Oryzias melastigma (Indian medaka): 112136360
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Entry
112136360 CDS
T07439
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112136360 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112136360 (ppil2)
03110 Chaperones and folding catalysts [BR:
oml03110
]
112136360 (ppil2)
04121 Ubiquitin system [BR:
oml04121
]
112136360 (ppil2)
Enzymes [BR:
oml01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
112136360 (ppil2)
Spliceosome [BR:
oml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112136360 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
112136360 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
112136360 (ppil2)
Chaperones and folding catalysts [BR:
oml03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
112136360 (ppil2)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
U-box type E3
112136360 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
FOXO_KIX_bdg
Type_III_YscX
Motif
Other DBs
NCBI-GeneID:
112136360
NCBI-ProteinID:
XP_024113778
Ensembl:
ENSOMEG00000009294
LinkDB
All DBs
Position
LG9:complement(833947..845063)
Genome browser
AA seq
524 aa
AA seq
DB search
MGKRQHQKDKMYITCTEYTNFYGGKRNEIPQANFRRLPFDHCSLSLQPFEYPVCTEDGVV
FDLLSIVPWIKKYGTNPISGEKLEAKSLIKLNFAKNSDGKFHCPVLYNVFTNNSHIVTNK
VTGNVFSYEAVEQLNIKTKSFKDLLTDEPFTRKDIITLQDPTNLDKFNVSNFFHVKNNLK
VLDPDEEKAKQDPAYHLKSTNLETRETLAELYKEYKGDQLLASTMKEPEAKKTDKLNAAH
YSTGRVSASFTSTAMTPSTIHEADAIADDAVRYQYVKKKGYVRLHTNLGDLNLELHCDKV
PKAGENFIRLCKKGYYDETIFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCTHLDRKHTVFGRIVGGFETLTAMENVVCDPKTD
KPKTEIKLVSTTVFVDPYEEADAQIAAEREKERQKQQEEAQQANVNLKKAKEEQKPKTFK
EGVGKYINPASSKRSAPEDDAPSTSGGGAKKPKGKAGFGDFSSW
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagacaacaccaaaaagataaaatgtacatcacatgtacagaatatactaac
ttctacggggggaagaggaacgaaatcccacaagcaaatttccggaggcttccgtttgac
cactgcagcttgtcgctgcagccgttcgagtatcctgtctgcaccgaggacggcgtcgtg
ttcgacctgctgagcatcgttccatggataaagaagtatggaactaatcccatctctggg
gagaaactggaagcaaagtctctgattaagctcaactttgcaaagaacagcgacggaaag
tttcactgtccggttctctacaacgttttcacaaacaactctcacatcgtgaccaacaag
gtgacggggaacgtcttctcttatgaggctgtggagcagcttaacatcaagaccaagagc
tttaaagacctgctgacagacgagcccttcaccaggaaggacatcataaccctgcaggat
ccaacaaacctggataaattcaacgtctccaacttcttccacgtgaaaaacaatttaaaa
gttctggatccagacgaggagaaggccaagcaggacccggcgtaccatctgaagagcacc
aacctggagaccagggagaccttagccgagctctacaaggaatacaaaggagaccagctg
ctggcgtccaccatgaaggagcccgaggccaagaagacggacaaactcaacgccgcccac
tactcaacaggcagagtttctgcctctttcacctctacagccatgactccttcaacgatc
catgaggccgacgccatcgccgacgacgctgtgcgttaccagtacgtgaagaagaaaggc
tacgtccgcctgcacaccaacctgggagacctgaacctggagctgcactgtgataaggtt
cccaaggccggagagaacttcatccgtctgtgtaagaagggatactacgacgagaccatc
ttccacagatccatcaggaacttcatgatccagggaggagacccgaccggcaccggcaca
ggaggagaatccttctggggaaaacccttcaaggacgagttccggcccaacctgtcccac
acgggccggggggtcctcagcatggccaactcgggtccaaacaccaacaagtctcagttc
ttcatcacattccggtcctgcacccacctggacaggaagcacaccgtatttggaagaatc
gtcggtgggtttgagacgctcacggccatggagaacgtagtgtgtgatcctaaaacggac
aagccaaagacggagatcaaactcgtgagtacgacggtgtttgtggatccgtacgaggag
gcggacgctcagatcgcagcagagcgagagaaggagcggcagaagcagcaggaggaggcg
cagcaggctaacgtcaacctgaagaaagccaaggaggagcagaaacccaagaccttcaag
gagggagtgggcaaatacatcaaccccgcctcctcgaaacgctcggctcctgaggacgac
gccccgtccaccagtggaggcggagccaagaagcccaaagggaaggccggctttggagac
ttcagctcctggtag
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integrated database retrieval system
