Oryzias melastigma (Indian medaka): 112136784
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Entry
112136784 CDS
T07439
Name
(RefSeq) desmoglein-2
KO
K07597
desmoglein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112136784
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112136784
Cell adhesion molecules [BR:
oml04515
]
Cadherins
Major cadherins
112136784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
112136784
NCBI-ProteinID:
XP_024114449
Ensembl:
ENSOMEG00000007718
UniProt:
A0A3B3BNG2
LinkDB
All DBs
Position
LG4:complement(28131684..28157986)
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AA seq
1236 aa
AA seq
DB search
MALRFSTKFGLLLLLLVIGAEARQRRTKALKRSKRDWVLPPSKLWENTDYTKKEFIAKIR
SDKSEKAPVEYYLTGPGADAPPYNLFVVDHGSGYVRVTDILDREKCQKYELKGIAKYRNQ
SLAEDNIPINIVVLDRNDNAPYLEPQKGTVKEESKKGTLVMRIKGEDADQVGTPNANLTY
TIVRQDPPGTGPMFMINKYTGDLFVRSKLDREKLSLYNLVIKVTDMEGAPGGQTGTGTVE
IKVVDINDNIPDLEKSEYTGSVEENVDNVVVMRIKSLDKDEEFTDNWLTVFKIVKGNEDN
LFSIETDKKTNEGILKLIKPVDFETVQSLDLGIQIENVAPFVNGTALELDLSLEGGQPVA
TGAGTGVGVGAGLGGGLGPGGGVKPGTGPGAGPGTGAGAGAGAGAGPGAGTGAGAGPGAG
SGAGGGAGPGTGAAAGPGTGPGGGAGSKPVKPAQSGSGPGQKPGNSKSYPIKILVKNVPE
GPAFAPSTKEIPLSEDPSKIPKDGIIAVFPAVDPDTGKIAEDVSYAKAYDPDNWFSIDEE
TAEIKLNKKPDRESPYVKNGTYICKLLAISKDMPPKTATGTIAVQVADSNDHCPTLSSTA
SGLCSDKKTVFITAFDEDAHPNADPFSFTIIPGGTKGSWDLEVINGTTAALHSQKDLWPG
VYELQVEVKDNQGLSCPSAQVFSVDVCICEGTEECNLRAAAHQRSTSVEMTAGAICLLLM
APCLMLFIPLLLISCQCGGADKVFSELFIDLDTGRADHLISYNTEGQGEDKTPPQSPLLW
QNTNGGLKAANVKTFSTAVRETHHMAGYTESMQQSHYTHPELLHREASHKYFGASHDFNI
DTRFDSRMQSTDGLAEDMTLFAVFLKDYYSEKCVPHLEDKYPAKVWNYEGQGSTTGSLSC
CSCQDMDLEFLTDLGTKFKTLAEICSPPSSTVRSSVKQTAMTALRSTSDVVKPVIKSVIE
TKPYIETKPYIETKQSNVTTEKATNVFSSSSSKVSSSYSSMTLPQSTITNIDHSSDMGYS
TLVHYPTQTVALPEPVCYNTVVQPVQYMMAPNLQNTVLLEDWSRASNLSGMVMVNGSQGL
SGPFVSGAPGSLTGLVNSNTGFLTSNSGLVTSNTGFLTSDTGLVTSNTGFLTSDTGLVNS
NTGFLTSDTGLVNSNTGFLTSNSGLVTSNTEGCVNFQSSASSVSPVGATVLLPGSPVSGE
LVSPGSVSMDSWRIMPPNSGDSYMLLSNGSLGVEED
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgcttctccacaaagtttggcctcctgctactcctgctggtgataggtgct
gaagcaaggcagagaagaacgaaggcattgaaaaggtccaaaagagactgggtcctcccc
ccatccaagctgtgggaaaacacagactacaccaagaaggagttcatcgcaaagatccgt
tctgataaaagtgaaaaagcacccgtggagtactacctcacaggtccaggagctgacgcg
ccaccctacaacctctttgtggtggatcatggaagcggatatgtccgggtcacagatatt
ctggaccgtgagaagtgccaaaaatacgaactgaaaggcattgctaaataccgcaatcaa
tcgttggcggaggataatattccaataaacatcgttgtcctggacaggaatgataacgct
ccctatcttgaaccacaaaagggaactgtcaaagaggagagcaaaaagggtactttggtt
atgaggatcaagggtgaagatgctgaccaggttggaactcctaacgcaaacctgacctac
accatcgtcagacaggacccaccaggcaccggacccatgttcatgatcaacaaatacaca
ggagacctgtttgtgaggtccaaactggacagagagaaactaagtctctacaacctggtg
atcaaagtaactgatatggaaggagcgccaggggggcagaccgggacaggaactgtggag
attaaggtggtggacatcaatgacaacatccctgacctggagaagtctgagtatacaggc
tctgtggaggaaaacgttgataacgtggttgtgatgaggatcaaatctctggacaaggat
gaggaattcacagacaactggttgactgtctttaaaatagtcaaaggaaatgaagacaat
ctcttctccattgagacagacaaaaaaaccaacgagggcatcctgaagttgatcaagcca
gtggactttgaaacggtgcagagcctggatcttggcatacaaattgagaatgtggctcct
tttgtcaatggcaccgctttggaactggatttaagcttggaaggggggcaaccagtggcc
acaggagctggaactggtgtaggggtaggtgctggactagggggaggacttgggcctgga
ggaggggtcaagcctggcactgggcctggtgctggacctggaactggtgctggggctgga
gctggtgctggtgctggacctggtgctgggactggggccggtgctggaccaggtgctgga
tctggtgctgggggtggtgctggacctggcactggggctgctgctggacctggcactggg
cctggtggaggtgctgggtcaaaacctgtaaaaccagcacagtcagggtcaggacccggt
cagaagccaggtaactccaaaagctatcccatcaagatattagtgaagaacgttccagaa
ggtccagcatttgcaccctccaccaaagagattcctctgtcagaagacccaagcaagata
ccgaaagatggtatcattgctgtttttccagcagttgatccagacacaggaaagatagct
gaagatgtcagctatgcaaaagcgtatgatccagacaactggttttcaattgatgaagaa
actgctgagatcaaactcaacaagaaacctgacagagagtctccttacgtgaagaatggg
acctatatctgcaaacttcttgcaataagcaaagacatgccccccaaaacagccacagga
accattgctgtccaagtggccgactctaacgaccactgtcccactctcagcagcactgcc
agcggtctgtgctctgacaaaaagactgtgttcatcaccgctttcgatgaagacgcccat
cccaacgcagatcccttctccttcaccatcattcctggaggaacgaagggcagctgggat
ttggaagttatcaacggaaccactgctgctctccactcccagaaagatctgtggcctgga
gtgtatgagctgcaagtggaggtgaaagacaatcagggtttgtcctgcccatccgcccag
gttttcagcgtggatgtctgcatttgtgagggaacagaggaatgtaacttgagggcggcg
gcgcaccagagatccacgtctgttgagatgacagcaggagccatttgtctgctgctgatg
gcgccgtgcttgatgcttttcattcctcttctcctgatctcctgtcagtgtggaggagca
gataaagttttctctgagctgtttattgatctggatacaggaagagcagaccacctgatt
tcatataacactgaaggccagggtgaggacaagacgcctccccagagtcctctactttgg
cagaatactaacggagggcttaaagcagccaatgtcaagaccttctccacagcagtcaga
gagactcaccacatggcaggctacacagaatccatgcagcagtcacattacacccaccca
gaactcctgcacagagaagcatctcacaagtattttggggccagtcatgacttcaacatt
gacaccaggtttgatagccgcatgcagagcacagatggtctggctgaggacatgacttta
tttgcagtttttttgaaggactactactcagagaaatgtgtgcctcatttggaagataaa
taccccgctaaagtgtggaactacgagggccaggggtcgaccactggctctttgagctgc
tgtagttgtcaggacatggacctggaattcctcactgaccttggaacaaagttcaagact
ctagctgagatttgctcccctccttcatcaacagtcaggtcctctgtgaaacagacagca
atgactgctctcagaagcacgtctgatgtggttaaaccagttattaagtctgttattgaa
acaaagccttatattgaaacaaagccttatattgaaacaaagcagtccaatgtaaccaca
gagaaagctacaaatgtcttttcttcatcttcaagcaaagttagcagctcctattcctcc
atgactctccctcagtctacaatcacaaacattgaccattcctctgacatggggtattct
actttggtgcattatcccactcagacagtcgccctgccggaaccagtttgctacaacact
gttgtgcaacctgtacagtacatgatggcaccgaatttacagaacacggtcttgcttgag
gactggtctcgtgcaagcaatctttccggcatggttatggtcaatggttcccagggtcta
tctggaccttttgtcagtggagctccaggctctcttacagggttggttaactcaaacact
gggtttcttacctcaaactcagggttggttacctcaaacacggggtttcttacctcagac
acagggttagttacctcaaacacgggatttcttacctcagacacagggttagttaactca
aacacagggtttcttacctcagacacagggttagttaactcaaacacagggtttcttacc
tcaaactcagggttggttacctcaaacacagagggctgtgtgaactttcaaagttctgcc
agttctgtaagtccagttggagccacggtactgctgcctggttccccagtgtctggagaa
cttgtgtccccaggatctgtctctatggacagctggagaataatgccaccaaattccggt
gacagctacatgttactctctaatggttcacttggggtagaagaagactga
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