Oryzias melastigma (Indian medaka): 112136656
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Entry
112136656 CDS
T07439
Name
(RefSeq) DNA-binding protein SATB1 isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112136656
03036 Chromosome and associated proteins [BR:
oml03036
]
112136656
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
112136656
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112136656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Motif
Other DBs
NCBI-GeneID:
112136656
NCBI-ProteinID:
XP_024114270
Ensembl:
ENSOMEG00000003378
LinkDB
All DBs
Position
LG16:26656283..26726152
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AA seq
856 aa
AA seq
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MEHLSETCLGKENSELVNSMAEAKAPPAKLPRLEQNGSPLGRARLGSNGAKLAGVPYKPS
GHLLKTFHKRGNMLPVFCVVEHYENPMDFDSKEEHAEFVLVRKDMLFNQLIEMALLSLGY
SHSSAAQAKGMIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLEDLP
PEQWSHSTVRNALKELLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGRWY
KHFKKTKDMMGMRQPSQLEGYLGTCVLRESPRANALAEMDGLSDLSPPGSNHNHLGFSQQ
QPIPGSTAEQTPSSPVPPLPHGPPPHAGQTASRQPQLPGLHHPGLVSTPISPQLVNQQLV
MAQILNQQYAVNRLLAQQSLSQQYLNHPPVNRSSHSKPLEPQVASNTEVSSEIYQWVRDE
LKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDR
IYQEERERSLTAASAMGSAPLISTPPSRPVQPRRDDCNSIRPEDWNPRIPVGISPVKPSP
LPSEWNGKTESCILNINSTIYDEIQQEMKRAKVSQALFAKVAASKSQGWLCELLRWKEDP
SPENRTLWENLSMIRRFLSLSQGERDVIYEQESSAGQQHHGERPTHLIHLSADPLQTPPT
QTQHQPSLSLHPSQPLLSQQPLQQQQATPGPRLPPRQPSTASPAETEDEGSRGGSIKARP
SGGKISLEALGILQSFIQDVGLYPDEEAVHTLSAQLDLPKLTIIKFFQSQRFYVNHPAKL
PKETSNNNNNSSTVNNNNTNSSSSSSSPAFDEELTDFRESGELLKELDESTQTNSTIFSI
KLEEQLSRAAEAEVKE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggagcatctcagcgagacgtgtttgggcaaggagaactctgagctggtcaacagcatg
gcggaggccaaggccccgccggccaagctgccccggctggagcagaacggcagcccgctg
gggcgggcccggctgggcagcaacggggccaaactggcgggggtcccgtacaagcccagc
ggccacctgctgaagaccttccacaagagaggcaacatgctgccggtgttctgcgtggtc
gagcactacgagaaccccatggacttcgacagcaaggaggagcacgccgagttcgtcctg
gtgcgcaaggacatgctgttcaaccagctcatcgagatggctctgctgtcgctgggctac
tcgcacagctccgccgcccaggccaaaggtatgattcaggtggggaagtggaaccccgtc
ccgctgtcatacgtgacggacgcgccggacgccaccgtggccgacatgctgcaggacgtt
taccacgtggtcacgctcaagatccagctgcacagttgtcctaagctggaggacctgccg
cctgagcaatggagccactctacagtaagaaacgccctcaaggagttactcaaagacatg
aatcagagctctctggctaaagaatgtcctttatcacagagtatgatttcctccattgtg
aacagcacttactatgcaaatgtgtcggcggcgaagtgtcaggaatttgggcgctggtat
aaacatttcaagaagacaaaagatatgatgggcatgcgccaaccctcccagctggagggc
tacctggggacgtgtgttctccgtgagagcccgcgtgccaatgcactagcggaaatggac
ggcttgtccgacctctcccctcccggctccaaccacaaccacctgggcttctcccagcag
cagcccatccccggcagcaccgccgagcagaccccgtcctcgccggttcctcccctgcct
cacggcccgccgccgcacgccggccagacggcgagccggcagccccagctccccggcctg
caccacccgggcctggtgtccacgcccatcagcccccagctggtcaaccagcagctggtg
atggcacagatcctcaaccagcagtacgcggtgaaccggctgctggcgcagcagtccctg
tcgcagcagtatctcaaccacccgccggtcaaccgcagctcccacagcaagcctctggag
ccgcaggtggcgtccaacaccgaggtctcctccgagatctaccagtgggtcagggacgag
ctgaaacgggccggcatctcgcaagccgtcttcgcacgggtggctttcaacagaacccag
ggtttactgtcggagatcctccgtaaggaggaagaccccaagacggcgtcgcagtcgctg
ctggtcaacctgcgggccatgcagaacttcctgcagctgcccgaggccgagcgcgaccgc
atctaccaggaggagagggagcgcagcctcaccgccgcgtccgccatgggctccgccccc
ctcatcagcacgccgcccagccggcccgtacagccccgccgcgacgactgcaacagcatc
cggcccgaggactggaacccgcgcatccccgtgggcatttcacctgtgaaaccgtcgccg
ctgccgagcgagtggaacggcaagacggagagctgcatcctcaacatcaactccaccatt
tatgacgagatccagcaggagatgaagagggccaaagtgtcgcaggcgctcttcgctaag
gtggccgcctccaagagtcagggctggctctgcgagctgctgcggtggaaagaggacccg
tctccggagaaccggaccctgtgggagaacctctccatgatccggcgcttcctgagcctg
tcgcagggcgagcgcgacgtcatctacgagcaggagagcagcgccgggcagcagcaccac
ggcgagcggcccacgcacctcatccacctgtctgccgacccgctgcagactccgcccact
cagactcagcaccagccctccctgtccctccacccgtcccagcctctgctgtcccagcag
cccctgcagcagcagcaggccaccccgggcccacgcctgccgccccgccagccctccacg
gcctcccccgccgagacggaggacgagggcagccgagggggcagcatcaaggcgcgcccc
agcgggggcaagatctccctggaggctctggggatcctgcagagcttcatccaggacgtg
gggctgtaccccgacgaggaggccgtgcacacgctgtccgcccagctggacctgcccaaa
ctcaccatcatcaagttcttccagagccagcgcttctacgtcaaccaccccgccaagctg
cccaaggagaccagcaacaacaacaacaacagcagcacagtcaacaacaacaacacaaac
agcagcagcagcagcagcagccccgccttcgacgaggagctgacggacttcagggagagc
ggcgagctgctgaaggagctggacgagagcacgcagaccaacagcaccatcttctccatc
aagctcgaggagcagctgagccgcgccgccgaggccgaggtcaaggagtag
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