Oryzias melastigma (Indian medaka): 112136372
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Entry
112136372 CDS
T07439
Name
(RefSeq) STAM-binding protein-like A
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112136372
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112136372
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112136372
04121 Ubiquitin system [BR:
oml04121
]
112136372
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112136372
Peptidases and inhibitors [BR:
oml01002
]
Metallo peptidases
Family M67
112136372
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Others
Others
112136372
Ubiquitin system [BR:
oml04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
112136372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_dimer
JAB
Prok-JAB
DUF648
Motif
Other DBs
NCBI-GeneID:
112136372
NCBI-ProteinID:
XP_024113805
Ensembl:
ENSOMEG00000009315
UniProt:
A0A3B3BRE1
LinkDB
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Position
LG9:complement(846237..851614)
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AA seq
428 aa
AA seq
DB search
MADHTDVRLPPEERVRALTKKGSTVEVNDDVPPRRYFRSGMEMIRMANIYTEEGNVEHAF
VLYNKYITLFIEKLPKHRDYKTANIPEKKDTLKKLKDVAFPQAEILKKALLRRFEEEHAQ
YLIKKKAQEEAMALEQSRQRAMDAERERVADMQRRQREQEQFSAFEEMIRRQELEKERQR
VLLEFATPAVPAPDTPLIPGIQGPPLVSPTAPQSPGDLSGNYRQPVTTGTPGPPTFDRSL
KPGSLVSPENNNSMVDALRQLAVPAEVCRSFLRLAEANTSRAVETCGILCGKLTRNAFTV
THVIVPKQCGGPDYCDTENEEELFLIQDQYDLITLGWIHTHPTQTAFLSSVDLHTHCSYQ
IMLPEAIAIVCSPKFNEIGYFRLTDRGTDEISTCKQKGFHPHSKDPPLFTHAAHVTITSD
SVSVMDLR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccacaccgacgtcaggctgccgccggaggagcgcgtccgcgccctcaccaag
aaagggagcacggtggaggtaaacgatgacgtcccgcctcgccggtacttccgctcgggc
atggagatgatccgcatggccaacatctacacggaggaggggaacgtggagcacgccttc
gtcctgtacaacaaatacatcacgctcttcatcgaaaagcttccgaagcatcgggactac
aagacggccaacattcccgaaaagaaagataccttgaagaaactgaaggacgtggccttt
cctcaggcggagattctgaaaaaggctcttctgaggagatttgaagaagagcatgctcag
tatctgatcaagaagaaggcgcaggaggaggccatggcgctggagcagtccaggcagcgc
gccatggacgccgagcgcgagcgtgtggccgacatgcagcggcggcagcgggagcaggag
cagttcagcgccttcgaggagatgatccgccgccaggagctggagaaagaacgccagcgg
gtgctgctggagttcgccacgccggccgtgcccgctcctgacacgcccctcattccaggc
atccagggccccccgctggtctctcccaccgcgccgcagagtccgggagacctttcggga
aactaccggcaacccgtgaccaccggcacgccgggcccgcccaccttcgaccgctcgctc
aagccgggctctctggtcagccccgagaacaacaactccatggtggacgcgcttcggcag
ctggccgttcctgccgaggtctgccgcagcttcctgaggttagccgaggctaacaccagc
cgcgccgtggaaacctgcggcatcctctgtgggaaactgaccagaaacgcgttcacggtg
actcacgtcatcgtcccgaagcagtgcggcgggccggactactgcgacacggaaaacgag
gaggagctcttcctcatccaggaccagtacgacctcatcacgctgggctggatccacacc
caccccacacagacggccttcctgtccagcgtggacctccacacccactgctcctaccag
atcatgctgccggaggccatcgccatcgtctgctcgccaaagttcaacgagatcggttac
ttcaggctgacggaccgcggaaccgacgagatctccacgtgtaaacagaaaggcttccac
ccccacagcaaagacccgcctcttttcacgcacgccgctcacgtcaccatcacctcggac
agcgtgtctgtgatggatctgcgctga
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