Oryzias melastigma (Indian medaka): 112136647
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Entry
112136647 CDS
T07439
Symbol
tnfb
Name
(RefSeq) tumor necrosis factor b (TNF superfamily, member 2)
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04060
Cytokine-cytokine receptor interaction
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112136647 (tnfb)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112136647 (tnfb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oml04052
]
112136647 (tnfb)
Cytokines and neuropeptides [BR:
oml04052
]
Cytokines
Tumor necrosis fators
112136647 (tnfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
FilR1_middle
PBP_N
Motif
Other DBs
NCBI-GeneID:
112136647
NCBI-ProteinID:
XP_024114261
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All DBs
Position
LG16:complement(24540910..24542325)
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AA seq
247 aa
AA seq
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MVEYTAAAYDVETGVEEKMGVFVEKKRSTGWIWKILVALLLIALCLGGARLFIWFWNERP
KITSPTEQPDTPMPESSSHKTDPHHTLKQISSNSKAAIHLQGFISEDDSALKWADDVGHA
FSRGGFKLVKNEIIIPSEGLYFVYSQASFGVTCSGDGGEGTSRNPTQLSHRIKRFSDSIG
NETSVMSALRSVCQTGAQVGAGHNWYNAIYLGGVFSLNRGDRLWTETSPVSELEDDDGNT
FFGVFAL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggtggagtacacagcagcggcatacgatgtggagaccggcgttgaggagaagatgggg
gtctttgtggagaagaaaagatccacaggctggatatggaagatactggtggccctgctc
ctgatcgccctctgcttaggaggcgcccggctctttatctggttttggaatgaaaggcca
aaaataacgagtcccacagagcaaccagacacaccgatgccagaaagttcttcccacaaa
acagatcctcatcacactctgaaacaaatcagcagcaactctaaggccgccatccattta
caaggtttcatctctgaggacgactctgcgctgaagtgggccgatgacgtaggccatgct
ttctctcgtggcggcttcaaactggtgaagaatgaaatcatcattcccagtgaaggccta
tacttcgtctacagtcaggcatccttcggggtgacctgcagtggcgatggcggagaggga
acatcgaggaatcccacacagctgagccaccggatcaagcgcttctccgattctatagga
aacgaaacctcagtgatgagtgcactgaggtcagtctgtcaaaccggtgcgcaggtcggc
gccgggcacaactggtacaacgccatttacctgggcggtgtgtttagcctgaaccgaggc
gaccggctgtggacggaaaccagcccggtgtcggagctggaggacgacgacggcaacacg
ttcttcggcgtgttcgctctttaa
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integrated database retrieval system
