcagatggtgggtaagattggtggagaaaacatgccccacctc
aacagctcctcaggaagcgtggagccctctctgtactaccagaaacgaggcggagaagat
ggagtaggtaaccagctaccagccatgggccatcaaagcagagtcatcacagaggattac
aaggttccagacagaatggtgggcttcattattggtcgaggaggagaacagatcacacgg
atccagctggaatcggggtgtaagatccagatagcagccgacagcggcggtctgatggag
cggccgtgttcgctgactggaactccagagagcatcgagcaggcaaagcgactgcttgtc
cagatcgtggagcgctgcaggaacggccctggtttccacggcgacggcgagggcgggacc
tctgtgcaggagatgctgatcccagccagcaaagtggggctggtgatcggccgaggagga
gacaccatcaagcaactgcaggagcgagccggggtgaagatgatgatgatccaggacggc
cccatgcccacaggagccgacaagccgctgcgcatctcaggcgacccctacaaagtgcag
gcagcacgggagctggtgttggaggtgatccgagagaaggacggggacttcagatcggga
cgcagcgactttggcgtccgactgggaggaaccagcctggacgttcctgttcccaggttt
gccgttggcatcgtgatcggcagaaatggagaaatgatcaagaagatccagaacgatgct
ggagtccggatccagtttaagacggacgacggcatcagtcctgagcgtgttgccatggtg
atgggtcagccagaccgctgtcagcacgccgtccacctcatcaacgacctgatccagacc
gcacaggagcgtgacggcttcggctccaccctgcgcagtggtcgggtcagaggtcgcggt
gactggacaatgggctctccaggtcctctccaggaagtaacctacaccattcctgctgac
aagtgcggcctggtcatcgggaaaggtggagaaaccataaagagcataaaccagcagtct
ggagctcacgtggagctgcagaggaacccacctccctccaccgaccccaacacgcgggtc
ttcaccatcagaggcaccgcccagcagatggaagtggcccgtcagctcatcgatgacaag
atcgggggctcaggaatcgtgagtaacggaggttttggcttcagcgctttcacccagggc
cccaccgcacatcagaactgtggcagcggtcagaccttcctgactggagtttgggggaac
acctaccagaccagctggcagaaccctggacaacaagatccaggtcacagtttggctcag
acaggacagatggactactccaaagcatgggagcagtactataaaaagttaggtcagcag
aaccagccgcagagcgtgatgacggactacagcaaagcgtgggaggactactacaagaaa
cagagtcagtcttcccagcagagttcggtgccagactacactgcagcgttagcagaatac
tacagacagcagccctacctgtggaaccccgcccagattcaggatcactaa
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