KEGG   Oryzias melastigma (Indian medaka): 112136704
Entry
112136704         CDS       T07439                                 
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112136704 (syf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112136704 (syf2)
Spliceosome [BR:oml03041]
 Complex B
  Other components
   Prp19-related factors
    112136704 (syf2)
 Complex C
    112136704 (syf2)
SSDB
Motif
Pfam: SYF2 AAR2_1st
Other DBs
NCBI-GeneID: 112136704
NCBI-ProteinID: XP_024114386
Ensembl: ENSOMEG00000013911
UniProt: A0A3B3C3Y5
LinkDB
Position
LG22:17892279..17898674
AA seq 238 aa
MASPVEETHTTAHDEQTDSLASQKREARLRKFRELHFKRNEARKLNHQEVVEEDKRLKLP
SNWEAKKARLEWELSEDEKKKECAARGEDYNRVKLLEITADDAERWERKKKKKNPDTGFA
GYAEAQFRQYQRLTKQIRPNLESYEKLREESGEDFYPTSNSLIHGTHVPTKDGIDRMVED
VEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq 717 nt   +upstreamnt  +downstreamnt
atggcgtcacctgttgaggaaactcacacgactgcccatgacgaacagacggactccttg
gcttctcaaaaacgggaggcgaggcttcgtaaatttcgagagttgcattttaaacggaac
gaagcccgaaaactgaaccaccaggaggttgtggaggaggataagagactgaaactgcct
tccaactgggaggctaaaaaagcccgactggaatgggagctttctgaagatgaaaagaaa
aaggaatgtgctgcccgtggagaggactacaacagagtgaaactgctagaaatcacagct
gatgatgcagagcggtgggaaagaaagaagaagaagaagaatccagacactggatttgca
ggttacgccgaggcccaattccgccagtaccagagactcacaaagcagatcagaccaaac
ttggaaagctatgagaagctgagggaagaaagcggtgaagacttctaccccacgtcaaat
agcctgatccacggaacccatgttcccacaaaggacggcattgaccgcatggtggaggat
gttgagaaacagattgaaaagcgtgctaagtacagccggcgccgtgcctacaacgacgac
gcagacatcgactatattaatgagaggaatgccaaattcaacaagaaggccgagcgtttc
tacggcaaatacacggcagagatcaaacagaacttggagagaggcaccgccgtctga

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