Oryzias melastigma (Indian medaka): 112136583
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Entry
112136583 CDS
T07439
Symbol
tg
Name
(RefSeq) thyroglobulin isoform X1
KO
K10809
thyroglobulin
Organism
oml
Oryzias melastigma (Indian medaka)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thyroglobulin_1
COesterase
Ephrin_rec_like
PAN_1
PAN_3
Motif
Other DBs
NCBI-GeneID:
112136583
NCBI-ProteinID:
XP_024114132
LinkDB
All DBs
Position
LG16:complement(28397387..28418379)
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AA seq
2368 aa
AA seq
DB search
MGWLLFIAGILVHCPHLLWGRASEYQLESDTQTQCQLLRGVASAKQPGDVPHCFEDGSFR
PVQCSGRSQECWCVDADGQEIPGTRTNSSSLSCPSVCQLQTRLRCSPSGLFEEIQCDSSR
GQCWCVDQDGMELYGTRQNGRPHRCPGSCQVRARRLLHSSGSPPQCAEDGSFLPVQCKFI
NMTDRSELDLLHAFNRFPEAFQTFSRFRKVFPMVSSYCFCSNSRGRELENTGVELLLSEI
PDSAFSSLRSPQSFSQTNVYRVLQRRMLGVRLAASGLFRCPSPCEEERRVAMETSSVFVP
TCESGGSFSPAQCQQGGQCWCVDPSGREVPGSRRLGPPPACGSGPSDCPTRRRRALSRLL
SAPPLQPSSRSPAASCSSLLQPLRDLLPEEADYTSFLSRLVEVLDDLFPSVGGALMALNG
SSPRFLQDELFGGDFLRNAGALNFSGAVGDRGALSLDRLSPQNPRLQQNQNLVRFISKAM
EDPAFFSVLKNTLMSSSSSASLYQVLTPLMTSCSEEEKDDAAGVFIPRCTPGGAYQEVQC
RGSQCWCVDSQGLEEEGSRVSGRPSRCPSLCERARINALKAKASMAAGVKIHIPSCSEDG
DFLPLQCVGSSCFCVDAEGRTVTPSQTAGGALTCPERVTLESSAGQIKPKGRCSDALAEV
SAFKQEVNRIISLSNSSHIPLGYGFLLAEGLRLTPEELQILQSEEELQLSEQLLSGSKAA
LPLAAFSTLQMLLPAGRRSYQHFLPQCDADGEWLHTQCSGSTGQCWCVDENGEYVSNSLK
SRSVSLPQCLSRCQRAEARFLLSDWTKASDVTSAGYRPQCEQDGRFSVLQTGGAAGWCVN
LQTGEPIQAAGRSSSGQLRCPSWCELQGRQCGADGSFIPLQCDVTSCWCVSEDGQEVAGT
RTARQTGAPPSCDRPLCPAPTITNGALVCRSAANGHQSCDLVCNRGYENSLPVSFLCDTE
SGSWNGDNKPLGGACQISQPLQTLWLSQVWSLASCSEQVRSLLFSMMTSRGLCSAQLGAS
GRSVSLCDDSSVSLQCDGPPTLKVSWSAALADLPTSDLPDLQDVALFLNESRLLDGVRRL
LRDLGSTMTSQPRLVSMTTPSFGCSRGYRLDSDGNGCVVCPAGSFFQEGACLLCPEGTYQ
AEEGRDFCNSCPRGSSPAGASSVDQCETECERRSLRCSQAGDFLPAQPDLLTSRWSCFSR
EGEELEWTSSSKMLTDDDCSVLSRFQEVPGSELTAAEDTDVLQTLTSDLLTCIHACAAEP
SCHHVALFSSRCELYSTDRINTLCNASQPSKGFLGNPEAERYDWLSCSVKVRGVASDLLV
LRKRGEELSLQLQQKTFTRMRMTKALSGVFRTQVFSSRRTSLSDAHRFCQDGCSRHECCD
GFVLHQNSLEGGSLLCGWLRSPSVLSCQDGDWDVTGQGSANRICGAGLNYNKEKSGFLFD
FGGQTFTISDYALPADSQEEMLHQASIVSFQAVYLSSGSSCAAADLRPPLDGSLQQKFEA
LSGDAVVVDPQRKLPVLSFWLNKQNYDSQQALLWCLARCDEEQLCAVADLADADSAGFFS
CSLHPDSRVCGAYDMPPTQPCPPLMDSPPTNAFSKKVDLSGPVQNFYERVPFQRSVSNAV
LSRAVMSEDTPLSQGFRDCERRCDEDPCCRGFGFVGYNKSPGLVCLVLVSLGVQTCSEDD
STWRSRDCSPTEAKTSPYPFGWYQKPVNQWTSSPALCPPLSLPETSDNVSSDDWRLLPDS
LVLVDPSLSTYDVLHVSRDVAADENRTRDWCLHACWEAESCVAVSLREAESATRCILYPD
TTICGLSSSSASSCQLVIREPASQVYLRTERTPSVTSVSVPGHGMLKGVSVETTVGSDRR
TVIQFLGVPYARPPIGMLRFEAAQPADWRGTWDASKPRPSCVQPGDGESSGSSEDCLYLN
VFTPAARRGRVPVLVFFFNPSANESPGLLDGSALAATGNIVVVTASYRTAALGFLSTGAS
GLSGNYGLTDQEAVLRWVNAHISLMGGDNSRVTVGAEQGGADILSLHLLSRPAPLFQRMM
LMGGSVFSPSLVQSAASSRRRALDLAQELGCTTSDSTDEELLSCLRTAPVQVLNAAQTKL
LVTRDPFQFWSPVHEAVSPSSPLHRVDLLLGTSEADGLISRARRIKEFEVLPGQVDDSMP
FYQALSRVLGGANGNQLLREAVASLDHNPSAAGYSLFSRALNNATRDLFIICPALRMAGL
WADSRASVFLYHQPAADAADRTDSPVPWDVQLAFGAPLHPQSSQRFTSSDRRLSLGAMSY
VSSFIRTGNPNPWPEWAESVLPRWQPVTSSKAPPSYMELSPALRPQQGLSRDFCSPWGQL
VSRLSGGESGELGAEPVLTSAPSSSSQS
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atgggctggctgctcttcatcgccgggatcctggtccactgccctcacctgctgtggggc
agagcttcagagtaccagctggagtcggacacgcagacccaatgccagttgttgaggggc
gtggcctctgccaagcagccaggtgacgtcccccactgctttgaggatggcagcttcagg
cctgtgcagtgcagtgggcggagtcaggagtgctggtgtgtggatgccgacggtcaggag
attcctgggactcgaaccaacagctcctccctttcctgtccgtccgtctgccagctgcag
acccgactgcgctgctctccttctggactcttcgaggagattcagtgcgactccagcagg
gggcagtgttggtgtgtggaccaggacggcatggagctgtacgggacccggcagaacggg
aggccgcacagatgtccgggcagctgccaggtccgggctcggcggctcctccacagctcc
ggttctcctcctcagtgtgcagaggacggcagcttcctgcctgttcagtgtaagttcatc
aacatgacagacagaagcgagctggacctgctgcacgccttcaacaggttcccagaagcc
ttccagaccttcagcaggttccggaaggttttcccgatggtttcctcgtactgcttttgc
tcgaacagccgcggcagagagctggaaaatacaggtgtggagctcctcctctcagagatc
cccgactcggcattttccagtctccgctcgcctcagtccttctcccagaccaatgtctac
agagtcctgcagcggaggatgttgggagtgcgcctggctgccagcggcctcttcaggtgc
ccctccccctgtgaggaggagcgtcgggtcgccatggagacgtccagcgtgttcgtcccg
acctgtgaaagtggagggtcgttcagccccgcccagtgccagcagggggggcagtgctgg
tgtgtggacccctccggcagggaggttcctgggagccggcggctggggccccccccggcc
tgcggttctggcccctccgactgtcccacccggcggcgccgtgctctgtcccgcctcctc
tccgctcctcctctgcagccctcttcccgctcacctgcagcatcctgctcctccctcctt
cagcctctccgggacctccttccagaggaggccgattacacctccttcctgtcccgcctg
gtggaagtcctggacgacctcttcccctcagtgggcggagctctgatggccctgaatggc
tcctccccccgtttcctccaggacgagctgtttggaggagacttcctgaggaacgccggc
gccctgaacttcagcggcgccgtgggcgatcgaggagctctctctctggaccgtctgtcc
cctcagaacccccgtctgcagcagaaccagaacctggtccggttcatcagcaaagccatg
gaagaccccgccttcttctcagtcctgaagaacacgctgatgagcagctcaagctccgcc
tccctctaccaggttctgactcctctgatgacctcctgctctgaggaggagaaggacgat
gcagccggcgtcttcatcccgcgctgcacccccggtggtgcttaccaggaggtgcagtgt
cgggggtcacagtgctggtgtgtggactctcagggtctggaggaggaggggtcacgggtt
tctggtcgtccctctcgctgtccgagcctctgtgagagagcccggatcaacgccctgaag
gcgaaagccagcatggccgccggcgtcaaaatccacataccgtcgtgttctgaggacggc
gacttcctgccgctgcagtgtgtggggtcaagctgtttctgtgtggacgctgaagggagg
acggtcactccctcccagacagcagggggcgccctgacctgcccagaaagagtcacactc
gagtcttctgcaggtcagatcaaacccaaaggtcgctgctctgatgccctcgctgaagtc
agcgccttcaaacaggaggtgaaccgcatcatctctctctctaactcctcccacatccct
ctgggatatggatttttattggctgagggtcttcgtctgactcctgaggaactccagatc
ctccaatcagaggaggagctgcagctgtccgagcagctgctgagcggctccaaagctgcg
ctgccattggctgctttttccactcttcagatgctgcttcctgccggacgccgctcctat
cagcacttcctgccgcagtgcgacgctgacggagaatggctgcacacgcagtgttctggc
agcacaggtcagtgctggtgtgttgacgagaacggagaatacgtgtccaactccctgaag
agccgctctgtcagcctgccccagtgtctgagtcgctgtcagagagctgaggctcgcttc
ctgctctctgattggacgaaggcctctgatgtcaccagtgcagggtaccgcccacagtgt
gagcaggacggccgcttctccgtgctgcagacaggcggcgctgcaggctggtgtgtgaac
ctgcagaccggagagccgatccaagcagcggggcggagctcctcgggccagctgagatgc
cccagctggtgtgagctgcaaggccgccagtgtggcgccgacggctccttcatcccgctg
cagtgtgatgtcacttcctgctggtgcgtgtctgaggacggacaggaagtggccgggaca
cggacggcccggcagaccggcgctccgccatcatgtgaccgtccgctctgccccgccccc
accatcacaaacggcgcgttagtgtgtcgctcagcagccaatggccatcagagctgtgac
ctcgtctgtaaccgtggttacgagaactcacttcctgtcagttttctttgcgacactgag
agcgggagctggaacggagacaacaaaccgctgggcggggcctgccagatctctcagccg
ctgcagacgctgtggctgtctcaggtgtggtcgctggcgtcctgctccgaacaggtgcgc
tcgctgttgttcagcatgatgaccagcagggggctctgctctgcacagctcggcgcctca
ggccgcagcgtgtcgctgtgtgacgactcctcagtcagtctgcagtgtgacggaccgccc
accttgaaggtgagctggagcgccgccctcgccgacctcccgacctcggacctccccgac
ctccaggacgttgctctcttcctaaatgaaagccgacttctggacggcgttcggcggctc
ctgcgtgacctcggctccaccatgacgtcacagcctcggctggtttccatgacgacgccg
agcttcggctgttcccgtggttaccgcctggacagtgacgggaacggctgtgttgtctgt
cctgctgggagctttttccaggagggggcgtgtctcctgtgtcctgaggggacctatcag
gcggaagaggggcgggacttctgcaacagctgccccagaggctcctcccctgctggagcg
tcgtccgtcgatcaatgtgagaccgagtgtgagaggcggagcctcaggtgctcacaggca
ggtgacttcctgccagcgcagccggacctcctgaccagcaggtggagctgttttagcaga
gagggggaggagcttgagtggacctccagcagcaagatgctgacagatgacgactgctca
gttctcagcaggtttcaggaagttcctggatcagagctgacggcggcggaagacacggac
gtcctgcagacactcacctctgacctgctgacctgtatccatgcctgtgcagccgagccg
tcctgccaccatgtggcgctcttcagcagccgctgtgagctgtacagcaccgaccgcatc
aacacgctctgcaacgcgtcacagccgtccaaagggtttctgggtaatcctgaggccgag
cgatacgattggctcagctgctctgtgaaagtgaggggtgtggcctcagatctgctggtc
ctcaggaaaagaggggaggagcttagcttgcagctgcagcagaagaccttcacgaggatg
aggatgacgaaggcgctctcaggtgtgttcaggactcaggtgttctcctcgcgacgcacg
tctctgtccgacgcccaccgcttctgtcaggacggctgcagccgccacgagtgctgcgac
ggcttcgtgctccaccagaacagcctggagggaggctctctgctctgtggttggctgagg
tctccgtccgtgctgagctgccaggacggagactgggacgtgactggccagggatcagcc
aaccggatctgtggggcggggcttaactacaacaaggagaagtcgggcttcctgtttgac
tttggaggacagacgttcaccatctctgactacgcgctgccagctgacagtcaggaggaa
atgctccatcaggcctccatcgtcagcttccaggccgtctacctgagctcaggctcttcc
tgtgcggcagcggacctccgtcctcctctggacgggtcgctgcagcagaagtttgaggct
ttgtccggagacgccgtggtcgtggatcctcagaggaagcttccggttctttccttctgg
ctcaacaagcagaactacgactcccagcaggccttgctgtggtgtctcgctcgctgtgat
gaggagcagctgtgcgcggtggctgacctggcggacgccgactcagccggtttcttcagt
tgctcgctgcatccggacagtcgggtctgcggcgcctacgacatgcctcccacgcagccc
tgcccgcccctgatggacagcccgcccaccaacgccttcagcaagaaagtggatctgagc
ggacccgtgcagaacttctacgagcgggttcccttccagaggagcgtttctaacgccgta
ctgagccgagccgtcatgagcgaggacacgccgctgtctcaggggttccgggactgcgag
cgccgctgtgacgaggatccatgttgccgcggtttcgggtttgttggttacaacaaatct
ccaggtctggtgtgtctggttctggtcagtctgggcgttcagacctgcagtgaggacgac
tccacctggaggagtcgggactgcagccccacggaggccaagacctcgccgtacccgttc
ggctggtaccagaagcccgtcaaccagtggacctcgtccccggctctctgtccgccgctc
agcctgccggagaccagcgacaacgtgtcgtcggacgactggcgtctcctgcccgactct
ctggttctggtcgacccgtccctctccacctacgacgtcctccacgtcagcagagacgtc
gccgccgacgagaacaggaccagggactggtgtctccatgcctgctgggaggcggagtct
tgtgtggccgtgtcactcagagaggcggagtctgccactcgttgcatcctctaccctgac
accaccatttgtgggctgtcctccagctccgcctcctcctgccagctggttatcagagag
cccgcctcccaggtgtacctgaggacagagcgcacgccgtcggttacgtctgtttccgtt
cccggtcacgggatgctgaagggcgtttccgtggaaacaacggtgggctctgataggagg
acggtcattcagttcctgggcgtgccgtacgcccgcccgccaataggaatgctgcgtttt
gaagcggcgcagcccgcggattggagggggacgtgggacgcctccaaaccacggcccagc
tgtgtgcagcccggtgacggcgagtcttcaggctccagcgaggattgtctgtacctgaac
gtcttcactcccgccgctcggagggggcgtgtccctgtcctggtgttcttcttcaaccct
tcagccaatgagagcccagggctgttggatggctccgccctcgctgctacaggcaacatc
gtggtggtaacggcgagctacaggaccgcggcgctcggattcctcagcacaggagcttcc
ggtctctctggcaactatggactgactgaccaggaggcggtgcttcgctgggtcaacgcc
cacatctccctgatgggcggagacaacagccgggtgacagtgggggcggagcaaggcggt
gccgacatcctcagcctgcacctcctgtccaggcccgcccctctgttccagcggatgatg
ctgatggggggttctgtgttttctccctccctggtccaatccgccgcctcctccaggcgc
cgggctttggatctggcacaagaactgggttgcacgacgtccgactccacggatgaggag
ctgctgtcctgcctcagaacggcgccggttcaggttctgaacgctgctcagaccaaactg
ctggtgacccgcgacccgttccagttctggtctccagtccatgaggcggtgtccccgtcc
tcgccgctccaccgggtcgacctgttgctgggaacctcagaggcggacggcctgatcagc
cgagcgcgcaggataaaggagttcgaggttctgccgggtcaggtcgacgacagcatgccc
ttctaccaggctctgagccgcgtgctgggcggagccaacggaaaccagctgctgagggag
gcggtggcctctctggaccacaacccttcagcggccggatacagcctgttctccagagcg
ctcaacaacgccaccagagacctgttcatcatttgtccggcgctgaggatggcaggtctc
tgggccgacagcagagccagcgtcttcctgtaccaccagcccgccgcggacgccgccgac
aggaccgactcccccgttccctgggacgttcagctggcgttcggcgctcctcttcatccg
cagagctctcagcgcttcacgtcttccgaccgccgcctctctctgggcgccatgagctac
gtctccagcttcatccggaccggaaaccccaacccgtggccggagtgggcggagtcagtt
ctgcctcgctggcagccagtcacttcatctaaggccccgccttcctacatggagttaagc
cccgccctccggccccagcagggtctgagtcgggacttctgctccccgtggggccagctg
gtgtccaggctgagcggcggcgagtcaggtgagttgggggcggagcctgtcctgacctca
gcgccgtcctcatccagccagtcttag
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