Oryzias melastigma (Indian medaka): 112136523
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Entry
112136523 CDS
T07439
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112136523 (snx13)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112136523 (snx13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
112136523
NCBI-ProteinID:
XP_024114027
Ensembl:
ENSOMEG00000000399
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All DBs
Position
LG11:complement(9391093..9416790)
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AA seq
979 aa
AA seq
DB search
MMVKVCQLRVSTLQHIQASLSIWGWGGLGVVLFFVTFGPFAIFYLAFYIFCFIGGGFAVT
LLYGKINSEKHLEKCEHSYLPPTQPGILKTLDEMKLELKPIKIDRRLTGSSFIDEPLQQV
IQFALRDYIQYWYYTLSEDESFLLEIRQTLQNALIQFSTRSKEVDWQPYFTTRLVDDFAT
HLRVFRKAQDRLAEREDKQRDITEELVDSFFEAEVEMERKVCRDMVCTSHKDEEGFLRDL
CELLLYLLLPPGDFHNKNMRYFLREVLACGVLLPLINQLSDPDYINQFVIWMIRDSSCNY
EAFMNILKLTDKPAELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETR
IQRLQSGKEVDALKLAANFGKLCVIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVE
GYRVTAQQQLEAMLSWQKDGKKQPSATKGLLKAAALGVYEQYLSEKASPRVQVDKALIAK
LGEKLQNDDPTPEIFDEIQRKVYDMMLRDERFYPAFKQSPLYVRMLAELDMLKEPSYRGS
DDGEGESFNGSPTGSLNLSLDDYSNSCHEDFLQLQAFISDTADTCFPGLWGAAGVCNDHG
KTYALYTITVFRRNSDGNEDCWITYRRYSDFHDFHMRITEQFENLASILKLPGKKTFNNM
DRDFLEKRKKDLNAYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVN
PLRSSIKNVSTAVKSLPDSLAEGMTKVSDNMGRMSERIGQDFKQSVLKVPPLVPKSDIDP
EHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTIN
RKIVDHVDYLTSPEQVAEYVKKFRDSYWPNGILAESPPRRDKSIRMRTRVAAKTSLLGIM
PDELKHIIGAETTRKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHS
RSPRIHRYNQKLKCPSSKR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgatggtaaaagtctgtcagcttcgagtttctacgttacaacacatacaggccagtctg
tccatctggggatgggggggtcttggagttgtgctattttttgtcacctttggacctttc
gccatattctacctggccttttacatcttctgcttcattggagggggatttgcggttaca
ttgctttacgggaagataaactcagagaaacacttggaaaagtgtgaacattcatacttg
ccacctacacaacctggtattctgaagacacttgatgagatgaagctggagttaaagcct
ataaagattgacaggagactgactggctccagtttcattgatgagccactacagcaggtg
atccagtttgcactgagagactatattcagtactggtactacactctgagtgaagacgag
tcgttcctgctggagatcagacaaacactgcagaatgccctcatccagttctccacacga
tcaaaagaagtggactggcagccttacttcactacacgcctggtggacgactttgccaca
catctacgtgtcttcagaaaagcacaggatcgcctcgctgagagggaggacaagcaaagg
gacataacagaagaactggtggactccttctttgaggccgaggtggagatggagaggaag
gtgtgtcgagacatggtgtgcacctcacacaaagatgaagaaggttttcttcgggacttg
tgtgagttacttctctatcttttactacctcctggagacttccacaacaaaaacatgaga
tattttttgagggaggttctagcgtgtggcgtgctgcttcctctgatcaaccagctgagc
gacccagattacatcaaccagtttgtcatctggatgattcgggactccagctgtaactat
gaagccttcatgaacattctgaagctaacagacaagcctgctgagctggaggcagttaaa
gacaaagttctggaagagctgcagtacctgcgctctctggacaccgctggagatgacatc
aatgtgatcaagaaccagatcaacagtcttctgtttgtgaagaaggtgtgtgagaccagg
atccagagactccagtctggaaaggaggtcgacgccttgaaactggccgccaacttcggg
aagctgtgtgtgatccctctagatcacatcctcgtccataacattgcactgcagttcttt
atggactttatgcaggcggcgggggctcaggcggagctgttcttctggctcactgttgag
ggctacagggtgacggcccagcagcagctggaggccatgctgagctggcagaaagacggc
aagaagcagcccagcgccacaaaggggctgctgaaagctgctgccctgggtgtttatgaa
caatacctctctgaaaaggcgtctcctagggttcaggtggacaaagcattaatagcaaaa
ctgggggagaagctacaaaatgacgaccccacacctgagatttttgatgaaatccagaga
aaggtgtacgacatgatgctacgtgacgagcgcttctacccggcgttcaagcagagccct
ctgtacgtgcgcatgctggcagagctggacatgctgaaagagccgagctacagaggatct
gatgatggcgagggagaatcctttaacggctcgcccactggaagcttaaacctgtctcta
gacgactattcgaactcctgccatgaagactttttgcagctacaagccttcatctctgac
acggctgatacttgttttcccggattgtggggtgctgcaggggtttgcaacgatcacggt
aagacctacgcgctgtacaccatcaccgtgttcaggcgcaactctgacggcaacgaggac
tgctggataacgtaccgccgctactcagacttccacgacttccacatgagaatcactgaa
cagtttgagaacttggcgtcgatcctcaaacttccaggaaagaaaaccttcaacaacatg
gacagggacttcttggagaagagaaaaaaagatctgaatgcttatcttcagttgctgcta
aacccggagatggtcaaagcctgcccaacactcattccttatgtctatgacttcctggag
aacaaagcttacagtaaaggcaaaggagaatttgcacgcaagatagacacctttgtaaat
cccctgcggagctccataaagaatgtatccactgcagtgaaatctctgcctgacagtctg
gctgagggaatgaccaaagtctctgacaacatgggtcgcatgtcggaacgaatcggtcaa
gactttaaacagtcagtattgaaggtgcctccactcgtccctaagtcggacattgaccca
gaacactgtagagtctctgctcagcttgatgataacgtggatgacaacatcccactgcgg
gtgatgctgctgctgatggacgaggtgtttgacctgaaggagaaaaaccagtggctgcgc
cggaacatcaagaaccttctgcagcagctgatcagagccacttatggagacactatcaac
aggaaaatagtagatcatgtagactatttgacgtcaccagagcaggtggcagaatatgtc
aagaagttcagggactcctactggcccaatgggattctggcagagagcccgccccgtcgg
gacaagagcatccgcatgaggacgcgagtggccgccaagacgagcttgttggggatcatg
ccagatgaactgaaacacatcatcggagcagaaaccaccagaaaggggatcctccgcgtc
ttcgacatgtttcagtaccagcccatgaaccggcggctggtctacgtgttcctggagggc
ttcctggagaccatgtttcctcagtacaagttccccgagctcttcgtcaagctgcactcc
cgttctccacgcatccacagatacaaccagaaactcaaatgcccctcatcgaagaggtga
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