Oryzias melastigma (Indian medaka): 112136435 Help Entry 112136435         CDS       T07439                                  Symbol brip1 Name (RefSeq) Fanconi anemia group J protein   KO K15362   fanconi anemia group J protein [EC:5.6.2.3] Organism oml  Oryzias melastigma (Indian medaka) Pathway oml03440   Homologous recombination oml03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:oml00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     112136435 (brip1)    03460 Fanconi anemia pathway     112136435 (brip1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:oml03400]     112136435 (brip1) Enzymes [BR:oml01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      112136435 (brip1) DNA repair and recombination proteins [BR:oml03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      112136435 (brip1)    FA (Fanconi anemia) pathway     Downstream FA components      112136435 (brip1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Helicase_C_2 DEAD_2 DEAD HBB Motif Other DBs NCBI-GeneID:  112136435 NCBI-ProteinID:  XP_024113902 Ensembl:  ENSOMEG00000010919 LinkDB All DBs Position LG13:complement(33572818..33702315) Genome browser AA seq 1382 aa AA seqDB search MASSAVEYTIGGVKIRFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCST LAWQRAQFDKMQDGGCAGNKSPSEKSSGDCKKPETPTPCLCECHRRTSQASAAAPNGVMD LMVSPCKASPQPSHAVPKHEPSPAETQARKASIASCLSGKLQASLNSNGNREDDFKPDRK RIRSAEHRSQKRPRLQNGVIFIDDEPELEVEPSGFQADTPNNQGASSCCVSEPCSCCPCA STKDAAKKQDKDNRKRIPKIFFGTRTHKQITQIAHELKRTVYSSVHMTILSSRDHTCVNP EVVPHFNRNERCKDLLEAKNGKSCRYYHGVQKMRDHHTLQIVHGLHEAWDVEELVTVARR LRSCSYYAARELMQGASIIFCPYNYLLDPMIRESMEIDLAGQILVLDEAHNIEDCARESA SFSLDQSSLKMCREEVDSMVNNNIRRSQHEPLRDFCYTLFNWIQECQVLLSERGYESASK VWSGTDMLGIFYGLGITADTFRILKQNFAAVLEKEERAGLVNGKEDMVQVPTISSTTSTV LKNLFMVLDFLYRDNCRFAEDYKVALQRSYAWTNQVPPDVPDAQGFLVRPRPRHRQNARV KTEVLTLSFWCLNPAVAFSDLSGSVHSIVLTSGTLSPMSSFSSELGVKFSIQLEANHVIN KSQVWVGTVGAGPQGKKLRATFQHTETYAFQDEVGDLLLHVCKVMTKGVLCFLPSYKMLD KLRDRWSNTGLWEKLEQQKTVITEPRGGAKGDFDELLQTYYDAIKYCDERDGALLIAVCR GKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQYCKSRGLLPGHRWYEIQAY RALNQALGRCIRHKNDWGALILVDERYRSNPNKYITGLSKWVRQLVQHHYTFSNAMQSLA AFSRVQENVEMASTDCLTLSSINSSLSNNSSAQAGGQSLLKAPEVQISSLSATPPKLQQE TSTLLSPSVLSAQFKSENNQTAESLKIPRSPPAEQIPHQSRTSKPYYRIFTPRATDTGFK KPIFISKIPSSSQHEILQAPPLPMTSETFCQKQEAEICSGEISGEPADLCAELPMLASSE DETPPATTSDEDEEDQSIFFTPELFEVEEDAESSQVNLNTKPVSKTPPIMGSPEKLSEDT PRLASAWNDQSRRGLELTQEQGAEVRRQEQSQKLEEVETPGRQAGSRLHRLSRSRQKLTS TQTAVKVRRLYRQKDRRTSSTKIFDVLRPCFRGLYCAVCEKELLPDAQGIVRRSAYAFKQ LAILQRDHGPAFLTRRCQCSPLQPSVSGDFLLVVQNPSALKTLETTLQPDSVNSFTLYNA IWNPEEESVTRYLQCKGCCSQLPGLPAALIAAEILYPRNMAQSQIWLAPAAVTLCALIPA EN NT seq 4149 nt NT seq  +upstreamnt  +downstreamnt atggcttcgtctgcggtggaatataccatcgggggagtcaagatccgctttccctgcaag gcctatccctcccagctggccatgatgaattccatcatccggggcttgaacaatgggcag cactgtctcctggagagtccgactggcagtggaaagagtttggccctcctctgctccact ctggcctggcaacgggctcagtttgacaaaatgcaggatggaggctgcgcggggaacaaa agtccatcagaaaaatcctcaggagactgtaagaagccagagacccccaccccatgtctg tgtgagtgtcacagaaggaccagccaggcttcagctgctgcccccaatggtgttatggac ctcatggtgtctccctgcaaagcctctcctcagccatcacatgcggtgcctaaacacgaa ccatcaccagcagagacacaagccagaaaagcttccatagcatcttgtttgtcaggaaag ctccaggcatctctgaactccaacggcaaccgagaggacgactttaaacccgacaggaaa cgcatccgttctgcagagcacaggagccagaagagaccgcggctgcagaatggagttatt ttcatagatgatgaaccagagctggaagtggagccatctggttttcaggctgacacccct aacaaccagggagcttcatcatgctgcgtctctgaaccctgctcctgctgcccctgcgct tcaaccaaagacgccgccaaaaaacaggacaaagataacagaaagaggattcccaagatc ttctttggcactcgcacgcacaaacagataactcagatcgcacacgagctgaagcgcact gtgtactccagcgtgcacatgaccattctatccagcagagaccacacctgtgtcaaccct gaagtggtaccacacttcaaccggaatgagcgctgcaaagatcttctggaggccaaaaat ggaaaatcctgccggtactaccacggtgttcagaagatgcgtgaccaccacacactacag atagtccacgggctccatgaggcctgggatgttgaagagctggttactgtcgccagacgt ctccgatcgtgttcctactacgctgctcgtgaactcatgcagggagcgtccatcattttt tgcccgtacaactacctgctggatccaatgatcagagagagtatggaaatagacctggca ggacagattttggtcctggatgaagcccacaacattgaggattgtgcaagggaaagtgcc agcttcagtctggaccagagcagtctgaagatgtgcagagaagaggtggacagcatggtc aacaacaacattagacgctcccaacacgagcctctcagggacttctgctatactctcttc aactggatccaggagtgccaggtcctgctgtctgagcgtggatatgaaagtgccagtaaa gtctggagtggaacagacatgctgggcatcttttatggtctgggcatcacagctgacacc ttcaggattcttaagcaaaattttgcagcagttttggaaaaggaggagcgtgcgggcttg gttaatggaaaggaggacatggtgcaggttccaaccatcagctcaactacgtccactgtc ctgaaaaacctcttcatggtgctcgacttcctgtacagggacaactgccggtttgctgaa gattacaaagtagctcttcagaggagctatgcatggaccaatcaggtcccgcctgatgtc cccgatgcccagggctttttggttcggccccgaccacgacacaggcagaatgccagagtc aagactgaggtcctgacgctgagcttctggtgcctgaaccccgcagtggctttctctgac ctgagcggctcagtgcacagcatcgtgttgacatcaggaacgctgtcacccatgagctcc ttctcctctgaactgggggtgaaattttccatccagcttgaagccaaccatgtcatcaac aaatcccaggtttgggttggaacggttggtgctggaccccaaggaaagaaactgcgtgct acttttcagcacactgaaacatatgcgttccaggatgaggtgggtgacctgctgctccac gtctgcaaggtcatgaccaaaggggtgctctgctttctgccttcatacaagatgctcgac aagctgagagaccgatggagtaacacgggtctgtgggagaagcttgagcaacagaagact gtgatcacagagcctcgtggtggagccaagggagattttgatgagctgcttcagacttat tacgatgccatcaaatactgtgatgaaagagacggtgccctgctcattgctgtgtgcaga ggaaaagtcagtgaagggctcgactttactgatgacaatgccagagcagtggtgaccatt ggaattcccttcccaaacatcaaggacctccaggtggaactgaagatgaagtacaatgac cagtactgcaagtccagaggtcttcttccaggtcatcgctggtatgagatccaggcgtac agagctttgaaccaagccctgggaagatgtattcgccacaagaatgattggggtgctctg attctcgtggatgagcgatacaggagtaatcccaacaagtatatcacaggcttgtctaaa tgggtccgtcagcttgttcagcatcattacaccttcagcaatgccatgcagtctttggca gcattctctcgagtccaggagaatgtggagatggcctccacagattgcctgaccctcagc tccatcaactcatctctcagcaataactcgtcagcacaggctgggggacagagtttgctc aaggctccagaagtccagatatcttctttgagtgccacaccccccaagctccaacaggaa accagcacattgctctccccgtctgttctgtctgcacagttcaagagtgaaaacaaccaa acagcagaatcactgaagattccacgcagtcccccagcagagcagattcctcatcaaagc aggacatcaaaaccttattatcgcatattcaccccccgcgccacagacaccggcttcaag aaacccatcttcataagtaaaataccctcctccagtcagcatgagatcctccaggcgcct cctctaccgatgacgtcagagaccttttgccagaagcaagaagcagaaatctgctcaggt gaaatcagtggagaacctgcagatctgtgtgcagagctcccaatgctggcttcgtctgaa gacgagacacccccagccaccacctctgatgaggatgaggaggaccagagcattttcttt accccagaactgtttgaggtcgaggaggacgcagaaagttctcaggtgaatctgaacaca aagcctgtctccaagacccccccaatcatgggtagcccagaaaagctgtcggaagacacc cccaggttagcttctgcttggaatgaccaaagcaggaggggcttagagcttactcaggaa cagggagctgaagtcagacgacaagagcaaagccagaagctagaggaggtggaaacaccc ggcagacaggcaggaagtagacttcacaggctatccaggtccaggcagaagctgacctcc acccagacagctgtgaaagtgaggaggttgtacagacagaaagacaggaggacttcttca acaaagatctttgatgtcctgcggccgtgcttcaggggtctttactgcgctgtttgtgaa aaagagcttcttcctgatgcacaaggtatagtacggcgttctgcgtatgcattcaaacag ctagccattctacaaagagaccacggtcctgccttcctgacccgtcgctgccagtgctca cctctgcagccgtcagtttcaggggactttctgctcgtggttcaaaacccctcagcactg aaaactctggagacgactctgcagcctgacagcgtcaactctttcactctgtacaatgcc atctggaaccctgaagaggaatctgtgaccagatatctgcagtgcaaaggctgctgctcc cagcttcctggtctgcctgctgcgctgatagcagcagagatcctctaccccagaaacatg gctcagagtcagatatggttggctccagcagcagtcaccctctgtgcgctcattccagct gaaaactga

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