Oryzias melastigma (Indian medaka): 112136540
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Entry
112136540 CDS
T07439
Symbol
lmna
Name
(RefSeq) lamin
KO
K12641
lamin A/C
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04210
Apoptosis
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112136540 (lmna)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112136540 (lmna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112136540 (lmna)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
112136540 (lmna)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
TPR_MLP1_2
FKBP15
M
DUF5538
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
112136540
NCBI-ProteinID:
XP_024114059
Ensembl:
ENSOMEG00000020229
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All DBs
Position
LG16:complement(24835224..24877881)
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AA seq
634 aa
AA seq
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METPSQKRTMRVMSPARITRLQEKEDLCNLNDRLAVYIDKVRSLEAENAGLRLRISESES
LVTRDLSGIKAAYENELADARHALDQVAKEKARLQLDLGKIREEHKELKARNTKKELDLE
AALARLRDLEALLNSKDAALSTALGEKRTLEAELKDLKAQLAKLDINLADAKKQLQDEML
RRVDAENRLQTIKEELEFQKNIYNEELRESKRRCESRMVEIDCGRQQEFESKLAAALTEL
RAQHEEQVGLYKEELEKTYNSKLENARSSAERTTSLVGAAHEELQQTRTRLEGVTLQLSQ
LQKQLSASEAKVRELEETMSRERDLMRRRLEDKDREMADIRARMQLQLDEYQELLDIKLA
LDMEISAYRKLLEGEEERLRLSPSPTSTKVTVTRSAGSSHASRLLHSSAVASSSRTSSGA
SSTKKRRLNDSEASSMVGGTVVKSHISQQASASGRIMVNEVDLEGKFIRLSNKSDEDQSL
GGWQVKAQVGDGDPITYKFPSKFSLKGGATVTIWAAAGGGTHNPPTDLVWKNQNSWGSGD
LLQIILVSSSGEEMAARKVTRTLFQEDEEDDETGAHSTSGEYNLRSRTVICDSCGQTSER
GGGGLAEGLVGHSLFMGTNEPRQGRVKPENCSIM
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccgagccaaaagcggaccatgcgcgtcatgtctccggcccgcatcacccgg
ctgcaggagaaggaggacctgtgcaatctcaacgaccgtctggccgtctacatcgacaag
gtgcgctccctggaggcggagaacgccgggctgcggctgcgcatctccgagtcggagtcg
ctggtgacccgcgacctgtcgggcataaaggccgcctacgaaaacgagctggccgacgcc
cgccacgccctggaccaggtggccaaggagaaggcgcgcctgcagctggacctggggaag
atcagggaggagcacaaggagctgaaggccagaaacaccaagaaggagttggacttggag
gcggctttggccagactcagggacctggaggccctgctgaactccaaagacgcggctctg
tccaccgccctgggggagaagcgaactctggaggcggagctgaaggacctgaaggcccag
ctagctaagctggatatcaacttggccgatgccaagaagcagctgcaggatgagatgctg
aggagagtggacgcagagaaccgcctgcagaccataaaggaggagctggaattccagaag
aacatctacaatgaggagctgcgcgagtccaagcggcgctgcgagtcgcggatggtggag
atcgactgcggccggcagcaagagttcgagtccaagctggcagccgctctgaccgagctg
cgagctcagcacgaagagcaggtcggcctgtacaaggaagaactggagaagacctacaac
tccaagctggagaacgcccgttcctcggctgagaggaccaccagcttggtgggagctgcc
cacgaggagctgcagcagacccggacccgtctggagggcgtgacgctccagctgagccag
ctgcagaagcagctctcagccagcgaggctaaggtgcgcgagctggaggagactatgtcc
cgggaacgggacctgatgaggcggcgccttgaggacaaagatcgggagatggcggacatc
cgagcccggatgcagctgcagctggacgagtaccaggagctgctggacattaaactggct
ctggacatggagatcagcgcctacaggaagctgctggagggagaggaggagaggctgcgt
ctgtcacccagccccacttccaccaaggtcacagtgacccgctccgccggctcctcccac
gccagccgcctgctccactcctccgccgtggcgtccagcagccgcacgtcctccggcgcc
agcagcaccaagaagcggcgcctcaacgacagcgaggcgtccagcatggtgggggggacc
gtggtgaagtcccacatcagccagcaggcgtcggccagcggccgcattatggtgaacgag
gtggacctggagggcaagttcatccgtctgagcaacaagtctgacgaggatcagtctctg
gggggctggcaggtgaaggcgcaggtgggggacggcgaccccatcacctacaagttcccc
agcaagttcagtctgaagggcggagccaccgtgacgatctgggcggcggccggcggagga
acccacaacccccccaccgacctggtgtggaagaaccagaactcatgggggtccggagac
ctcctgcagatcattctcgtcagctccagcggggaggaaatggcggcgaggaaagtgacg
cgcacgcttttccaggaagatgaggaagacgatgaaacgggagctcacagcacgagcggc
gagtacaaccttcgcagccgcacggtgatctgcgactcgtgtggacagacgtcggagcgt
ggtggcgggggtctggcagaaggccttgtgggacattccctcttcatgggaaccaatgag
cccagacagggccgggtcaagccggagaactgctccatcatgtag
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