KEGG   Oryzias melastigma (Indian medaka): 112136523
Entry
112136523         CDS       T07439                                 
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
  KO
K17925  sorting nexin-13
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:oml04990]
    112136523 (snx13)
Domain-containing proteins not elsewhere classified [BR:oml04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   112136523 (snx13)
SSDB
Motif
Pfam: PXA Nexin_C PX RGS Rep3_C
Other DBs
NCBI-GeneID: 112136523
NCBI-ProteinID: XP_024114027
Ensembl: ENSOMEG00000000399
LinkDB
Position
LG11:complement(9391093..9416790)
AA seq 979 aa
MMVKVCQLRVSTLQHIQASLSIWGWGGLGVVLFFVTFGPFAIFYLAFYIFCFIGGGFAVT
LLYGKINSEKHLEKCEHSYLPPTQPGILKTLDEMKLELKPIKIDRRLTGSSFIDEPLQQV
IQFALRDYIQYWYYTLSEDESFLLEIRQTLQNALIQFSTRSKEVDWQPYFTTRLVDDFAT
HLRVFRKAQDRLAEREDKQRDITEELVDSFFEAEVEMERKVCRDMVCTSHKDEEGFLRDL
CELLLYLLLPPGDFHNKNMRYFLREVLACGVLLPLINQLSDPDYINQFVIWMIRDSSCNY
EAFMNILKLTDKPAELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETR
IQRLQSGKEVDALKLAANFGKLCVIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVE
GYRVTAQQQLEAMLSWQKDGKKQPSATKGLLKAAALGVYEQYLSEKASPRVQVDKALIAK
LGEKLQNDDPTPEIFDEIQRKVYDMMLRDERFYPAFKQSPLYVRMLAELDMLKEPSYRGS
DDGEGESFNGSPTGSLNLSLDDYSNSCHEDFLQLQAFISDTADTCFPGLWGAAGVCNDHG
KTYALYTITVFRRNSDGNEDCWITYRRYSDFHDFHMRITEQFENLASILKLPGKKTFNNM
DRDFLEKRKKDLNAYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVN
PLRSSIKNVSTAVKSLPDSLAEGMTKVSDNMGRMSERIGQDFKQSVLKVPPLVPKSDIDP
EHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTIN
RKIVDHVDYLTSPEQVAEYVKKFRDSYWPNGILAESPPRRDKSIRMRTRVAAKTSLLGIM
PDELKHIIGAETTRKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHS
RSPRIHRYNQKLKCPSSKR
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgatggtaaaagtctgtcagcttcgagtttctacgttacaacacatacaggccagtctg
tccatctggggatgggggggtcttggagttgtgctattttttgtcacctttggacctttc
gccatattctacctggccttttacatcttctgcttcattggagggggatttgcggttaca
ttgctttacgggaagataaactcagagaaacacttggaaaagtgtgaacattcatacttg
ccacctacacaacctggtattctgaagacacttgatgagatgaagctggagttaaagcct
ataaagattgacaggagactgactggctccagtttcattgatgagccactacagcaggtg
atccagtttgcactgagagactatattcagtactggtactacactctgagtgaagacgag
tcgttcctgctggagatcagacaaacactgcagaatgccctcatccagttctccacacga
tcaaaagaagtggactggcagccttacttcactacacgcctggtggacgactttgccaca
catctacgtgtcttcagaaaagcacaggatcgcctcgctgagagggaggacaagcaaagg
gacataacagaagaactggtggactccttctttgaggccgaggtggagatggagaggaag
gtgtgtcgagacatggtgtgcacctcacacaaagatgaagaaggttttcttcgggacttg
tgtgagttacttctctatcttttactacctcctggagacttccacaacaaaaacatgaga
tattttttgagggaggttctagcgtgtggcgtgctgcttcctctgatcaaccagctgagc
gacccagattacatcaaccagtttgtcatctggatgattcgggactccagctgtaactat
gaagccttcatgaacattctgaagctaacagacaagcctgctgagctggaggcagttaaa
gacaaagttctggaagagctgcagtacctgcgctctctggacaccgctggagatgacatc
aatgtgatcaagaaccagatcaacagtcttctgtttgtgaagaaggtgtgtgagaccagg
atccagagactccagtctggaaaggaggtcgacgccttgaaactggccgccaacttcggg
aagctgtgtgtgatccctctagatcacatcctcgtccataacattgcactgcagttcttt
atggactttatgcaggcggcgggggctcaggcggagctgttcttctggctcactgttgag
ggctacagggtgacggcccagcagcagctggaggccatgctgagctggcagaaagacggc
aagaagcagcccagcgccacaaaggggctgctgaaagctgctgccctgggtgtttatgaa
caatacctctctgaaaaggcgtctcctagggttcaggtggacaaagcattaatagcaaaa
ctgggggagaagctacaaaatgacgaccccacacctgagatttttgatgaaatccagaga
aaggtgtacgacatgatgctacgtgacgagcgcttctacccggcgttcaagcagagccct
ctgtacgtgcgcatgctggcagagctggacatgctgaaagagccgagctacagaggatct
gatgatggcgagggagaatcctttaacggctcgcccactggaagcttaaacctgtctcta
gacgactattcgaactcctgccatgaagactttttgcagctacaagccttcatctctgac
acggctgatacttgttttcccggattgtggggtgctgcaggggtttgcaacgatcacggt
aagacctacgcgctgtacaccatcaccgtgttcaggcgcaactctgacggcaacgaggac
tgctggataacgtaccgccgctactcagacttccacgacttccacatgagaatcactgaa
cagtttgagaacttggcgtcgatcctcaaacttccaggaaagaaaaccttcaacaacatg
gacagggacttcttggagaagagaaaaaaagatctgaatgcttatcttcagttgctgcta
aacccggagatggtcaaagcctgcccaacactcattccttatgtctatgacttcctggag
aacaaagcttacagtaaaggcaaaggagaatttgcacgcaagatagacacctttgtaaat
cccctgcggagctccataaagaatgtatccactgcagtgaaatctctgcctgacagtctg
gctgagggaatgaccaaagtctctgacaacatgggtcgcatgtcggaacgaatcggtcaa
gactttaaacagtcagtattgaaggtgcctccactcgtccctaagtcggacattgaccca
gaacactgtagagtctctgctcagcttgatgataacgtggatgacaacatcccactgcgg
gtgatgctgctgctgatggacgaggtgtttgacctgaaggagaaaaaccagtggctgcgc
cggaacatcaagaaccttctgcagcagctgatcagagccacttatggagacactatcaac
aggaaaatagtagatcatgtagactatttgacgtcaccagagcaggtggcagaatatgtc
aagaagttcagggactcctactggcccaatgggattctggcagagagcccgccccgtcgg
gacaagagcatccgcatgaggacgcgagtggccgccaagacgagcttgttggggatcatg
ccagatgaactgaaacacatcatcggagcagaaaccaccagaaaggggatcctccgcgtc
ttcgacatgtttcagtaccagcccatgaaccggcggctggtctacgtgttcctggagggc
ttcctggagaccatgtttcctcagtacaagttccccgagctcttcgtcaagctgcactcc
cgttctccacgcatccacagatacaaccagaaactcaaatgcccctcatcgaagaggtga

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