Oryzias melastigma (Indian medaka): 112136786
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Entry
112136786 CDS
T07439
Name
(RefSeq) desmoglein-2 isoform X3
KO
K07597
desmoglein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04382
Cornified envelope formation
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112136786
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112136786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112136786
Cell adhesion molecules [BR:
oml04515
]
Cadherins
Major cadherins
112136786
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
112136786
NCBI-ProteinID:
XP_024114451
Ensembl:
ENSOMEG00000007667
LinkDB
All DBs
Position
LG4:28168817..28208583
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AA seq
1188 aa
AA seq
DB search
MVRVFQSALVVLVLVQVVIVVRQTSGKNLVRKKREWTLPRKPLKENKDYTRELSIAKICF
DFQQDQKVEYYLEGHGASQKPFNVFVVNHETGVVRVTKILDREEVDTYVIKVIAKYANGL
DAARPVELRIKVEDENDNDPVFPETLSVSVYELRPRGTFVVQVNATDADEPGNKNSELAY
SLISQNPPHDMFSINKSGMISVKNPNLDRERCAQYSLTVQAKDLYGEDGGRTATGVIIIN
VLDVNDNLPTLEKLQYDGSIEENTHNVEVMRLKSNDDDLEGTDNWEAVYEIVKGNDAGYF
NIVTDPKTNEGILMLVKPVDYEDVKDLDLGIIVKNKAPPFDPSAVINGADVNIGGGAIGA
SGASGASGASGASGASGTNGASGATGSGGATGSGGPTGSGGPTGSGGATGASGSSGGSTG
TSGGSGSIKYTSYPVKINVKNKPEGPGFEPQVKNIPISEGLDPANLKKPIATYTAIDKDT
GKPAKNVRYLKGPDPGNWLSIDPETAEITLTKIPDRESPYLINGTYFANVLCISEDMPDK
TATGTIAIKVEDTNDNCPTLTTNSKVICLPEDSFIVNGEDKDSFPNGPPLHFVIVPEKTQ
GDWKVEHLNDSAVIVRAQKELWPDSYTVEMVVSDQQGLSCKDPQKMEIVACTCHDGVVCG
ALGGQGQSRKDITLGPAAIGLMLLGLLLLLLIPLLLLSCMCGSVGNFQDIFSSIPYGTEE
MLIKYHTEQNGENTEIPLLNTPGYLLVDSAKGHFAAAPAELQQSFVAGNELGTLRGYRET
GTMFSDGQWQMNQWGSGLLSASEVQEFGQGGEGNLALPDSYLRDYYDQRTSINRSDAVKD
SLLVFNNEGEGSLAGSLGSCSMLEQDGDLQFLDDLEIKFKTLAEICGGKTVVSETKAVSI
PPPVASVAMPKLSESTFESNMVTTQRVAPPPSLPPTTIREERTVVTDTTDHSKVLREDAA
MLSEGMTSMATGMGGQSQMLVLQQQQQPVYYTAAPMLQPMQYVVQPQFQNAVILTEAPAA
GLQDVVLLNGSDIGSNPGMIIQGQTMMHSGHAQGTGTMLLENGSNLLHMGNLSGSQAMMV
VDGTVAGSATGVQGTLIQGGSLGSATGVQGTLIQGGSLSSGQHSGTQRVVRVEEATSGRG
RAGKSGRSSLQRIVSTKGSTQTSTSSTSLSTPTNTTQKVLIQETRQIR
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggttttccagtccgcgctcgtggttctggttttggtacaagttgtgattgtg
gtcagacaaacttctgggaagaatctggtgagaaaaaaaagagaatggactcttcctcga
aaacccttaaaggaaaataaagactacactagagaattatccatcgccaagatttgcttc
gatttccaacaggaccaaaaggttgagtattacttggagggtcatggtgcaagccagaaa
cccttcaacgtgtttgtggtcaaccacgagactggagttgtccgtgtgaccaaaatcctt
gacagggaggaagtagacacatatgttattaaagttatcgccaaatatgctaacggttta
gatgctgcaagaccggttgaactaagaatcaaagttgaggatgaaaatgacaacgacccg
gtctttccagaaacactatctgtgagcgtgtatgagctcagacctagaggaacatttgtt
gtgcaagtgaacgcaaccgatgcagatgaaccaggcaacaaaaattcagaacttgcctac
agcttaatcagtcagaatccaccgcatgacatgttcagtattaacaagagcggaatgatc
agtgtgaagaatcctaacctggacagagaaagatgtgcacaatactctctgacggttcaa
gctaaagacctctatggagaagatggaggaaggacagcaacaggcgtcatcatcatcaat
gtcttggacgtgaacgacaaccttccaactctggagaaattgcagtatgacggaagcatt
gaagaaaacacacataatgtggaggtgatgaggctaaaatcaaatgatgatgatttggag
ggcacagataactgggaggctgtgtatgaaatcgtgaagggcaacgatgccggatatttc
aacatagtgactgacccgaagaccaacgaaggaatcctaatgctggtcaagccggtggac
tacgaagatgtgaaggacctcgacctcgggatcatagtgaagaacaaggctccccctttt
gatccatctgcagtcattaatggagcagatgtaaatattggaggtggtgccattggagcc
agcggtgccagcggtgccagtggtgccagcggtgccagtggagccagtggtaccaatggt
gccagtggagccaccggttccggcggagccaccggttccggcggacccaccggttctgga
ggacccaccggttctggcggagccaccggtgccagcggatcctccgggggttccaccggt
accagtggaggttcgggatcaataaaatataccagttatcccgtcaaaataaatgttaaa
aacaagccggagggaccaggttttgaacctcaagtcaagaacattccaatctcagaagga
ttggacccagccaatttgaaaaaaccgatcgccacttacactgcaattgataaagacact
gggaaacctgccaagaatgtcaggtatttgaagggtccagatccaggcaactggctaagc
atcgacccagaaacagctgagatcaccctgaccaagatacctgaccgggaatctccatac
cttattaatgggacttactttgccaatgtactatgcatttcagaggacatgcctgataaa
acagccactggtaccatcgccatcaaggtggaggatacgaacgacaactgccccaccctg
accaccaacagcaaggtgatctgcctcccagaggacagcttcattgtcaacggtgaagat
aaagactcgttcccaaacgggcctcctttgcattttgtgatcgtccctgaaaaaacccag
ggagactggaaggtagaacatctcaatgactctgcggtcattgtgagggctcagaaggag
ctttggcccgattcatacacggtggagatggttgtgtcagaccagcagggattaagctgt
aaagacccacagaagatggaaattgtggcatgcacttgccatgatggtgtggtgtgtgga
gcacttggaggccagggtcagtcaagaaaagatataacgcttggacctgctgcaattgga
ctcatgctgctgggattgctgttgttactgctcattcctctgctgctgctttcctgcatg
tgtggctctgttggaaattttcaagacatttttagcagtataccttatggcacagaagaa
atgctcatcaagtaccacacggagcaaaatggagagaacacggagattcctcttttgaac
acaccaggatatctgctcgttgactcagcaaaaggtcactttgcagcagcacctgcagag
ctacagcagtcgtttgtggccggaaacgaacttggcactctgaggggctacagagagaca
ggaaccatgtttagcgatggacagtggcagatgaaccagtggggcagtggcctgttatca
gcgtcggaggtccaagagtttggacaagggggagagggaaaccttgcactgccagattcc
tacctcagagactactacgatcagaggacgtccataaaccgttccgatgcagtgaaggac
agcctgctggtcttcaacaatgagggggagggttcccttgcaggctcgttgggcagctgc
agcatgctggagcaggatggagacctccagtttttggacgatcttgaaataaagttcaag
actctagctgagatttgtggaggcaaaacggtggtgtctgaaaccaaagcagtgtccatt
cctccacccgtcgcctctgtagccatgcctaagctctctgagtcaaccttcgagtcaaac
atggtgaccacacaacgcgtggcccctccacccagtctgccaccgaccaccatcagagaa
gaacgaaccgtggtcaccgacacaaccgaccattccaaagtgctgagggaggatgcggct
atgctaagcgagggcatgacctctatggcaacagggatggggggccagagccaaatgctg
gttttgcagcagcagcagcagccggtctactacactgccgcccccatgctgcagcctatg
cagtacgttgtccagccgcagtttcagaacgccgtcatcctgaccgaagctccagccgcc
ggcctccaagatgtagttctgcttaacggctctgacatcggatccaacccaggaatgatc
attcagggtcagacaatgatgcacagcggacacgcccagggcaccggcaccatgctgctg
gagaacggcagcaacctgctgcacatgggaaatctgtctggctcccaggctatgatggta
gtcgacgggacagttgcaggctctgcgactggagtccaaggcaccctcatccagggagga
tctctgggctcggcgactggagtccaaggcaccctcatccagggaggatctctgtcatca
ggacagcattcaggaacccagagagttgtgagggtggaggaagcaaccagcggcaggggg
agggcggggaagagtgggcgttcgagtcttcaaagaatcgtcagcactaaaggcagcact
cagaccagcacttcctccacttcactcagtacccccaccaacaccactcagaaagttctg
atccaagaaaccagacaaattcgctga
DBGET
integrated database retrieval system