KEGG   Oryzias melastigma (Indian medaka): 112136451
Entry
112136451         CDS       T07439                                 
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112136451
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oml01009]
    112136451
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oml03400]
    112136451
Enzymes [BR:oml01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     112136451
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     112136451
Protein phosphatases and associated proteins [BR:oml01009]
 HAD phosphatases
  Other HAD phosphatases
   112136451
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     112136451
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 FHA
Other DBs
NCBI-GeneID: 112136451
NCBI-ProteinID: XP_024113926
Ensembl: ENSOMEG00000006646
UniProt: A0A3B3D7P6
LinkDB
Position
LG13:complement(24405354..24416724)
AA seq 603 aa
MSCSLVSNTGARIVLEDGRAVIVGRGPDTRVTDKRCSRHQVKLVACFAEQNVVVTQLGAN
PSFLEGQELGRGQSGKLAHGGTLYLVNQSHPFTANFSLSSNGTATNMPKRGLKVTDKTKS
AGNRRENEAQSSPTPKRSIKDFFSASPVKSSKRRLSPERDHPETKRQRRDEHSSDPAMDE
EEEERLAEEKLQQLQEFAAKSAAKESKAIEGSPSSSSANACVKSSWQQTGNLLVYTAAGV
KASDKIAGFDIDGCIITTKSGKVFPTTPDDWKILYAEIQPRLASLLKKGYKVVFFTNQLG
IAKGKLRPEVFKSKVEDILTTLQLPVQVFVATGPGVYRKPVTGMWTHLCEKANDGVAVDL
QQSFFVGDAAGRPENWAPGKKKKDFSCSDRLFALNIGLQFHTPEEFFLGWKSAPFNLPDF
NPRELDSASRLYDPPSASLTSSHTEVIVAVGYPASGKSTFFHAHIIPKGYVYVNRDTLGS
WQKCVAVCERALREGRSVAVDNTNPDLESRKRYVDVAKAAGVSCRCFHFSASLELAKHNN
RFREMVPSDIKHAKVNDMIFHSYKKHFVAPALSEGFSEILQIHFVPDFKDRQSEVLFRQF
SEG
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgtcctgctcgttagtcagcaacactggagctcggattgtgctggaggacggacgcgct
gtgattgtaggccgaggtccggacaccagagtcaccgacaagagatgctccaggcaccag
gtgaagctggttgcgtgttttgcagagcagaatgttgttgttactcagctgggtgcaaat
cccagtttccttgaaggacaggagttgggtcgaggtcagtctggaaagctagcccatgga
ggcactctctacctggttaaccagagccatccgtttactgccaacttctccctgagctcc
aacggaaccgcgaccaacatgcccaagagaggcctgaaagtgacggacaagaccaaatcg
gcgggaaaccgcagagaaaatgaggctcaatccagtccgacacccaaacgcagcatcaaa
gatttcttttctgcctctcccgtgaagtcatctaaaagacgtctgagcccagaaagagac
caccctgagacaaagcgacaaagaagagacgagcacagctccgatccagcgatggatgag
gaagaagaggagaggctggctgaggaaaagctgcagcagctgcaggagtttgccgctaag
tctgcggcgaaggagagcaaagccatcgagggctcaccctcttcatcctcggcaaacgcc
tgtgtgaagagcagctggcagcagactggaaacctgctggtttacaccgctgcaggagtc
aaagcaagtgacaagattgctggttttgacattgatggatgcatcatcacaaccaaatca
ggcaaagtctttcctaccacaccggatgactggaagattctatacgcagagattcaaccc
aggttggccagtttgctcaagaaaggatacaaggtggtgttcttcaccaaccagctcggc
atcgccaaaggcaaactgaggccggaggtgttcaaatccaaagtggaggacatcctgacc
acgctgcagctgccagtgcaggtgtttgttgcaaccggtccaggagtctacaggaagccg
gtgacggggatgtggacccacctgtgtgagaaggctaatgatggcgtggctgttgacctc
cagcagagtttttttgtcggagatgctgcagggaggccagagaattgggctcccggcaag
aaaaagaaagatttctcctgcagtgaccgtttgttcgctttgaacattggactgcaattc
cacacccctgaggaattctttttaggctggaagagcgcccccttcaacctgcctgacttc
aaccctagggagcttgactccgcctccaggctgtatgacccgccgtccgcttccctcacc
tccagtcacacagaagtcattgttgccgttggttaccccgcatccggtaaatccaccttt
ttccacgcccacatcatcccaaagggttacgtctatgtcaacagggacaccctgggctcc
tggcagaaatgcgtggcggtgtgcgagcgcgctctcagggaggggcgcagcgttgccgtt
gacaacaccaacccagacctggagtcgcgcaaacggtatgtggacgtagctaaagcagcg
ggggtgtcctgtcgttgtttccacttctctgcttctctggagctggccaagcacaacaac
agattccgggagatggttccatctgacatcaaacacgccaaggtcaatgacatgatcttc
cacagttacaagaaacacttcgtggctcccgctctttccgaaggattctcagagattctc
cagatccatttcgttccagacttcaaagacagacagtcggaagttctgttccgccagttt
tccgagggctga

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