Oryzias melastigma (Indian medaka): 112136657
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Entry
112136657 CDS
T07439
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B isoform X1
KO
K03063
26S proteasome regulatory subunit T3
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112136657 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oml03051
]
112136657 (psmc4)
Proteasome [BR:
oml03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
112136657 (psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
NACHT
AAA_lid_PRS2_C
AAA_3
ATPase_2
IstB_IS21
TsaE
AAA_7
AAA_33
Parvo_NS1
AAA_18
AAA_17
AAA_25
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
112136657
NCBI-ProteinID:
XP_024114277
Ensembl:
ENSOMEG00000005164
UniProt:
A0A3B3D338
LinkDB
All DBs
Position
LG16:28666483..28673269
Genome browser
AA seq
417 aa
AA seq
DB search
MEDLVTVEKSPEEMPPVLSSRPQTGLSFLTPEPEDLEDLYSRYKKLQQELEFLEVQEEYI
KDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDR
ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAV
ELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG
EGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ
NVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE
DYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaggacttggtaacggtggagaagagtccggaggagatgccccccgtcctgagctcc
agaccccagactggcctgtccttcctgacaccagaaccagaagacttggaggatctttat
tccagatacaagaagctgcagcaagagctggagttcctggaggtgcaggaggagtacatc
aaagatgaacagaagaacctgaagaaggagttcctgcacgctcaggaggaggtgaagagg
atacagagcatccctctggtcatcggtcagttcctggaggccgttgaccagaacacggcc
atcgtgggctccaccacaggctccaactactacgtccgcatcctgagcaccatcgacaga
gagctgctgaagcccaacgcctcggtggcgctgcacaagcacagcaacgcgctggtggac
gtccttcctccggaggcggacagcagcatcatgatgctgacctcagatcaaaagcccgac
gtgatgtacgccgacatcggagggatggacatccagaagcaggaggtccgggaggcggtg
gagctgccgctcacccacttcgagttatacaaacagatcggcatcgacccccccagaggg
gtgctcatgtacggacctcctggctgtggaaaaaccatgctggccaaagccgtggcccac
cacactacagctgccttcatccgcgtggtgggctctgagtttgttcagaagtatctgggt
gaaggcccccgcatggtccgcgacgtcttccggttggctaaggagaacgctcctgccatc
atcttcatcgacgagatcgacgccatcgccacaaagcgcttcgacgctcagactggagct
gacagggaggtgcagaggatcctgctggagctgctgaatcagatggacggcttcgaccag
aacgtcaacgtcaaggtcatcatggcaacaaaccgagccgacactctggacccggccctg
ctccgaccgggccgtctggaccggaagatcgagttcccgctgccggaccgcagacagaag
cgcctcatcttctccaccatcaccagtaaaatgaacctgtccgaggaggtggacctggag
gactatgttgcccgacctgacaagatctctggagcggacatcaactccatctgccaggag
gctggcatgctcgccgtgcgcgagaaccgctacatcgtcctggccaaagactttgagaaa
gcgtacaagacggtcatcaagaaggacgagcaggagcacgagttctacaagtag
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